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The map label for this gene is nirD [H]

Identifier: 91783602

GI number: 91783602

Start: 2472620

End: 2472991

Strand: Direct

Name: nirD [H]

Synonym: Bxe_A2213

Alternate gene names: 91783602

Gene position: 2472620-2472991 (Clockwise)

Preceding gene: 91783601

Following gene: 91783603

Centisome position: 50.5

GC content: 64.25

Gene sequence:

>372_bases
ATGAACAACGATCGCCTGCCACGCTCCTGGACGCCCGTTTGCCAGCTCGACGACATCGTGCCTAACACGGGCGTTTGCGC
GCTCGTCAACGGCGAGCAGGTGGCGGTTTTTCACGTGACCAACGGCGCCGGCGATGACAACGGTGACGCTACCGCCACCG
TCTACGCGATCGAAAACTTCGACCCGGGCTCGCAGGCGGCAGTGCTCTCGCGCGGGCTGATCGGCAGCCTTGGTGAACGC
GTCGTGGTCGCCTCGCCGATCTACAAGCATCACTTCGACCTACGAACCGGCGAATGCCTGGAAACACCGGCGTATTCCGT
CGACGCGTTCGCCGCGCGAGTGGAAAACGGCCAGGTGTGGGTCGCCGTCTGA

Upstream 100 bases:

>100_bases
GGCCGGCCACGCCCGCCGAGCGACGCTCGAAGCTCGCCGCGATTCCCGTGGTCGCCGAAACCGTCTGATTGATCCGCACC
ATTCACCGAGGACTTCCGTC

Downstream 100 bases:

>100_bases
GCGGCTGATCGTCTGAAACCTTTTCGAACCAAGTTGCCCGCCATGTCCTCCACCAGTGTAAAAACCGTGTGCCCCTACTG
CGGCGTTGGCTGCGGCATGG

Product: putative ferredoxin subunit of nitrate/nitrite reductase (NADPH)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNNDRLPRSWTPVCQLDDIVPNTGVCALVNGEQVAVFHVTNGAGDDNGDATATVYAIENFDPGSQAAVLSRGLIGSLGER
VVVASPIYKHHFDLRTGECLETPAYSVDAFAARVENGQVWVAV

Sequences:

>Translated_123_residues
MNNDRLPRSWTPVCQLDDIVPNTGVCALVNGEQVAVFHVTNGAGDDNGDATATVYAIENFDPGSQAAVLSRGLIGSLGER
VVVASPIYKHHFDLRTGECLETPAYSVDAFAARVENGQVWVAV
>Mature_123_residues
MNNDRLPRSWTPVCQLDDIVPNTGVCALVNGEQVAVFHVTNGAGDDNGDATATVYAIENFDPGSQAAVLSRGLIGSLGER
VVVASPIYKHHFDLRTGECLETPAYSVDAFAARVENGQVWVAV

Specific function: Required for activity of the reductase [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis nasE [H]

Homologues:

Organism=Escherichia coli, GI1789766, Length=111, Percent_Identity=42.3423423423423, Blast_Score=93, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012748
- InterPro:   IPR017881
- InterPro:   IPR017941 [H]

Pfam domain/function: NA

EC number: =1.7.1.4 [H]

Molecular weight: Translated: 13101; Mature: 13101

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDRLPRSWTPVCQLDDIVPNTGVCALVNGEQVAVFHVTNGAGDDNGDATATVYAIENF
CCCCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEEECC
DPGSQAAVLSRGLIGSLGERVVVASPIYKHHFDLRTGECLETPAYSVDAFAARVENGQVW
CCCCCHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VAV
EEC
>Mature Secondary Structure
MNNDRLPRSWTPVCQLDDIVPNTGVCALVNGEQVAVFHVTNGAGDDNGDATATVYAIENF
CCCCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEEECC
DPGSQAAVLSRGLIGSLGERVVVASPIYKHHFDLRTGECLETPAYSVDAFAARVENGQVW
CCCCCHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VAV
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]