| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is epsB [H]
Identifier: 91783573
GI number: 91783573
Start: 2436233
End: 2438455
Strand: Direct
Name: epsB [H]
Synonym: Bxe_A2242
Alternate gene names: 91783573
Gene position: 2436233-2438455 (Clockwise)
Preceding gene: 91783572
Following gene: 91783574
Centisome position: 49.76
GC content: 65.63
Gene sequence:
>2223_bases GTGAGCAACCAGATCTCTCCACACATGGCCGGTCCGATCAAGACCGAAGAAGAGGACGTCGTCCTCGGGCAACTGCTGCA GGTGATCCTCGACGACATCTGGTGGCTGATCGCCATCGCCGCCGTGATCGTCGCGATTGCGGGTGCGTACTGCTTCCTCG CCAAGCCGATCTATTCCGCCGATGCGCACGTGCGGGTCGAGCAGTCCGACAACACGTCACAGGCGCTCACGCAGACGCAA ACGGGCGCGGCGATCACCACCGGCTCGACCGCGCTGCCGACCGACGCCGAGATCGAAATTATCAAGAGCCGCGGCGTGGT CGGCCCGGTCGTGCAGCAGCTCAAACTGAACTTCAGCGTCACGCCGAAGACCTTCCCGCTGCTCGGCAGCATCGCCGCGC GCATGGCGACGCCGGGTCAGCCGGCGCGTCCGTGGCTGGGCTTGTCGTCGTACGCATGGGGCGGTGAAGAGGCCGACGTC GATTCGATCGACGTGATCCCCGCGCTGGAAGGTCAGAAGCTGACCATGAAGGTGCTGGACGACCAGCACTACGAACTGTA TGCGACCAACGGCGCGCTGCTGCTGCGCGGCGTCGTCGGCCAGCAGGAACAGGGCGGCGGCGTGACCATGACGGTCAACA AACTGGTGGCGCGCCCCGGCGAGGAATTCACGGTGATGCGCGCCAACGACCTCGACGCGATCACCGCGTTCCAGTCGGCC ATCACGGTGCAGGAGCAGGGCAAGCAGACCGGCGTGATCCAGATTTCGCTGGAAGACAAGAGCCCGGAACATGCCGCGCT GGTCGCCAACGCGCTCGCCCAGTCGTATGTGCGCCAGCACGTGCTGAACAAGCAGGCCGACGCGAGCAAGATGCTCGACT TCCTGAAGAGCGAAGAGCCGCGCCTGAAGGCCGACCTCGAACGCGCCGAAGCCGCGCTGACCGCGTATCAGCGTCAGTCC GGCTCGATCAACGCGAGCGACGAAGCCAAGGTGTACCTGGAAGGCAGCATGCAGTACGAACAGCAGATCGCCGGCTTGCG CCTGCAGATGGCGCAGCTCACCGAGCGTTACGGCGACGACCACCCGATGCTGGTGGCCGCGCGCGCGCAGATGGCCGAAT TGCAGGCGCAGCGCGCCAAATACGCCGACCGCTTCCGCGATCTGCCGGCCACCGAAGTGAAGGCCGTGCAGTTGCAGCGC GACGCGAAAGTGGCCGAAGACATCTACGTGCTGCTGCTCAACCGGGTGCAGGAGTTGTCGGTGCAGAAGGCCGGCACCGG CGGCAACGTGCATATCGTCGACGCCGCGCTGCGCCCGGGCGTGCCGGTCAAGCCGAAGAAGGCGCTGATCCTCTCGGCGG CGGTGATTCTCGGGCTGATCGCGGGCACCGGCTTCGTGTTCCTGCGCCGCAATATGTTCAAGGGCATCGACGACCCCGAT CACATCGAGCGTGCGTTCCACCTGCCGGTGTTCGGCCTCGTACCGCAAAGCGCCGAACAGGCCGTGCTCGAAAGCAGCTT CCTGCGCGGCGGCGAACGCCTGCGCTCGGTGCTGGCGAATGCGCGGCCGAAGGACGTCACGGTGGAAAGCCTGCGCAGTC TGCGCACCTCCATGCAGTTCACCATGATGGACGCGAAGAACCGCATCGTCATGCTGACGGGGCCGATGGCCGGCGTCGGC AAGAGCTTCCTGACGGTCAACCTCGCGGTGCTGCTCGCGAATTCGGGCAAGCGTGTGCTGATGATCGACGGCGACATGCG CCGCGGTGTGCTCGAACGCTATCTGGGCGGTGTGCCGGATAACGGTCTCTCTGAATTGCTGAGCGGCCAGATCTCGCTGG AAGAAGCGATTCGCAGCTCGAATGTGGAGGGCCTGAGCTTCATCTCGTGCGGCCGCCGTCCGCCGAATCCGTCGGAGCTG CTGATGTCGCCGCGCCTGCCGCAATACCTCGAAGGTCTCGCCAAGCGCTACGACGTGATCATGATCGATACGCCGCCGGT GCTGGCCGTGACCGATGCGTCGATCATCGGCGCGTATGCCGGATCGACCTTCTTCGTGATGCGCTCGGGCGTGCACAGCG AGGGCGAAATCGCCGACGCGCTCAAGCGTCTGCGCGCGGCCGGCGTGCACGTGCAGGGCGGCATTTTCAACGGCATGCCG GCGCGTTCGCGCGGCGGCTACGACCGGGGCTATGCGGCGGTTCAGGAATACCTGAGCACCTGA
Upstream 100 bases:
>100_bases ATCATCTGAACCGCTGTCGTCAGGCCCGCGCCGCGCCGCCCATCGGGGACGCGGCGCGGGACCGAAGCAAACGCGATGTA ACCGATACGGGAAGCGAATT
Downstream 100 bases:
>100_bases GCCGGATGCGTTTCGGGATGCAATCCGGTCTTCGCGCAACGACGATTAAAAAGGACATCACGATGAAAGTGACGGTACTG GTTCCGACTTTCCGACGCCC
Product: protein-tyrosine kinase
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: EPS I polysaccharide export protein epsB [H]
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MSNQISPHMAGPIKTEEEDVVLGQLLQVILDDIWWLIAIAAVIVAIAGAYCFLAKPIYSADAHVRVEQSDNTSQALTQTQ TGAAITTGSTALPTDAEIEIIKSRGVVGPVVQQLKLNFSVTPKTFPLLGSIAARMATPGQPARPWLGLSSYAWGGEEADV DSIDVIPALEGQKLTMKVLDDQHYELYATNGALLLRGVVGQQEQGGGVTMTVNKLVARPGEEFTVMRANDLDAITAFQSA ITVQEQGKQTGVIQISLEDKSPEHAALVANALAQSYVRQHVLNKQADASKMLDFLKSEEPRLKADLERAEAALTAYQRQS GSINASDEAKVYLEGSMQYEQQIAGLRLQMAQLTERYGDDHPMLVAARAQMAELQAQRAKYADRFRDLPATEVKAVQLQR DAKVAEDIYVLLLNRVQELSVQKAGTGGNVHIVDAALRPGVPVKPKKALILSAAVILGLIAGTGFVFLRRNMFKGIDDPD HIERAFHLPVFGLVPQSAEQAVLESSFLRGGERLRSVLANARPKDVTVESLRSLRTSMQFTMMDAKNRIVMLTGPMAGVG KSFLTVNLAVLLANSGKRVLMIDGDMRRGVLERYLGGVPDNGLSELLSGQISLEEAIRSSNVEGLSFISCGRRPPNPSEL LMSPRLPQYLEGLAKRYDVIMIDTPPVLAVTDASIIGAYAGSTFFVMRSGVHSEGEIADALKRLRAAGVHVQGGIFNGMP ARSRGGYDRGYAAVQEYLST
Sequences:
>Translated_740_residues MSNQISPHMAGPIKTEEEDVVLGQLLQVILDDIWWLIAIAAVIVAIAGAYCFLAKPIYSADAHVRVEQSDNTSQALTQTQ TGAAITTGSTALPTDAEIEIIKSRGVVGPVVQQLKLNFSVTPKTFPLLGSIAARMATPGQPARPWLGLSSYAWGGEEADV DSIDVIPALEGQKLTMKVLDDQHYELYATNGALLLRGVVGQQEQGGGVTMTVNKLVARPGEEFTVMRANDLDAITAFQSA ITVQEQGKQTGVIQISLEDKSPEHAALVANALAQSYVRQHVLNKQADASKMLDFLKSEEPRLKADLERAEAALTAYQRQS GSINASDEAKVYLEGSMQYEQQIAGLRLQMAQLTERYGDDHPMLVAARAQMAELQAQRAKYADRFRDLPATEVKAVQLQR DAKVAEDIYVLLLNRVQELSVQKAGTGGNVHIVDAALRPGVPVKPKKALILSAAVILGLIAGTGFVFLRRNMFKGIDDPD HIERAFHLPVFGLVPQSAEQAVLESSFLRGGERLRSVLANARPKDVTVESLRSLRTSMQFTMMDAKNRIVMLTGPMAGVG KSFLTVNLAVLLANSGKRVLMIDGDMRRGVLERYLGGVPDNGLSELLSGQISLEEAIRSSNVEGLSFISCGRRPPNPSEL LMSPRLPQYLEGLAKRYDVIMIDTPPVLAVTDASIIGAYAGSTFFVMRSGVHSEGEIADALKRLRAAGVHVQGGIFNGMP ARSRGGYDRGYAAVQEYLST >Mature_739_residues SNQISPHMAGPIKTEEEDVVLGQLLQVILDDIWWLIAIAAVIVAIAGAYCFLAKPIYSADAHVRVEQSDNTSQALTQTQT GAAITTGSTALPTDAEIEIIKSRGVVGPVVQQLKLNFSVTPKTFPLLGSIAARMATPGQPARPWLGLSSYAWGGEEADVD SIDVIPALEGQKLTMKVLDDQHYELYATNGALLLRGVVGQQEQGGGVTMTVNKLVARPGEEFTVMRANDLDAITAFQSAI TVQEQGKQTGVIQISLEDKSPEHAALVANALAQSYVRQHVLNKQADASKMLDFLKSEEPRLKADLERAEAALTAYQRQSG SINASDEAKVYLEGSMQYEQQIAGLRLQMAQLTERYGDDHPMLVAARAQMAELQAQRAKYADRFRDLPATEVKAVQLQRD AKVAEDIYVLLLNRVQELSVQKAGTGGNVHIVDAALRPGVPVKPKKALILSAAVILGLIAGTGFVFLRRNMFKGIDDPDH IERAFHLPVFGLVPQSAEQAVLESSFLRGGERLRSVLANARPKDVTVESLRSLRTSMQFTMMDAKNRIVMLTGPMAGVGK SFLTVNLAVLLANSGKRVLMIDGDMRRGVLERYLGGVPDNGLSELLSGQISLEEAIRSSNVEGLSFISCGRRPPNPSELL MSPRLPQYLEGLAKRYDVIMIDTPPVLAVTDASIIGAYAGSTFFVMRSGVHSEGEIADALKRLRAAGVHVQGGIFNGMPA RSRGGYDRGYAAVQEYLST
Specific function: Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the in
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=735, Percent_Identity=35.5102040816327, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI1787216, Length=730, Percent_Identity=33.013698630137, Blast_Score=413, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 80053; Mature: 79922
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQISPHMAGPIKTEEEDVVLGQLLQVILDDIWWLIAIAAVIVAIAGAYCFLAKPIYSA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC DAHVRVEQSDNTSQALTQTQTGAAITTGSTALPTDAEIEIIKSRGVVGPVVQQLKLNFSV CCEEEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEE TPKTFPLLGSIAARMATPGQPARPWLGLSSYAWGGEEADVDSIDVIPALEGQKLTMKVLD CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC DQHYELYATNGALLLRGVVGQQEQGGGVTMTVNKLVARPGEEFTVMRANDLDAITAFQSA CCCEEEEEECCEEEEEECCCCCCCCCCEEEEEHHHHCCCCCCEEEEECCCCHHHHHHHHH ITVQEQGKQTGVIQISLEDKSPEHAALVANALAQSYVRQHVLNKQADASKMLDFLKSEEP HHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC RLKADLERAEAALTAYQRQSGSINASDEAKVYLEGSMQYEQQIAGLRLQMAQLTERYGDD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC HPMLVAARAQMAELQAQRAKYADRFRDLPATEVKAVQLQRDAKVAEDIYVLLLNRVQELS CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQKAGTGGNVHIVDAALRPGVPVKPKKALILSAAVILGLIAGTGFVFLRRNMFKGIDDPD HHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH HIERAFHLPVFGLVPQSAEQAVLESSFLRGGERLRSVLANARPKDVTVESLRSLRTSMQF HHHHHHCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHE TMMDAKNRIVMLTGPMAGVGKSFLTVNLAVLLANSGKRVLMIDGDMRRGVLERYLGGVPD EEEECCCCEEEEECCCHHCCCHHHHHEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCC NGLSELLSGQISLEEAIRSSNVEGLSFISCGRRPPNPSELLMSPRLPQYLEGLAKRYDVI CCHHHHHCCCCHHHHHHHHCCCCCEEHEECCCCCCCHHHHCCCCCCHHHHHHHHHHCCEE MIDTPPVLAVTDASIIGAYAGSTFFVMRSGVHSEGEIADALKRLRAAGVHVQGGIFNGMP EECCCCEEEEECCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCC ARSRGGYDRGYAAVQEYLST CCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SNQISPHMAGPIKTEEEDVVLGQLLQVILDDIWWLIAIAAVIVAIAGAYCFLAKPIYSA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC DAHVRVEQSDNTSQALTQTQTGAAITTGSTALPTDAEIEIIKSRGVVGPVVQQLKLNFSV CCEEEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEE TPKTFPLLGSIAARMATPGQPARPWLGLSSYAWGGEEADVDSIDVIPALEGQKLTMKVLD CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC DQHYELYATNGALLLRGVVGQQEQGGGVTMTVNKLVARPGEEFTVMRANDLDAITAFQSA CCCEEEEEECCEEEEEECCCCCCCCCCEEEEEHHHHCCCCCCEEEEECCCCHHHHHHHHH ITVQEQGKQTGVIQISLEDKSPEHAALVANALAQSYVRQHVLNKQADASKMLDFLKSEEP HHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC RLKADLERAEAALTAYQRQSGSINASDEAKVYLEGSMQYEQQIAGLRLQMAQLTERYGDD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC HPMLVAARAQMAELQAQRAKYADRFRDLPATEVKAVQLQRDAKVAEDIYVLLLNRVQELS CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQKAGTGGNVHIVDAALRPGVPVKPKKALILSAAVILGLIAGTGFVFLRRNMFKGIDDPD HHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH HIERAFHLPVFGLVPQSAEQAVLESSFLRGGERLRSVLANARPKDVTVESLRSLRTSMQF HHHHHHCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHE TMMDAKNRIVMLTGPMAGVGKSFLTVNLAVLLANSGKRVLMIDGDMRRGVLERYLGGVPD EEEECCCCEEEEECCCHHCCCHHHHHEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCC NGLSELLSGQISLEEAIRSSNVEGLSFISCGRRPPNPSELLMSPRLPQYLEGLAKRYDVI CCHHHHHCCCCHHHHHHHHCCCCCEEHEECCCCCCCHHHHCCCCCCHHHHHHHHHHCCEE MIDTPPVLAVTDASIIGAYAGSTFFVMRSGVHSEGEIADALKRLRAAGVHVQGGIFNGMP EECCCCEEEEECCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCC ARSRGGYDRGYAAVQEYLST CCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]