| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783560
Identifier: 91783560
GI number: 91783560
Start: 2422048
End: 2423229
Strand: Direct
Name: 91783560
Synonym: Bxe_A2255
Alternate gene names: NA
Gene position: 2422048-2423229 (Clockwise)
Preceding gene: 91783559
Following gene: 91783561
Centisome position: 49.47
GC content: 68.95
Gene sequence:
>1182_bases ATGCTGACCACGCTGGCTGTCGCGGGTTACCGCTCGCTGCGCGAGCTGATCGTGCCGCTCGGCCGCCTGAACGTGATTAC GGGCGCCAATGGCAGCGGCAAGTCGAGCGTGTACCGTTCGCTGCGTTTGCTGGCGGAGACCGCGCGCGGCGGCGTGATTA CCTCATTGGCGCGTGAAGGCGGCTTGCCGTCCACGTTATGGGCCGGTCCCGAACGCTTTTCGCGCGCCGTGCTGGCCGGC GAGTTTCCGGTGGAGGGTACGCGGCGCAAAGAGCCCGTGAGCCTGCGGCTCGGCTTTGCCGGCGATCAGTTCGGCTACGC GATCGATCTGGGTCTGCCTGCGCCGGAGCGGCCGCCGCCTCCCATGCCGAGCAAGTTCCTGCTCGATCCGATCATCAAAC GCGAGTGCATCTGGAGCGGCCCCGTGCTGCGGCCGTCGGCGTTGCTGGTGGACCGGCACGGCCCGGCGCTGCGCACGCGC GACGAGCACGGCGACTGGCAAACCATTCCGCAACCCGTCGCCAGTTTCGACAGCATGATGACGGAGTTCTCCGATCCACG CACCGCGCCCGAGATGGTCACGGTGCGCGAGCAGATCCGCTCGTGGCGTTTCTACGACCATTTCCGCACCGACGCCGAAG CGGCCGCGCGTCTGCCGCAGATCGGCACGCACACGCCGGTGCTCGCGAACGACGGCGCGGACCTCGCCGCGGCCTTGCAA ACCATCCGCGAGATCGGCGACCCGGCCGCACTCGACGCCGCCATCGACGACGCCTTTCCGGGTTCGAGCCTCGACGTCAC GACACAGGACGGCCGCTTCGAAGTGGTGATGCAGCAGCATGGCCTGCTGCGGCCGCTGAAGGGCGCGGAACTGTCGGACG GCACCTTGCGCTATCTGCTGCTGGTCGCCGCCTTGCTCACGCCGCGGCCGCCGGAGCTTCTCGTGCTGAACGAGCCTGAA ACGAGCCTGCATCCGGACCTGCTGCCGGCGCTCGCCCGCCTGATCGCGCGGGCGGCCGCACATTCGCAGGTGCTGGTGGT GTCGCACGCGGCGCGGCTGATCGCGGCGCTGGAACGGGAGGAGGCGAGCCAGTCGATCGTGCTGGAGAAGCATTTCGGCG CCACCCGTATCACCGACGAGGACGAGCGCGATCTGCCGCCCTGGAAATGGGCCGCCCGATAA
Upstream 100 bases:
>100_bases CATACCTGGCGTGTTCGTCGCGCGGGCGATTCGCCGCGTGCGGGTGCGTAGCGGAATTACGGAACACGCGCGCGTGCGTG ACTGAATGGCGGGTGGCCGC
Downstream 100 bases:
>100_bases CCGCGGGACCGTTTCGGTGGCGAGTCGCATGTAAGCTGAATGTAACAGCGCCGAGAAAGTGCAAGATTGGGGGCTTTTTG TTGTCCCGTGGTGAATAATG
Product: ATPase, RecF-like
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; RecF/RecN/SMC N Terminal Domain; Recf Like Family Protein; DNA Replication And Repair Protein RecF; SMC Domain Protein; RecF/RecN/SMC Domain-Containing Protein; ATPase RecF-Like
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MLTTLAVAGYRSLRELIVPLGRLNVITGANGSGKSSVYRSLRLLAETARGGVITSLAREGGLPSTLWAGPERFSRAVLAG EFPVEGTRRKEPVSLRLGFAGDQFGYAIDLGLPAPERPPPPMPSKFLLDPIIKRECIWSGPVLRPSALLVDRHGPALRTR DEHGDWQTIPQPVASFDSMMTEFSDPRTAPEMVTVREQIRSWRFYDHFRTDAEAAARLPQIGTHTPVLANDGADLAAALQ TIREIGDPAALDAAIDDAFPGSSLDVTTQDGRFEVVMQQHGLLRPLKGAELSDGTLRYLLLVAALLTPRPPELLVLNEPE TSLHPDLLPALARLIARAAAHSQVLVVSHAARLIAALEREEASQSIVLEKHFGATRITDEDERDLPPWKWAAR
Sequences:
>Translated_393_residues MLTTLAVAGYRSLRELIVPLGRLNVITGANGSGKSSVYRSLRLLAETARGGVITSLAREGGLPSTLWAGPERFSRAVLAG EFPVEGTRRKEPVSLRLGFAGDQFGYAIDLGLPAPERPPPPMPSKFLLDPIIKRECIWSGPVLRPSALLVDRHGPALRTR DEHGDWQTIPQPVASFDSMMTEFSDPRTAPEMVTVREQIRSWRFYDHFRTDAEAAARLPQIGTHTPVLANDGADLAAALQ TIREIGDPAALDAAIDDAFPGSSLDVTTQDGRFEVVMQQHGLLRPLKGAELSDGTLRYLLLVAALLTPRPPELLVLNEPE TSLHPDLLPALARLIARAAAHSQVLVVSHAARLIAALEREEASQSIVLEKHFGATRITDEDERDLPPWKWAAR >Mature_393_residues MLTTLAVAGYRSLRELIVPLGRLNVITGANGSGKSSVYRSLRLLAETARGGVITSLAREGGLPSTLWAGPERFSRAVLAG EFPVEGTRRKEPVSLRLGFAGDQFGYAIDLGLPAPERPPPPMPSKFLLDPIIKRECIWSGPVLRPSALLVDRHGPALRTR DEHGDWQTIPQPVASFDSMMTEFSDPRTAPEMVTVREQIRSWRFYDHFRTDAEAAARLPQIGTHTPVLANDGADLAAALQ TIREIGDPAALDAAIDDAFPGSSLDVTTQDGRFEVVMQQHGLLRPLKGAELSDGTLRYLLLVAALLTPRPPELLVLNEPE TSLHPDLLPALARLIARAAAHSQVLVVSHAARLIAALEREEASQSIVLEKHFGATRITDEDERDLPPWKWAAR
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42879; Mature: 42879
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTLAVAGYRSLRELIVPLGRLNVITGANGSGKSSVYRSLRLLAETARGGVITSLAREG CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHC GLPSTLWAGPERFSRAVLAGEFPVEGTRRKEPVSLRLGFAGDQFGYAIDLGLPAPERPPP CCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCC PMPSKFLLDPIIKRECIWSGPVLRPSALLVDRHGPALRTRDEHGDWQTIPQPVASFDSMM CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH TEFSDPRTAPEMVTVREQIRSWRFYDHFRTDAEAAARLPQIGTHTPVLANDGADLAAALQ HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEECCCHHHHHHHH TIREIGDPAALDAAIDDAFPGSSLDVTTQDGRFEVVMQQHGLLRPLKGAELSDGTLRYLL HHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHCCCCCCCCCCCCCCHHHHHHH LVAALLTPRPPELLVLNEPETSLHPDLLPALARLIARAAAHSQVLVVSHAARLIAALERE HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH EASQSIVLEKHFGATRITDEDERDLPPWKWAAR HHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTTLAVAGYRSLRELIVPLGRLNVITGANGSGKSSVYRSLRLLAETARGGVITSLAREG CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHC GLPSTLWAGPERFSRAVLAGEFPVEGTRRKEPVSLRLGFAGDQFGYAIDLGLPAPERPPP CCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCC PMPSKFLLDPIIKRECIWSGPVLRPSALLVDRHGPALRTRDEHGDWQTIPQPVASFDSMM CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH TEFSDPRTAPEMVTVREQIRSWRFYDHFRTDAEAAARLPQIGTHTPVLANDGADLAAALQ HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEECCCHHHHHHHH TIREIGDPAALDAAIDDAFPGSSLDVTTQDGRFEVVMQQHGLLRPLKGAELSDGTLRYLL HHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHCCCCCCCCCCCCCCHHHHHHH LVAALLTPRPPELLVLNEPETSLHPDLLPALARLIARAAAHSQVLVVSHAARLIAALERE HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH EASQSIVLEKHFGATRITDEDERDLPPWKWAAR HHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA