| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is otsA [H]
Identifier: 91783559
GI number: 91783559
Start: 2420520
End: 2421932
Strand: Direct
Name: otsA [H]
Synonym: Bxe_A2256
Alternate gene names: 91783559
Gene position: 2420520-2421932 (Clockwise)
Preceding gene: 91783558
Following gene: 91783560
Centisome position: 49.44
GC content: 64.4
Gene sequence:
>1413_bases ATGGGGCGATTGATCGTCGTGTCGAATCGCGTCGCAACGCCGACGGAAACCAAGGGATCGGCCGGCGGCCTCGCGGTCGG CGTATTCGGCGCGCTGAAGGATGCCGGAGGCGTGTGGTTCGGCTGGAGCGGCGACGTGGTCAGCGAGACCGTCGCGAACG CCGGTCCGACGCTGGAGCAGGACGGCGCGGTGACCTTCGCGACCGTAGGGCTCACGCGCAAGGATTACGACCAGTACTAT CGCGGCTTTTCGAACGCGACATTGTGGCCGGTGTTCCACTACCGCAACGACCTCGCGCGCTACGAGCGCGAGGAATACAC GGGCTACCGGCGCGTCAACGCGTGGCTCGCGCACAAGCTGATCAAGCTGCTCGAACCCGACGACGTGATCTGGATTCACG ACTACCACCTGATCCCGTTCGCCGAGGCGCTGCGCAACGAGGGTGTCACGAACCGCATCGGCTTCTTCCTGCACATTCCG TTTCCCGCGCCGCAGATCCTGCTCAACATTCCGCCGCACGAGGAACTGGTGAAGTCGCTGTCGTGCTACGACCTGCTGGG CTTCCAGACCGCCACCGACGAACTCGCGTTCAAGGATTACGTCACGCGCCACGCGCGCGGCACGGTGAGTGCGGACGGTC TCGTCGAAGCGTTCGGCCGCAAGCTGCGCACCGGCGTCTACCGGATCGGCGTGTTCCCCGACGAAATCGCCGAGCAGGCG AAGCGCTACGAAAGCCGTCAGCACGTGCTCGACCTGAAGCAGAGCCTGGAAGGGCGCAAGCTGATCATGAGCGTCGACCG GCTGGACTATTCGAAGGGACTGGTCGAGCGGTTCCGGGCCTTCGAGCATCTGCTGGAGCGCTCGCCGGAATGGCGCGGCA ACGTCACGCTGGTGCAGATCGCGCCGCCCACCCGTTCGGACGTCGCCACCTATCAGAAGATTCGCCAGGATCTGGAGTAC GAAGCGGGGCGCATCAATGGCCGCTACTCGGGTCTCGACTACACGCCGATCCGCTATCTGAATCAGCAGTACGACCGCTG GAAGCTGATGTCGCTGTTTCGCGAATCGCAGATCGGTTTCGTCACGCCGCTGCACGACGGTATGAATCTGGTCGCGAAGG AATACGTCGCCGCGCAGAATCCCGACGATCCCGGCGTGCTGGTGCTGTCGATTTTCGCGGGTGCGGCGGCGGAGCTGAGC GGCGCGCTGCTCGTCAATCCACATGATGCGATCGGCATGTGCGAAGCCTTGCAGCGCGCGTTGCAGATGCCGCTCGACGC ACGTCAGCGGCGCCATGAAATCAACATGGCCGCGCTGCGCAAGAACGATCTCGGCGTGTGGCGCGACACGTTCCTGCACG ATCTGCGCAGCGTGCCGGTGCAGCAGCCAGGCAAGGGTGGCGGGCATAACTGA
Upstream 100 bases:
>100_bases TCAGGGTGGCTCGGGTTCCGTCGCGCGATTGCGCGGGACGCCGCCGGGACCTGATGCAACGCACCCGCGCGCGCCGCGCG AACCAAGGAGGACATGCAAC
Downstream 100 bases:
>100_bases TGGGGCGTCGTGACCCATACCTGGCGTGTTCGTCGCGCGGGCGATTCGCCGCGTGCGGGTGCGTAGCGGAATTACGGAAC ACGCGCGCGTGCGTGACTGA
Product: Alpha,alpha-trehalose-phosphate synthase(UDP- forming)
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MGRLIVVSNRVATPTETKGSAGGLAVGVFGALKDAGGVWFGWSGDVVSETVANAGPTLEQDGAVTFATVGLTRKDYDQYY RGFSNATLWPVFHYRNDLARYEREEYTGYRRVNAWLAHKLIKLLEPDDVIWIHDYHLIPFAEALRNEGVTNRIGFFLHIP FPAPQILLNIPPHEELVKSLSCYDLLGFQTATDELAFKDYVTRHARGTVSADGLVEAFGRKLRTGVYRIGVFPDEIAEQA KRYESRQHVLDLKQSLEGRKLIMSVDRLDYSKGLVERFRAFEHLLERSPEWRGNVTLVQIAPPTRSDVATYQKIRQDLEY EAGRINGRYSGLDYTPIRYLNQQYDRWKLMSLFRESQIGFVTPLHDGMNLVAKEYVAAQNPDDPGVLVLSIFAGAAAELS GALLVNPHDAIGMCEALQRALQMPLDARQRRHEINMAALRKNDLGVWRDTFLHDLRSVPVQQPGKGGGHN
Sequences:
>Translated_470_residues MGRLIVVSNRVATPTETKGSAGGLAVGVFGALKDAGGVWFGWSGDVVSETVANAGPTLEQDGAVTFATVGLTRKDYDQYY RGFSNATLWPVFHYRNDLARYEREEYTGYRRVNAWLAHKLIKLLEPDDVIWIHDYHLIPFAEALRNEGVTNRIGFFLHIP FPAPQILLNIPPHEELVKSLSCYDLLGFQTATDELAFKDYVTRHARGTVSADGLVEAFGRKLRTGVYRIGVFPDEIAEQA KRYESRQHVLDLKQSLEGRKLIMSVDRLDYSKGLVERFRAFEHLLERSPEWRGNVTLVQIAPPTRSDVATYQKIRQDLEY EAGRINGRYSGLDYTPIRYLNQQYDRWKLMSLFRESQIGFVTPLHDGMNLVAKEYVAAQNPDDPGVLVLSIFAGAAAELS GALLVNPHDAIGMCEALQRALQMPLDARQRRHEINMAALRKNDLGVWRDTFLHDLRSVPVQQPGKGGGHN >Mature_469_residues GRLIVVSNRVATPTETKGSAGGLAVGVFGALKDAGGVWFGWSGDVVSETVANAGPTLEQDGAVTFATVGLTRKDYDQYYR GFSNATLWPVFHYRNDLARYEREEYTGYRRVNAWLAHKLIKLLEPDDVIWIHDYHLIPFAEALRNEGVTNRIGFFLHIPF PAPQILLNIPPHEELVKSLSCYDLLGFQTATDELAFKDYVTRHARGTVSADGLVEAFGRKLRTGVYRIGVFPDEIAEQAK RYESRQHVLDLKQSLEGRKLIMSVDRLDYSKGLVERFRAFEHLLERSPEWRGNVTLVQIAPPTRSDVATYQKIRQDLEYE AGRINGRYSGLDYTPIRYLNQQYDRWKLMSLFRESQIGFVTPLHDGMNLVAKEYVAAQNPDDPGVLVLSIFAGAAAELSG ALLVNPHDAIGMCEALQRALQMPLDARQRRHEINMAALRKNDLGVWRDTFLHDLRSVPVQQPGKGGGHN
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=458, Percent_Identity=53.7117903930131, Blast_Score=467, Evalue=1e-133, Organism=Caenorhabditis elegans, GI115533558, Length=372, Percent_Identity=31.4516129032258, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI115533560, Length=372, Percent_Identity=31.4516129032258, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI71987012, Length=431, Percent_Identity=29.6983758700696, Blast_Score=152, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319602, Length=470, Percent_Identity=34.0425531914894, Blast_Score=274, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6323537, Length=383, Percent_Identity=28.1984334203655, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6320279, Length=415, Percent_Identity=27.4698795180723, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6323917, Length=443, Percent_Identity=25.5079006772009, Blast_Score=147, Evalue=3e-36, Organism=Drosophila melanogaster, GI19920676, Length=485, Percent_Identity=35.4639175257732, Blast_Score=265, Evalue=4e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 52956; Mature: 52825
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLIVVSNRVATPTETKGSAGGLAVGVFGALKDAGGVWFGWSGDVVSETVANAGPTLEQ CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCC DGAVTFATVGLTRKDYDQYYRGFSNATLWPVFHYRNDLARYEREEYTGYRRVNAWLAHKL CCCEEEEEECCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IKLLEPDDVIWIHDYHLIPFAEALRNEGVTNRIGFFLHIPFPAPQILLNIPPHEELVKSL HHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHH SCYDLLGFQTATDELAFKDYVTRHARGTVSADGLVEAFGRKLRTGVYRIGVFPDEIAEQA HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHH KRYESRQHVLDLKQSLEGRKLIMSVDRLDYSKGLVERFRAFEHLLERSPEWRGNVTLVQI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE APPTRSDVATYQKIRQDLEYEAGRINGRYSGLDYTPIRYLNQQYDRWKLMSLFRESQIGF CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE VTPLHDGMNLVAKEYVAAQNPDDPGVLVLSIFAGAAAELSGALLVNPHDAIGMCEALQRA EEECHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHHHCCCEEEECCCHHHHHHHHHHHH LQMPLDARQRRHEINMAALRKNDLGVWRDTFLHDLRSVPVQQPGKGGGHN HHCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GRLIVVSNRVATPTETKGSAGGLAVGVFGALKDAGGVWFGWSGDVVSETVANAGPTLEQ CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCC DGAVTFATVGLTRKDYDQYYRGFSNATLWPVFHYRNDLARYEREEYTGYRRVNAWLAHKL CCCEEEEEECCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IKLLEPDDVIWIHDYHLIPFAEALRNEGVTNRIGFFLHIPFPAPQILLNIPPHEELVKSL HHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHH SCYDLLGFQTATDELAFKDYVTRHARGTVSADGLVEAFGRKLRTGVYRIGVFPDEIAEQA HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHH KRYESRQHVLDLKQSLEGRKLIMSVDRLDYSKGLVERFRAFEHLLERSPEWRGNVTLVQI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE APPTRSDVATYQKIRQDLEYEAGRINGRYSGLDYTPIRYLNQQYDRWKLMSLFRESQIGF CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE VTPLHDGMNLVAKEYVAAQNPDDPGVLVLSIFAGAAAELSGALLVNPHDAIGMCEALQRA EEECHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHHHCCCEEEECCCHHHHHHHHHHHH LQMPLDARQRRHEINMAALRKNDLGVWRDTFLHDLRSVPVQQPGKGGGHN HHCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA