Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yjeP [C]

Identifier: 91783558

GI number: 91783558

Start: 2419039

End: 2420262

Strand: Direct

Name: yjeP [C]

Synonym: Bxe_A2257

Alternate gene names: 91783558

Gene position: 2419039-2420262 (Clockwise)

Preceding gene: 91783557

Following gene: 91783559

Centisome position: 49.41

GC content: 67.24

Gene sequence:

>1224_bases
ATGCCTACTCTCGACGACCTCAGCCGTATCGCCGAAGCGCCGTTGCATACGTGGCTCGGCGCGTTGATCGTCTCGGTGAT
CGCGGTGCTGCTGGCCGTGGGCATCCATCGGATCGGCGCGCGGATGGCGGCGCGGTTCGCGCGGCCTTACCCGCTCACCA
GCGTGGTGCTGCGCTACATCGACAAGCCGTCGCTCTTCGTGCTCGTGATCCTCGCGCTGGAAGCGGTATGGTGGGAAGCG
CCCGACACGCTGACCTTCATCACGCCGCTGCGCGACGCCGCCGCGATCGGGCTGATCGGTGCGATCACGTGGCTCTCGGT
GCGCTCGGCGGCGGCAATCGGCGAGGCGATCATTCAGGCCCATCCGCTCGATACCGCCGACAACCTGCAGGCGCGCCGCA
TCCATACGCAGGCGCGCGTGCTGGCGCGTTCGGTGATGTTCGTGATCGTGATCGTCGGCGTGGGCGGCGCGTTGATGACG
TTTCCCAATGTCCGGCAGATCGGCGCGAGCCTGCTGGCGTCGGCGGGCGTGGCCGGCCTCGTCGCCGGTATCGCCGCGCG
GCCGGTGCTCGGCAACCTGATCGCCGGCTTGCAGATCGCGCTGTCGCAGCCGATCCGTCTGGACGACGTTGTCGTGATTC
AGGGCGAGTGGGGGCGTATAGAGGAAATCACCGGCACGTATGTGTCGGTGCGTCTGTGGGATCAGCGGCGGCTGATCGTG
CCGCTACAGTGGTTCATCGAGAATCCGTTTTCCAACTGGACCCGCAGCAGTTCGCAGATCATCGGCACGGTGTTTCTGTA
CGTCGATTACCGGATGCCGCTCGCGCCGTTGCGCGAGGAACTCGCGCGCATCGTCGAGGACGCGCCGGAGTGGGACCGCC
GCGTGCAGGTGCTACAGGTCACCGACGGCACCGAGCGCTCGATGCAATTGCGCGCCCTCGTCAGTTCGCTCGATTCCGGC
CTGAACTGGGATTTGCGCTGCCGGGTGCGCGAGGGACTGCTCGACTTCATACAGAAGCACTATCCGCAGTATCTGCCGCG
GGCGCGCGCGGAAGTGTCGGCGGAACTCGAAACCGGCAAGGGCGCACCGCTCGACTGGGTGCCGCGCGGCACGCAGACGC
CGGCCGGCAGCACCGCCGCGCATACCGAGGCCGATCCAGTAGCAAGCCGCGCGGGCCGGGCACCGGCGGCCGATGTACCG
CAGCCTGTGAAGGAAAAAGTCTGA

Upstream 100 bases:

>100_bases
GAAGCGGCCCGATGCGTCGCGCAACACGCTGCCGCATTCGAGGTCTCACGATTCCGCGCCGGTTCTGTTCACCCCTCAAG
CCAGGAGGACGATCCCCTTG

Downstream 100 bases:

>100_bases
CGGCGGGTTTGATACCCGGTTTAACAGCGGTCCGGCGGTGGGTTCGACGGCGCAAGCGCCATACTGTGGCGCACAGGCGC
CGATGAATGCAACTGATCGG

Product: small-conductance mechanosensitive ion channel

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel MscS; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Domain-Containing Protein; MscS Family Transporter; Mechanosensitive Ion Channel Protein; MscS Mechanosensitive Ion Channel Protein; Transporter MscS Family; Small-Conductance Mechanosensitive Channel-Like Protein; Mechanosensitive Channel Protein

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPTLDDLSRIAEAPLHTWLGALIVSVIAVLLAVGIHRIGARMAARFARPYPLTSVVLRYIDKPSLFVLVILALEAVWWEA
PDTLTFITPLRDAAAIGLIGAITWLSVRSAAAIGEAIIQAHPLDTADNLQARRIHTQARVLARSVMFVIVIVGVGGALMT
FPNVRQIGASLLASAGVAGLVAGIAARPVLGNLIAGLQIALSQPIRLDDVVVIQGEWGRIEEITGTYVSVRLWDQRRLIV
PLQWFIENPFSNWTRSSSQIIGTVFLYVDYRMPLAPLREELARIVEDAPEWDRRVQVLQVTDGTERSMQLRALVSSLDSG
LNWDLRCRVREGLLDFIQKHYPQYLPRARAEVSAELETGKGAPLDWVPRGTQTPAGSTAAHTEADPVASRAGRAPAADVP
QPVKEKV

Sequences:

>Translated_407_residues
MPTLDDLSRIAEAPLHTWLGALIVSVIAVLLAVGIHRIGARMAARFARPYPLTSVVLRYIDKPSLFVLVILALEAVWWEA
PDTLTFITPLRDAAAIGLIGAITWLSVRSAAAIGEAIIQAHPLDTADNLQARRIHTQARVLARSVMFVIVIVGVGGALMT
FPNVRQIGASLLASAGVAGLVAGIAARPVLGNLIAGLQIALSQPIRLDDVVVIQGEWGRIEEITGTYVSVRLWDQRRLIV
PLQWFIENPFSNWTRSSSQIIGTVFLYVDYRMPLAPLREELARIVEDAPEWDRRVQVLQVTDGTERSMQLRALVSSLDSG
LNWDLRCRVREGLLDFIQKHYPQYLPRARAEVSAELETGKGAPLDWVPRGTQTPAGSTAAHTEADPVASRAGRAPAADVP
QPVKEKV
>Mature_406_residues
PTLDDLSRIAEAPLHTWLGALIVSVIAVLLAVGIHRIGARMAARFARPYPLTSVVLRYIDKPSLFVLVILALEAVWWEAP
DTLTFITPLRDAAAIGLIGAITWLSVRSAAAIGEAIIQAHPLDTADNLQARRIHTQARVLARSVMFVIVIVGVGGALMTF
PNVRQIGASLLASAGVAGLVAGIAARPVLGNLIAGLQIALSQPIRLDDVVVIQGEWGRIEEITGTYVSVRLWDQRRLIVP
LQWFIENPFSNWTRSSSQIIGTVFLYVDYRMPLAPLREELARIVEDAPEWDRRVQVLQVTDGTERSMQLRALVSSLDSGL
NWDLRCRVREGLLDFIQKHYPQYLPRARAEVSAELETGKGAPLDWVPRGTQTPAGSTAAHTEADPVASRAGRAPAADVPQ
PVKEKV

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44467; Mature: 44336

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLDDLSRIAEAPLHTWLGALIVSVIAVLLAVGIHRIGARMAARFARPYPLTSVVLRYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DKPSLFVLVILALEAVWWEAPDTLTFITPLRDAAAIGLIGAITWLSVRSAAAIGEAIIQA
CCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPLDTADNLQARRIHTQARVLARSVMFVIVIVGVGGALMTFPNVRQIGASLLASAGVAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCHHHH
VAGIAARPVLGNLIAGLQIALSQPIRLDDVVVIQGEWGRIEEITGTYVSVRLWDQRRLIV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCEEEEEEECCCCEEE
PLQWFIENPFSNWTRSSSQIIGTVFLYVDYRMPLAPLREELARIVEDAPEWDRRVQVLQV
EHHHHHCCCHHHHCCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCEEEEEE
TDGTERSMQLRALVSSLDSGLNWDLRCRVREGLLDFIQKHYPQYLPRARAEVSAELETGK
CCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GAPLDWVPRGTQTPAGSTAAHTEADPVASRAGRAPAADVPQPVKEKV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
PTLDDLSRIAEAPLHTWLGALIVSVIAVLLAVGIHRIGARMAARFARPYPLTSVVLRYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DKPSLFVLVILALEAVWWEAPDTLTFITPLRDAAAIGLIGAITWLSVRSAAAIGEAIIQA
CCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPLDTADNLQARRIHTQARVLARSVMFVIVIVGVGGALMTFPNVRQIGASLLASAGVAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCHHHH
VAGIAARPVLGNLIAGLQIALSQPIRLDDVVVIQGEWGRIEEITGTYVSVRLWDQRRLIV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCEEEEEEECCCCEEE
PLQWFIENPFSNWTRSSSQIIGTVFLYVDYRMPLAPLREELARIVEDAPEWDRRVQVLQV
EHHHHHCCCHHHHCCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCEEEEEE
TDGTERSMQLRALVSSLDSGLNWDLRCRVREGLLDFIQKHYPQYLPRARAEVSAELETGK
CCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GAPLDWVPRGTQTPAGSTAAHTEADPVASRAGRAPAADVPQPVKEKV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA