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The map label for this gene is bphB [H]

Identifier: 91783497

GI number: 91783497

Start: 2346593

End: 2348203

Strand: Direct

Name: bphB [H]

Synonym: Bxe_A2319

Alternate gene names: 91783497

Gene position: 2346593-2348203 (Clockwise)

Preceding gene: 91783495

Following gene: 91783498

Centisome position: 47.93

GC content: 66.98

Gene sequence:

>1611_bases
ATGAAACTATTCACGAAGGGTCTGCTGCTGATTGCCGTGCCGAGCGCGGTCGAGCTCGCGCTTCTCGGCGTCGTCTTCGA
CACCCAGGAGCAGACAGCGCAGGCCGCGCAGTGGGTTACCAACAGCAAGCAGATCCTCTATCAGTCGTCGGCTATCGTCG
ATCCGCTGCTGCGTCAGGCCGCGCGGGTCCGCACGGCTATGGTGATCGGCGACGCGTCGCTGATCGACCGCCACACGGTG
TGGGTCGATCTGGGCGACCGTCTGTCGAAGCTCGAGGTCCTCGTCGCCGATACGCCGCAGCAGGTCGAACGCGTGCACGA
GATGCAGCGGGCAGTCGAAGCTTATCGCGCGCAAACGGTCGCGATCTCGCAGGCGCTGCATGCGGGGCGCAGCCCGAATT
CGTTCGCCGCGCAGGAATCCGGCGCGTTGCCGCGGCAGGTCGCGTTGTTTCGCGACGAACTCGCGGCGTTCGGCGACGAA
GCGTCGCGGCTCGACACCGAGCGCTCGGCGGCGCTCGCGCGGCGCCGGGCGCGTCAGCAATACGCGCTGATCGGCGCGGT
GCTGGGCTCCATGCTGATCTGGGCGGCCACCGCAGTGGTGTTTGCGCGCAGCATAGGCCGCCGGCTGGAAGTGCTGGCCG
GGAACGCAGAGCGCCTGGGCAGTGGGCGCACGCTTGCCGCGCCTCTATCCGGCAGCGACGAAATTGCCGCGCTCGACACC
GTGCTGCATCAGACCGGCGAGCGTCTGCGCGAAGCCGAAGCCGAGCAGGCCATGCTGAAAACGCGGCTCGAAGCGCGCGC
GCGGGAACTGGCGAGCGTCAACGAGGAGTTGCGTCAGGAGACGCAGGACAATGAAATGTTCATCTACAGCGTGTCGCACG
ATCTGCGCTCGCCGTTGGTGAATCTGCAAGGTTTCTCGAAGGAATTGCAGGTCTCCTGCGACGAACTGGACAGCGTCGTC
GAGGCCGCGAAGTTGCCGGAAGCCGAACATCGGCGCATGGTGCATATTCTCGACGGCGACGTGCGCGAATCCCTGCAGTA
TTTGCGCGCCGCGGTCACGCAGGCCGCGGCGATCATCGAGGCGCTGTTGCGGATTTCGCGTGCCGGCCGGCTCGAATATC
AGTGGCAGCGTGTGAGCGTGGGGCGCGTGGTGGGGCGGGTGGTCGACGCACTGCAGGGCGTGATCGGGCAGCGCGCGGCC
GTGGTGACCGTACGCGAGTTGCCGCCCGCATGGGGCGATCCGGGCGCGATCGAGCAGATTTTCAGCAACCTGATCGGCAA
CGCGCTGAATTACCTCGACCCGGCGCGCAATGGGCGTATCGAAGTCGGCGCGCTGGACCCCGAACCGGTCGAGGAGACGG
AGCCGCGCGCGGTGCGCATGCGCACGTATTATGTACGCGACAACGGCCTCGGCATCCCGGCGGCCTACATGTCGAAGGTG
TTCCGGGCGTTTCAGCGCCTGCACGGCGACATCGCCAACGGCGACGGCATCGGCCTCGCGGTGGTGCGTCGCACAGTGGA
GCGGCATGGTGGCCGCGTGTGGGTCGAGTCGGCGGAAGGCGCGGGTTCAACTTTTTTCGTGGTGTTGCCGGAGCAACCCG
CGCGCCTCTGA

Upstream 100 bases:

>100_bases
TCGCCGATTCCGTCATCGCGAAGGCCGCCCAGCGCGGCACGGCGTGGCCGGGCTCGCGAACGGCGCGGCCTGAGTGACCC
TTGCGACGCTTCGGGCGAAC

Downstream 100 bases:

>100_bases
ACAGCAGCGGCAGGTGCGGCGGCAGCAGCGCGGACAATCACGAGCGGCGGGCATCAACGAATCGTTCAGCATGGAGAGCA
TATGACTCACGGGGAAACGG

Product: putative periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKLFTKGLLLIAVPSAVELALLGVVFDTQEQTAQAAQWVTNSKQILYQSSAIVDPLLRQAARVRTAMVIGDASLIDRHTV
WVDLGDRLSKLEVLVADTPQQVERVHEMQRAVEAYRAQTVAISQALHAGRSPNSFAAQESGALPRQVALFRDELAAFGDE
ASRLDTERSAALARRRARQQYALIGAVLGSMLIWAATAVVFARSIGRRLEVLAGNAERLGSGRTLAAPLSGSDEIAALDT
VLHQTGERLREAEAEQAMLKTRLEARARELASVNEELRQETQDNEMFIYSVSHDLRSPLVNLQGFSKELQVSCDELDSVV
EAAKLPEAEHRRMVHILDGDVRESLQYLRAAVTQAAAIIEALLRISRAGRLEYQWQRVSVGRVVGRVVDALQGVIGQRAA
VVTVRELPPAWGDPGAIEQIFSNLIGNALNYLDPARNGRIEVGALDPEPVEETEPRAVRMRTYYVRDNGLGIPAAYMSKV
FRAFQRLHGDIANGDGIGLAVVRRTVERHGGRVWVESAEGAGSTFFVVLPEQPARL

Sequences:

>Translated_536_residues
MKLFTKGLLLIAVPSAVELALLGVVFDTQEQTAQAAQWVTNSKQILYQSSAIVDPLLRQAARVRTAMVIGDASLIDRHTV
WVDLGDRLSKLEVLVADTPQQVERVHEMQRAVEAYRAQTVAISQALHAGRSPNSFAAQESGALPRQVALFRDELAAFGDE
ASRLDTERSAALARRRARQQYALIGAVLGSMLIWAATAVVFARSIGRRLEVLAGNAERLGSGRTLAAPLSGSDEIAALDT
VLHQTGERLREAEAEQAMLKTRLEARARELASVNEELRQETQDNEMFIYSVSHDLRSPLVNLQGFSKELQVSCDELDSVV
EAAKLPEAEHRRMVHILDGDVRESLQYLRAAVTQAAAIIEALLRISRAGRLEYQWQRVSVGRVVGRVVDALQGVIGQRAA
VVTVRELPPAWGDPGAIEQIFSNLIGNALNYLDPARNGRIEVGALDPEPVEETEPRAVRMRTYYVRDNGLGIPAAYMSKV
FRAFQRLHGDIANGDGIGLAVVRRTVERHGGRVWVESAEGAGSTFFVVLPEQPARL
>Mature_536_residues
MKLFTKGLLLIAVPSAVELALLGVVFDTQEQTAQAAQWVTNSKQILYQSSAIVDPLLRQAARVRTAMVIGDASLIDRHTV
WVDLGDRLSKLEVLVADTPQQVERVHEMQRAVEAYRAQTVAISQALHAGRSPNSFAAQESGALPRQVALFRDELAAFGDE
ASRLDTERSAALARRRARQQYALIGAVLGSMLIWAATAVVFARSIGRRLEVLAGNAERLGSGRTLAAPLSGSDEIAALDT
VLHQTGERLREAEAEQAMLKTRLEARARELASVNEELRQETQDNEMFIYSVSHDLRSPLVNLQGFSKELQVSCDELDSVV
EAAKLPEAEHRRMVHILDGDVRESLQYLRAAVTQAAAIIEALLRISRAGRLEYQWQRVSVGRVVGRVVDALQGVIGQRAA
VVTVRELPPAWGDPGAIEQIFSNLIGNALNYLDPARNGRIEVGALDPEPVEETEPRAVRMRTYYVRDNGLGIPAAYMSKV
FRAFQRLHGDIANGDGIGLAVVRRTVERHGGRVWVESAEGAGSTFFVVLPEQPARL

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789149, Length=273, Percent_Identity=24.9084249084249, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788549, Length=248, Percent_Identity=26.2096774193548, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 58775; Mature: 58775

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFTKGLLLIAVPSAVELALLGVVFDTQEQTAQAAQWVTNSKQILYQSSAIVDPLLRQA
CCCHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ARVRTAMVIGDASLIDRHTVWVDLGDRLSKLEVLVADTPQQVERVHEMQRAVEAYRAQTV
HHHHHHHEECCHHHHCCEEEEEECCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
AISQALHAGRSPNSFAAQESGALPRQVALFRDELAAFGDEASRLDTERSAALARRRARQQ
HHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YALIGAVLGSMLIWAATAVVFARSIGRRLEVLAGNAERLGSGRTLAAPLSGSDEIAALDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCHHHHHHH
VLHQTGERLREAEAEQAMLKTRLEARARELASVNEELRQETQDNEMFIYSVSHDLRSPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCHH
NLQGFSKELQVSCDELDSVVEAAKLPEAEHRRMVHILDGDVRESLQYLRAAVTQAAAIIE
HHCCCCHHHHCCHHHHHHHHHHHHCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
ALLRISRAGRLEYQWQRVSVGRVVGRVVDALQGVIGQRAAVVTVRELPPAWGDPGAIEQI
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCHHHHHH
FSNLIGNALNYLDPARNGRIEVGALDPEPVEETEPRAVRMRTYYVRDNGLGIPAAYMSKV
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHH
FRAFQRLHGDIANGDGIGLAVVRRTVERHGGRVWVESAEGAGSTFFVVLPEQPARL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKLFTKGLLLIAVPSAVELALLGVVFDTQEQTAQAAQWVTNSKQILYQSSAIVDPLLRQA
CCCHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ARVRTAMVIGDASLIDRHTVWVDLGDRLSKLEVLVADTPQQVERVHEMQRAVEAYRAQTV
HHHHHHHEECCHHHHCCEEEEEECCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
AISQALHAGRSPNSFAAQESGALPRQVALFRDELAAFGDEASRLDTERSAALARRRARQQ
HHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YALIGAVLGSMLIWAATAVVFARSIGRRLEVLAGNAERLGSGRTLAAPLSGSDEIAALDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCHHHHHHH
VLHQTGERLREAEAEQAMLKTRLEARARELASVNEELRQETQDNEMFIYSVSHDLRSPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCHH
NLQGFSKELQVSCDELDSVVEAAKLPEAEHRRMVHILDGDVRESLQYLRAAVTQAAAIIE
HHCCCCHHHHCCHHHHHHHHHHHHCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
ALLRISRAGRLEYQWQRVSVGRVVGRVVDALQGVIGQRAAVVTVRELPPAWGDPGAIEQI
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCHHHHHH
FSNLIGNALNYLDPARNGRIEVGALDPEPVEETEPRAVRMRTYYVRDNGLGIPAAYMSKV
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHH
FRAFQRLHGDIANGDGIGLAVVRRTVERHGGRVWVESAEGAGSTFFVVLPEQPARL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]