| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yhjG [H]
Identifier: 91783495
GI number: 91783495
Start: 2342871
End: 2345390
Strand: Direct
Name: yhjG [H]
Synonym: Bxe_A2321
Alternate gene names: 91783495
Gene position: 2342871-2345390 (Clockwise)
Preceding gene: 91783492
Following gene: 91783497
Centisome position: 47.85
GC content: 65.16
Gene sequence:
>2520_bases ATGGCAGTGTCGAGCACAACTGGAAGGCGCATCGGGAAAATCATCGCATGGCTGGTGGCGATCATCGTCATTCTGATCGT GGCGTTGACCATTTTCATCCTGACCTTCGACTGGAACCGTGCAAGGCCTTATATCAACGACAAGGTCACGCAGGCAATCG GCCGGCCGTTCGCGATCAACGGCGATCTGAAAGTGGGCTGGCGGCATCCCGTGGGCGAGACCGGCTGGCGCGGCTGGGTG CCCTGGCCGCGTTTCTCGGCGGCCAACATCACCGTGGGCAATCCGGACTGGACCAAACAGCCGCAATTCGCCACGCTCGA CGAGATCGACTTCCAGGTCAAGGTGCTGCCGCTGCTCACGCACGATATCGTGATTCCGGCCATCAACCTCGTGAATCCCT CGGTCGACCTGGAGCGCCTGCTCGACGGCCGCAACAACTGGACCTTCAAGCTGGCGTCGTCCGGCGGGCCTTCCGAATGG AAGCTCGATCTGCACGATATCGCGTTTGCCAAGGGCAACATCGCGCTGTCCGATCAGCAGAAGAAGGTCGATTTGCAGAT GGTGGTCGATACGCTCGGCCAGCCGATTCCGATTGGTGAAGCGATGAAGCAGCAGGAAGTGGCGTCGCGCAGCGCGTCGG CCGAAGCGATCGGCAAGGCGGGCGCGACCAGGCTGACCGCGCAGGCGAATGCGCAGGCGGCATCGGAGGCTGCGGCGGCA TCCGCGGCGGCGGCCTCCGGCGCATCGGCCGCGGATATCACCGCGTCGGGCACGACGGCGGCCACGGGCGCGTCAGGTGC GCTGGTCGCGGGCGGTTCGAAGGGCACCAGCGCGGCAGTCAGCGCAGGCGCGAGCGGTGCAGTGGTGGCGTCGGCTCCGG CATCGGCGCCCGCATCGGCTTCGGCGGCGAGCGGCGCGGAAGCTCAGGCGGCAGCGAAACGCGAGATTCCGCCATACGCC ATCGGCTGGACCGTCAAAGGGACGTACAACAAGACGCCAGTGTCGGGCAGCGGCAAGGTCGGCGGCGTGCTGGCGTTGCA GGACGCCAACCGGCCGTTCCCGGTGCAGGCCGATGTCAAGGCAGGCGATCTGCATGTCGGCCTGGTCGGTACGATTACCG ACCCCGCGCACCTCGCAGCGGTCGATCTGCGCCTCTGGCTGCAAGGCAACAGCATGGCGCGTCTCTATTCGCTCACCGGC GTAACCCTGCCCGACACGCCGCCCTATGCGACCGAAGGCCGCTTCGTCGGCCAGTTCAGGTCCAGCGGCAACGTCTTCAA GTATGAAAATTTTACAGGCCGGGTCGGCGGCAGCGATCTCAACGGCTCGTTGACTTATACCGCGCGTGAACCGCGTCCGC TGCTGCAGGGCGACCTGATCTCGCATGTGCTGCAGTTCTCGGATCTGGCGCCGGTGATCGGCGCGGATTCGAACGCCAGC AAGGCGAAGCGTGGCGACGCAACCGCGCAGCCGTCCAACAAGGTGCTGCCGGTGGAGGAATTCCGCACCGACCGCTGGAA GGCGATCGACGCCGACGTGAAATTCACCGGCCGGCGCATCATCAAGAACGTGAACCTGCCGATTACGGATCTGTACACGC ATATCGTGATGACCGACGGCGTGCTTTCGCTGGAGCCGTTGAAGTTCGGCGTGGCCGGCGGCACGCTGGCTTCGGACATT CATCTGGATGGCAGCGGAACGCCGCTCAAGGGGCGCTTCGCGACGTCGGCGCGGCATCTGAAGCTCAAGCAGCTGTTCCC GAACTTCAAGACCATGCAGAACGCGCTCGGTGAAATCAACGGCGACGCCGCGCTGACCGCGACGGGCAATTCGCCGGCGG CGCTGGCCGCCACCTCGAACGGCGAGGTGAAGGCGCTGGTGACCGACGGCACGGTAAGCCGCCTGCTGATGGAAGCGGCC GGCCTGAACGTGGCGAATGTCGTGTATGAAAAGCTGTTCGGCAATCGCGACGTGAAGATCAACTGCGCGGCCGCCGATTT CGTCGCGACCAACGGTGTGCTCGATTCGCGTGTCTTCGCGCTCGACACGGACGACGCAGTGATCGATATCGAGGGCAATG TGAATATGCGCGACGAGACGATGGACCTGGGCGTGCATCCGCATACCAAGGGTTTCCGGGTATTCTCGCTGCGCTCGCCG CTCTATGTGAAAGGCACGTTCAAGGATCCGCACGTGGGCGTGAACGCGGCCGCGCTGGCGTTGCGCGGTGGTGCGGCGGT CGGCCTCGGGCTGATCAATCCGTTTGCGGCACTGATTCCGTTGCTCGCGCCGAGCAACAACAAGCCGCTGCCATGCAACC AGTTGCTCGCGCAGGTCCGGCAGGCGCCGACGGCGCCGCCGCCGGGCTTGAAGCAGCAGCCCAAGTCCTCCATTTCGCTG GATGGCGTGCCGGTCAACAAGTCTTCGGGCGGCGCGTCCGCGCCCGCTGCGCCCGCTACGGCGGACAAAAAGCCAGCGGT GATGTCGCCGGCCAGCGCGGCTCAATACAAGGGGAGCTGA
Upstream 100 bases:
>100_bases AGCATGATAAAGCGGCGACGACATGACGCTTCCAGACCACCAGGCGGGCACGTAACGTGCTGATCGGTGCTCAACATAGA ACAATCCGCGGAGCCTCTCA
Downstream 100 bases:
>100_bases TGCCTTTCGATCTGCCTGCGGACTGGTTCAGCTGGAGTTTCGGCGGCGGCCTTTCATTCATTTTCCTGTGGCTGATCAGC GCACCGTCAGCGCGCGGCGA
Product: putative transmembrane protein, AsmA-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 839; Mature: 838
Protein sequence:
>839_residues MAVSSTTGRRIGKIIAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHPVGETGWRGWV PWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLTHDIVIPAINLVNPSVDLERLLDGRNNWTFKLASSGGPSEW KLDLHDIAFAKGNIALSDQQKKVDLQMVVDTLGQPIPIGEAMKQQEVASRSASAEAIGKAGATRLTAQANAQAASEAAAA SAAAASGASAADITASGTTAATGASGALVAGGSKGTSAAVSAGASGAVVASAPASAPASASAASGAEAQAAAKREIPPYA IGWTVKGTYNKTPVSGSGKVGGVLALQDANRPFPVQADVKAGDLHVGLVGTITDPAHLAAVDLRLWLQGNSMARLYSLTG VTLPDTPPYATEGRFVGQFRSSGNVFKYENFTGRVGGSDLNGSLTYTAREPRPLLQGDLISHVLQFSDLAPVIGADSNAS KAKRGDATAQPSNKVLPVEEFRTDRWKAIDADVKFTGRRIIKNVNLPITDLYTHIVMTDGVLSLEPLKFGVAGGTLASDI HLDGSGTPLKGRFATSARHLKLKQLFPNFKTMQNALGEINGDAALTATGNSPAALAATSNGEVKALVTDGTVSRLLMEAA GLNVANVVYEKLFGNRDVKINCAAADFVATNGVLDSRVFALDTDDAVIDIEGNVNMRDETMDLGVHPHTKGFRVFSLRSP LYVKGTFKDPHVGVNAAALALRGGAAVGLGLINPFAALIPLLAPSNNKPLPCNQLLAQVRQAPTAPPPGLKQQPKSSISL DGVPVNKSSGGASAPAAPATADKKPAVMSPASAAQYKGS
Sequences:
>Translated_839_residues MAVSSTTGRRIGKIIAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHPVGETGWRGWV PWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLTHDIVIPAINLVNPSVDLERLLDGRNNWTFKLASSGGPSEW KLDLHDIAFAKGNIALSDQQKKVDLQMVVDTLGQPIPIGEAMKQQEVASRSASAEAIGKAGATRLTAQANAQAASEAAAA SAAAASGASAADITASGTTAATGASGALVAGGSKGTSAAVSAGASGAVVASAPASAPASASAASGAEAQAAAKREIPPYA IGWTVKGTYNKTPVSGSGKVGGVLALQDANRPFPVQADVKAGDLHVGLVGTITDPAHLAAVDLRLWLQGNSMARLYSLTG VTLPDTPPYATEGRFVGQFRSSGNVFKYENFTGRVGGSDLNGSLTYTAREPRPLLQGDLISHVLQFSDLAPVIGADSNAS KAKRGDATAQPSNKVLPVEEFRTDRWKAIDADVKFTGRRIIKNVNLPITDLYTHIVMTDGVLSLEPLKFGVAGGTLASDI HLDGSGTPLKGRFATSARHLKLKQLFPNFKTMQNALGEINGDAALTATGNSPAALAATSNGEVKALVTDGTVSRLLMEAA GLNVANVVYEKLFGNRDVKINCAAADFVATNGVLDSRVFALDTDDAVIDIEGNVNMRDETMDLGVHPHTKGFRVFSLRSP LYVKGTFKDPHVGVNAAALALRGGAAVGLGLINPFAALIPLLAPSNNKPLPCNQLLAQVRQAPTAPPPGLKQQPKSSISL DGVPVNKSSGGASAPAAPATADKKPAVMSPASAAQYKGS >Mature_838_residues AVSSTTGRRIGKIIAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHPVGETGWRGWVP WPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLTHDIVIPAINLVNPSVDLERLLDGRNNWTFKLASSGGPSEWK LDLHDIAFAKGNIALSDQQKKVDLQMVVDTLGQPIPIGEAMKQQEVASRSASAEAIGKAGATRLTAQANAQAASEAAAAS AAAASGASAADITASGTTAATGASGALVAGGSKGTSAAVSAGASGAVVASAPASAPASASAASGAEAQAAAKREIPPYAI GWTVKGTYNKTPVSGSGKVGGVLALQDANRPFPVQADVKAGDLHVGLVGTITDPAHLAAVDLRLWLQGNSMARLYSLTGV TLPDTPPYATEGRFVGQFRSSGNVFKYENFTGRVGGSDLNGSLTYTAREPRPLLQGDLISHVLQFSDLAPVIGADSNASK AKRGDATAQPSNKVLPVEEFRTDRWKAIDADVKFTGRRIIKNVNLPITDLYTHIVMTDGVLSLEPLKFGVAGGTLASDIH LDGSGTPLKGRFATSARHLKLKQLFPNFKTMQNALGEINGDAALTATGNSPAALAATSNGEVKALVTDGTVSRLLMEAAG LNVANVVYEKLFGNRDVKINCAAADFVATNGVLDSRVFALDTDDAVIDIEGNVNMRDETMDLGVHPHTKGFRVFSLRSPL YVKGTFKDPHVGVNAAALALRGGAAVGLGLINPFAALIPLLAPSNNKPLPCNQLLAQVRQAPTAPPPGLKQQPKSSISLD GVPVNKSSGGASAPAAPATADKKPAVMSPASAAQYKGS
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=498, Percent_Identity=45.9839357429719, Blast_Score=456, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 87271; Mature: 87140
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSSTTGRRIGKIIAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAIN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCEEEC GDLKVGWRHPVGETGWRGWVPWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLT CCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHH HDIVIPAINLVNPSVDLERLLDGRNNWTFKLASSGGPSEWKLDLHDIAFAKGNIALSDQQ HHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCEEEEHHHEEEECCCEEECCCC KKVDLQMVVDTLGQPIPIGEAMKQQEVASRSASAEAIGKAGATRLTAQANAQAASEAAAA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHHH SAAAASGASAADITASGTTAATGASGALVAGGSKGTSAAVSAGASGAVVASAPASAPASA HHHHCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEECCCCCCCCC SAASGAEAQAAAKREIPPYAIGWTVKGTYNKTPVSGSGKVGGVLALQDANRPFPVQADVK CCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCC AGDLHVGLVGTITDPAHLAAVDLRLWLQGNSMARLYSLTGVTLPDTPPYATEGRFVGQFR CCCEEEEEEEECCCCHHEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC SSGNVFKYENFTGRVGGSDLNGSLTYTAREPRPLLQGDLISHVLQFSDLAPVIGADSNAS CCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCC KAKRGDATAQPSNKVLPVEEFRTDRWKAIDADVKFTGRRIIKNVNLPITDLYTHIVMTDG CCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCEECCHHHHHCCCCCHHHHHHHHHHCCC VLSLEPLKFGVAGGTLASDIHLDGSGTPLKGRFATSARHLKLKQLFPNFKTMQNALGEIN CEEECCEEEEECCCCEEEEEEECCCCCCCCCEECCCHHHEEHHHHCCCHHHHHHHHHCCC GDAALTATGNSPAALAATSNGEVKALVTDGTVSRLLMEAAGLNVANVVYEKLFGNRDVKI CCEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE NCAAADFVATNGVLDSRVFALDTDDAVIDIEGNVNMRDETMDLGVHPHTKGFRVFSLRSP EEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEECCCCCCCCCEEEEEECCC LYVKGTFKDPHVGVNAAALALRGGAAVGLGLINPFAALIPLLAPSNNKPLPCNQLLAQVR EEEEECCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QAPTAPPPGLKQQPKSSISLDGVPVNKSSGGASAPAAPATADKKPAVMSPASAAQYKGS HCCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure AVSSTTGRRIGKIIAWLVAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCEEEC GDLKVGWRHPVGETGWRGWVPWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLT CCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHH HDIVIPAINLVNPSVDLERLLDGRNNWTFKLASSGGPSEWKLDLHDIAFAKGNIALSDQQ HHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCEEEEHHHEEEECCCEEECCCC KKVDLQMVVDTLGQPIPIGEAMKQQEVASRSASAEAIGKAGATRLTAQANAQAASEAAAA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHHH SAAAASGASAADITASGTTAATGASGALVAGGSKGTSAAVSAGASGAVVASAPASAPASA HHHHCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEECCCCCCCCC SAASGAEAQAAAKREIPPYAIGWTVKGTYNKTPVSGSGKVGGVLALQDANRPFPVQADVK CCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCC AGDLHVGLVGTITDPAHLAAVDLRLWLQGNSMARLYSLTGVTLPDTPPYATEGRFVGQFR CCCEEEEEEEECCCCHHEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC SSGNVFKYENFTGRVGGSDLNGSLTYTAREPRPLLQGDLISHVLQFSDLAPVIGADSNAS CCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCC KAKRGDATAQPSNKVLPVEEFRTDRWKAIDADVKFTGRRIIKNVNLPITDLYTHIVMTDG CCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCEECCHHHHHCCCCCHHHHHHHHHHCCC VLSLEPLKFGVAGGTLASDIHLDGSGTPLKGRFATSARHLKLKQLFPNFKTMQNALGEIN CEEECCEEEEECCCCEEEEEEECCCCCCCCCEECCCHHHEEHHHHCCCHHHHHHHHHCCC GDAALTATGNSPAALAATSNGEVKALVTDGTVSRLLMEAAGLNVANVVYEKLFGNRDVKI CCEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE NCAAADFVATNGVLDSRVFALDTDDAVIDIEGNVNMRDETMDLGVHPHTKGFRVFSLRSP EEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEECCCCCCCCCEEEEEECCC LYVKGTFKDPHVGVNAAALALRGGAAVGLGLINPFAALIPLLAPSNNKPLPCNQLLAQVR EEEEECCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QAPTAPPPGLKQQPKSSISLDGVPVNKSSGGASAPAAPATADKKPAVMSPASAAQYKGS HCCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]