| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is zntR [C]
Identifier: 91783445
GI number: 91783445
Start: 2286556
End: 2287062
Strand: Direct
Name: zntR [C]
Synonym: Bxe_A2371
Alternate gene names: 91783445
Gene position: 2286556-2287062 (Clockwise)
Preceding gene: 91783442
Following gene: 91783446
Centisome position: 46.7
GC content: 65.09
Gene sequence:
>507_bases ATGTCGAATATCTCGAAAGCACTCACCATCGGCCAAGTTGCCGAAACGATCGGCGTCTCGACGCATACGCTGCGCTATTA CGAACAGGCGGGCTTGATCCGCGCCGTCGGGCGCACGGCGGCGGGGCATCGTCTGTATTCGCCGGCCGATCTCGACTGGC TGCGGTTCGTGATGCGGCTCAAGGCGACCGGCATGCCGATCGCCGGTATGCAGGCGTTCGCGGCGCTGCGCGCGCAAGGC CAGCCGAGCGTGGGCGCGCGCCGCGACGTGCTGGTGGCGCATCGGGACGCGGTTTTGGCGCGCATCGCCGGGTTGCAGCT CAATCTCGGCGCGATCGTTGACAAGATCGCGCACTACGAAGCGGCCGAACGCGCACCCGCCGCGGATCATTCGACACGAC AGATCGACGAACCGACCGGCGAAACCCCGACGCATTCACACCAGGAAAAGGACTCATCATGGATCACGCACACAACGACC GCTACGCCCGAGGCTGGGACAAACTGA
Upstream 100 bases:
>100_bases GCGCGTGCCAAAAAGAACGAGCGAGAACGGCGGCGAGAACAAATGACAGCACGACGCGCTTGACTTAGAGTGCACTCGAA GTCCTAACCTGAGTTCCGTC
Downstream 100 bases:
>100_bases AGGAGATCGACGGCTCGGCCGGCGAGCAGGTGATCGCCGCGCTCGCGCCGATCGCGCCGGATTTTGGCCAGTTGCTGATC GAATTCGGTTTCGGCGATAT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSNISKALTIGQVAETIGVSTHTLRYYEQAGLIRAVGRTAAGHRLYSPADLDWLRFVMRLKATGMPIAGMQAFAALRAQG QPSVGARRDVLVAHRDAVLARIAGLQLNLGAIVDKIAHYEAAERAPAADHSTRQIDEPTGETPTHSHQEKDSSWITHTTT ATPEAGTN
Sequences:
>Translated_168_residues MSNISKALTIGQVAETIGVSTHTLRYYEQAGLIRAVGRTAAGHRLYSPADLDWLRFVMRLKATGMPIAGMQAFAALRAQG QPSVGARRDVLVAHRDAVLARIAGLQLNLGAIVDKIAHYEAAERAPAADHSTRQIDEPTGETPTHSHQEKDSSWITHTTT ATPEAGTN >Mature_167_residues SNISKALTIGQVAETIGVSTHTLRYYEQAGLIRAVGRTAAGHRLYSPADLDWLRFVMRLKATGMPIAGMQAFAALRAQGQ PSVGARRDVLVAHRDAVLARIAGLQLNLGAIVDKIAHYEAAERAPAADHSTRQIDEPTGETPTHSHQEKDSSWITHTTTA TPEAGTN
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH merR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 - InterPro: IPR015358 [H]
Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]
EC number: NA
Molecular weight: Translated: 18061; Mature: 17929
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNISKALTIGQVAETIGVSTHTLRYYEQAGLIRAVGRTAAGHRLYSPADLDWLRFVMRL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KATGMPIAGMQAFAALRAQGQPSVGARRDVLVAHRDAVLARIAGLQLNLGAIVDKIAHYE HHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AAERAPAADHSTRQIDEPTGETPTHSHQEKDSSWITHTTTATPEAGTN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure SNISKALTIGQVAETIGVSTHTLRYYEQAGLIRAVGRTAAGHRLYSPADLDWLRFVMRL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KATGMPIAGMQAFAALRAQGQPSVGARRDVLVAHRDAVLARIAGLQLNLGAIVDKIAHYE HHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AAERAPAADHSTRQIDEPTGETPTHSHQEKDSSWITHTTTATPEAGTN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]