Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is nsrR [H]

Identifier: 91783441

GI number: 91783441

Start: 2281617

End: 2282117

Strand: Direct

Name: nsrR [H]

Synonym: Bxe_A2375

Alternate gene names: 91783441

Gene position: 2281617-2282117 (Clockwise)

Preceding gene: 91783439

Following gene: 91783442

Centisome position: 46.6

GC content: 65.27

Gene sequence:

>501_bases
ATGAGACTGACCGACTATACGGATTACTCACTACGCGTTTTGCTATACCTCGCCGTGCGCGGCGAAGGCTTATCGACGAT
CCAGGACATTTCGGACGCATACGGCATTTCCCGGAATCACTTGATGAAAGTCGTGCAGCAACTCGGCGAACTGGGCTGGG
TCGAGACGGTGCGTGGGCGCAACGGCGGCTTGCGGCTCGCCGATCGAACCAGCGCGCTGACGGTCGGCGAAATCGTGCGC
GCGACGGAAAGCGACTTTGCACTCGTCGGCTGTTTTCCGGACCAGCAGGGCGAGCGTCGGGCTTGCGTCATTACGTCGCA
GTGCCGTCTGCGTGGCGCGCTCGAGGCGGCACGCCACGCCTTTCTCTCCGAGCTCGACCGGCATACCATTGGCGAGGTGG
CGCAGCCGCACGGGCCGCTGTCCGCGCTGCTCGGCCTGAGCAGCGTGATTCCGATCGTGCCGGTTGCGCCGGCCGGCGGC
GGCTCCGCGCCGCTTACCTGA

Upstream 100 bases:

>100_bases
AGCGCCTGCATCTTAGGGCGAAGCGACGGTCCACGGCAACCCTTGCATCGACGCGGTTATCTCCGGATCGCGGCTTGCGT
TCATCGTGATACCTGCACCC

Downstream 100 bases:

>100_bases
ACGTGGTGCGGCAGTTCTCTTGCGTCAAATGTCAAATATTCGTCGCCTGATGCAAAAAAGCGCTTGAAACCTGGATAAAA
CACCTCATTTTGGTGGTAAT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGRNGGLRLADRTSALTVGEIVR
ATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHAFLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGG
GSAPLT

Sequences:

>Translated_166_residues
MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGRNGGLRLADRTSALTVGEIVR
ATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHAFLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGG
GSAPLT
>Mature_166_residues
MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGRNGGLRLADRTSALTVGEIVR
ATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHAFLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGG
GSAPLT

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=145, Percent_Identity=42.7586206896552, Blast_Score=126, Evalue=6e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17781; Mature: 17781

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGR
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC
NGGLRLADRTSALTVGEIVRATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHA
CCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH
FLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGGGSAPLT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGR
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC
NGGLRLADRTSALTVGEIVRATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHA
CCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH
FLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGGGSAPLT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA