| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is nsrR [H]
Identifier: 91783441
GI number: 91783441
Start: 2281617
End: 2282117
Strand: Direct
Name: nsrR [H]
Synonym: Bxe_A2375
Alternate gene names: 91783441
Gene position: 2281617-2282117 (Clockwise)
Preceding gene: 91783439
Following gene: 91783442
Centisome position: 46.6
GC content: 65.27
Gene sequence:
>501_bases ATGAGACTGACCGACTATACGGATTACTCACTACGCGTTTTGCTATACCTCGCCGTGCGCGGCGAAGGCTTATCGACGAT CCAGGACATTTCGGACGCATACGGCATTTCCCGGAATCACTTGATGAAAGTCGTGCAGCAACTCGGCGAACTGGGCTGGG TCGAGACGGTGCGTGGGCGCAACGGCGGCTTGCGGCTCGCCGATCGAACCAGCGCGCTGACGGTCGGCGAAATCGTGCGC GCGACGGAAAGCGACTTTGCACTCGTCGGCTGTTTTCCGGACCAGCAGGGCGAGCGTCGGGCTTGCGTCATTACGTCGCA GTGCCGTCTGCGTGGCGCGCTCGAGGCGGCACGCCACGCCTTTCTCTCCGAGCTCGACCGGCATACCATTGGCGAGGTGG CGCAGCCGCACGGGCCGCTGTCCGCGCTGCTCGGCCTGAGCAGCGTGATTCCGATCGTGCCGGTTGCGCCGGCCGGCGGC GGCTCCGCGCCGCTTACCTGA
Upstream 100 bases:
>100_bases AGCGCCTGCATCTTAGGGCGAAGCGACGGTCCACGGCAACCCTTGCATCGACGCGGTTATCTCCGGATCGCGGCTTGCGT TCATCGTGATACCTGCACCC
Downstream 100 bases:
>100_bases ACGTGGTGCGGCAGTTCTCTTGCGTCAAATGTCAAATATTCGTCGCCTGATGCAAAAAAGCGCTTGAAACCTGGATAAAA CACCTCATTTTGGTGGTAAT
Product: BadM/Rrf2 family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGRNGGLRLADRTSALTVGEIVR ATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHAFLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGG GSAPLT
Sequences:
>Translated_166_residues MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGRNGGLRLADRTSALTVGEIVR ATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHAFLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGG GSAPLT >Mature_166_residues MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGRNGGLRLADRTSALTVGEIVR ATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHAFLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGG GSAPLT
Specific function: Nitric oxide-responsive transcriptional regulator [H]
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790621, Length=145, Percent_Identity=42.7586206896552, Blast_Score=126, Evalue=6e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000944 - InterPro: IPR011991 [H]
Pfam domain/function: PF02082 Rrf2 [H]
EC number: NA
Molecular weight: Translated: 17781; Mature: 17781
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGR CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC NGGLRLADRTSALTVGEIVRATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHA CCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH FLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGGGSAPLT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC >Mature Secondary Structure MRLTDYTDYSLRVLLYLAVRGEGLSTIQDISDAYGISRNHLMKVVQQLGELGWVETVRGR CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC NGGLRLADRTSALTVGEIVRATESDFALVGCFPDQQGERRACVITSQCRLRGALEAARHA CCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH FLSELDRHTIGEVAQPHGPLSALLGLSSVIPIVPVAPAGGGSAPLT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA