| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783337
Identifier: 91783337
GI number: 91783337
Start: 2183117
End: 2184709
Strand: Direct
Name: 91783337
Synonym: Bxe_A2482
Alternate gene names: NA
Gene position: 2183117-2184709 (Clockwise)
Preceding gene: 91783333
Following gene: 91783338
Centisome position: 44.59
GC content: 63.4
Gene sequence:
>1593_bases ATGAAGCACGATCCACAGCCGGCCACCGCATCAGAATGGCGCGCCGAAGGCGACGCCTGTGCGGCGCGCGGCGAACTCGA CGCCGCGCTTCAACGTTTCGAACACGCGCGCGTGCTTGCCCCTGCCGATGCGCTCGTGCATCAGCGCATCGCGGCGACGC TCGCCGCCCTGAACCATTTTCCCGAGGCCGTCGAACGCTATCGGGAAGCGATCGCGCTCGATCCGCGCGACACGGATTCG CATCACGGCCTCGGCTGGACGCTCGAGCAGATGCATCGGCTCGAACAGGCGGTGGACGCTTATCGCGAGGCGGCTCGCCT GAATCCGCACGCCGACGGCTCGCACAACAACATGGGCAACTGCCTGCAGGCGCTCGGCCGTTTCGACGAAGCGCACGCAG CGTATCGCCGCGCAATCGAAGCCGCACCGCAGGTGCCGCTGTACTACCGCAACTTCGTGCAGACCAAGCGCCTCACTACT GAAGATCCGGTATTCGTCGCGATGGAAAGCCTTGTCGGCAACGCGGCGTCGCTCACGCCGGCCAACCAGGCGGAGATTCA CTTCGCGTACGGCCAGGCACTGTCCGATGTGGGCCGCAACGACGCATCGTTCGATCACTTCCTGAAGGGCAATGCATTGC ATCGCGTTAGCGTGCGCTACAACGAAGCGGACACGCTCGGCCTGTTCGCGCATCTGCCTGAGCTGACGGCTTCGGAAGTG CTGGAGGCGAAGCGCGGTCTGGGCGATCCGTCAGCGGCGCCGATCTTTATCGTCGGCATGCCGCGCTCGGGTTCGACCTT GATCGAACAGATTCTCGCGAGCCATCCCCAGGTATTCGGCGCGGGTGAGCGCACGGAATTCGGCGAGGCGCTGGTGCACT GCATCCGCCGCGATCCGGCTGATCCGTTGCGGATCGATATCGAAGCACTTGGGGACGTCGAGTCCGCGCCGTTGCGCGAA CTCGGCGCGGACTATCTGCGTCGCATGCGCGGCGCGCTGCCTGAAATCCACAGCCTCGCGCAGACCGGAGAAACCGGCCC GGCTCCACGCTATACGCACTTCACCGACAAATATCCGTTCAACTTCATCAACCTCGGTCTGATCCATCTGGCGCTGCCGA ATGCGCGCTTCATTCACAGCAGCCGCGCGCCTTTGCCAACCTGCCTGTCGATCTTCTCGCGCATTTTTCACGACGTGCCG TTCAGCTATGATCTCGGCGAACTGGGCCGTTACTACCGCGCCTATAACGCCCTGATGAACCACTGGCAACGTGTGCTCCC CGAAGGTGTAATGATCGAAGTCAAATACGAAGAACTGGTCGACGATTTCGAAGCCAATGTGCGCCGCTTGCTCGCGCATT GCGGGCTCGACTGGGACGAGCGTTGCCTGTCGTTTCATCAGACCACGCGGCAAGTGAATACGGCCAGTTCCGCGCAGGTG CGCCGTCCGCTGTACAAGACTTCAGTGCAGCGCTGGCAGCCGCAGCAGGCGTTGCTTCAACCGCTGTTCGACGGCTTGGG CCCGGAGCTCACACCGGCTCATGGCGCTCCGCCTGACGAAGTCGTGGCCACTGGCATGGAGCGTCGCTCATGA
Upstream 100 bases:
>100_bases CTCGAATCCAGGCCATGCCCATTTGCCGGCCGGATGAAAACACTGCACCCGCTCACTGCCAGGACCGCTCCATGCGAAGC CTGCAAATATCCCGCCGTCA
Downstream 100 bases:
>100_bases GCGCGGCGCGCGGTGCCGTGATATGGATGACGGGGCTCTCCGGCGCCGGCAAGTCGACGTTGGCCAACGCCTTGCATCTA CGGTTGAAGGAAGCAGGGCA
Product: sulfotransferase TPR domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MKHDPQPATASEWRAEGDACAARGELDAALQRFEHARVLAPADALVHQRIAATLAALNHFPEAVERYREAIALDPRDTDS HHGLGWTLEQMHRLEQAVDAYREAARLNPHADGSHNNMGNCLQALGRFDEAHAAYRRAIEAAPQVPLYYRNFVQTKRLTT EDPVFVAMESLVGNAASLTPANQAEIHFAYGQALSDVGRNDASFDHFLKGNALHRVSVRYNEADTLGLFAHLPELTASEV LEAKRGLGDPSAAPIFIVGMPRSGSTLIEQILASHPQVFGAGERTEFGEALVHCIRRDPADPLRIDIEALGDVESAPLRE LGADYLRRMRGALPEIHSLAQTGETGPAPRYTHFTDKYPFNFINLGLIHLALPNARFIHSSRAPLPTCLSIFSRIFHDVP FSYDLGELGRYYRAYNALMNHWQRVLPEGVMIEVKYEELVDDFEANVRRLLAHCGLDWDERCLSFHQTTRQVNTASSAQV RRPLYKTSVQRWQPQQALLQPLFDGLGPELTPAHGAPPDEVVATGMERRS
Sequences:
>Translated_530_residues MKHDPQPATASEWRAEGDACAARGELDAALQRFEHARVLAPADALVHQRIAATLAALNHFPEAVERYREAIALDPRDTDS HHGLGWTLEQMHRLEQAVDAYREAARLNPHADGSHNNMGNCLQALGRFDEAHAAYRRAIEAAPQVPLYYRNFVQTKRLTT EDPVFVAMESLVGNAASLTPANQAEIHFAYGQALSDVGRNDASFDHFLKGNALHRVSVRYNEADTLGLFAHLPELTASEV LEAKRGLGDPSAAPIFIVGMPRSGSTLIEQILASHPQVFGAGERTEFGEALVHCIRRDPADPLRIDIEALGDVESAPLRE LGADYLRRMRGALPEIHSLAQTGETGPAPRYTHFTDKYPFNFINLGLIHLALPNARFIHSSRAPLPTCLSIFSRIFHDVP FSYDLGELGRYYRAYNALMNHWQRVLPEGVMIEVKYEELVDDFEANVRRLLAHCGLDWDERCLSFHQTTRQVNTASSAQV RRPLYKTSVQRWQPQQALLQPLFDGLGPELTPAHGAPPDEVVATGMERRS >Mature_530_residues MKHDPQPATASEWRAEGDACAARGELDAALQRFEHARVLAPADALVHQRIAATLAALNHFPEAVERYREAIALDPRDTDS HHGLGWTLEQMHRLEQAVDAYREAARLNPHADGSHNNMGNCLQALGRFDEAHAAYRRAIEAAPQVPLYYRNFVQTKRLTT EDPVFVAMESLVGNAASLTPANQAEIHFAYGQALSDVGRNDASFDHFLKGNALHRVSVRYNEADTLGLFAHLPELTASEV LEAKRGLGDPSAAPIFIVGMPRSGSTLIEQILASHPQVFGAGERTEFGEALVHCIRRDPADPLRIDIEALGDVESAPLRE LGADYLRRMRGALPEIHSLAQTGETGPAPRYTHFTDKYPFNFINLGLIHLALPNARFIHSSRAPLPTCLSIFSRIFHDVP FSYDLGELGRYYRAYNALMNHWQRVLPEGVMIEVKYEELVDDFEANVRRLLAHCGLDWDERCLSFHQTTRQVNTASSAQV RRPLYKTSVQRWQPQQALLQPLFDGLGPELTPAHGAPPDEVVATGMERRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=139, Percent_Identity=27.3381294964029, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI32307150, Length=139, Percent_Identity=27.3381294964029, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 59038; Mature: 59038
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHDPQPATASEWRAEGDACAARGELDAALQRFEHARVLAPADALVHQRIAATLAALNHF CCCCCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PEAVERYREAIALDPRDTDSHHGLGWTLEQMHRLEQAVDAYREAARLNPHADGSHNNMGN HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH CLQALGRFDEAHAAYRRAIEAAPQVPLYYRNFVQTKRLTTEDPVFVAMESLVGNAASLTP HHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC ANQAEIHFAYGQALSDVGRNDASFDHFLKGNALHRVSVRYNEADTLGLFAHLPELTASEV CCCCEEEHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHH LEAKRGLGDPSAAPIFIVGMPRSGSTLIEQILASHPQVFGAGERTEFGEALVHCIRRDPA HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCC DPLRIDIEALGDVESAPLRELGADYLRRMRGALPEIHSLAQTGETGPAPRYTHFTDKYPF CCEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC NFINLGLIHLALPNARFIHSSRAPLPTCLSIFSRIFHDVPFSYDLGELGRYYRAYNALMN HHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HWQRVLPEGVMIEVKYEELVDDFEANVRRLLAHCGLDWDERCLSFHQTTRQVNTASSAQV HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH RRPLYKTSVQRWQPQQALLQPLFDGLGPELTPAHGAPPDEVVATGMERRS HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCC >Mature Secondary Structure MKHDPQPATASEWRAEGDACAARGELDAALQRFEHARVLAPADALVHQRIAATLAALNHF CCCCCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PEAVERYREAIALDPRDTDSHHGLGWTLEQMHRLEQAVDAYREAARLNPHADGSHNNMGN HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH CLQALGRFDEAHAAYRRAIEAAPQVPLYYRNFVQTKRLTTEDPVFVAMESLVGNAASLTP HHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC ANQAEIHFAYGQALSDVGRNDASFDHFLKGNALHRVSVRYNEADTLGLFAHLPELTASEV CCCCEEEHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHH LEAKRGLGDPSAAPIFIVGMPRSGSTLIEQILASHPQVFGAGERTEFGEALVHCIRRDPA HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCC DPLRIDIEALGDVESAPLRELGADYLRRMRGALPEIHSLAQTGETGPAPRYTHFTDKYPF CCEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC NFINLGLIHLALPNARFIHSSRAPLPTCLSIFSRIFHDVPFSYDLGELGRYYRAYNALMN HHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HWQRVLPEGVMIEVKYEELVDDFEANVRRLLAHCGLDWDERCLSFHQTTRQVNTASSAQV HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH RRPLYKTSVQRWQPQQALLQPLFDGLGPELTPAHGAPPDEVVATGMERRS HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]