| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is echA8 [H]
Identifier: 91783324
GI number: 91783324
Start: 2172104
End: 2173234
Strand: Direct
Name: echA8 [H]
Synonym: Bxe_A2495
Alternate gene names: 91783324
Gene position: 2172104-2173234 (Clockwise)
Preceding gene: 91783323
Following gene: 91783326
Centisome position: 44.37
GC content: 65.43
Gene sequence:
>1131_bases ATGTCCATTTCCGCCTCGCCCGCCGTCAGCGACGAAGTCGCGACTTACGTAGCCAACCGCATCGGTTTCATCGAACTGGA ACGGCCGAAAGCGCTCAACGCGCTGTCCACTGGCATGATTCGCGCCATCCACGCGGCGCTCGACCAGTGGCGTGAAAATC CCGATGTGCTCGCCGTCGTGGTGCGCAGTCAGCACCCGCGCGCGTTTTGCGCGGGCGGCGACGTCCGCTTTCTGTATGAG ACGGCGCAACGCGGCGAGCCCGACGCGCGCGACACGTTTTTCATCGAGGAATACCGGCTCAATCACGCGATCTTCACTTA TCCGAAGCCGTATATCGCGTTGATGAACGGCGTCGTGATGGGCGGCGGCATGGGTATTTCGCAGGGCGCGCATCGCACCG GCGGCCTGCGCGTCGTTACCGACTCGACCAGAATGGCCATGCCCGAAACCCGCATCGGACTCTTTCCCGATGTCGGCGCG AGCTGGTTTCTGGCCCGCACGCCAGGCGCGATCGGGCGCTATCTGGCCGTGACCGGCGAGACGATCGACGCGGCCGACGC GCTCTACGCGGGTCTGGCCGACACCTACATCGAGGACGCGGCATTGCCCGCGCTCGTCGATACGCTGCGCAGCGAGCTGT TCGAGCGAGGCGCTGACGTGGTAGCGTGCATCGAACGTGAGGCGCTGGCGCACCAGGTCGTGCCGCGGCCCGAGGCGTCG TTGCTGGCGAACGCGCGTGCGCTGATCGACCGCCACTTCGCGTTACCCGATGTCGCGCGGATTCTCGCCTCGCTCGAAAG CGAGCGCAACGGCGAGGCCGCCGATTGGGCCGAACAGATGATCGCGATCTTGCGCGAACGTTCGCCGTTGTCGATGGCGG TGTCGCTGGAAGTGGTGACGCGTGCCGAGGGTTCAATGGCGGACGTGCTGCGCTGCGACCTCGATCTGACACGTTCGAGC TTTCTGCATGGCGACACGATCGAAGGCATTCGCGCGCGCATCATCGACAAGGACAACGCGCCGCGCTGGCGCTTTGCGCG CATTGAAGACGTGAGCGCCGCCGAGGTCGGGAAGATGTTCGAGAGTCCGTGGCCGGCCAGCGAACACCCGTTGCGGGATT TGCGCGGTTAG
Upstream 100 bases:
>100_bases GCAACGGCCGGTGTCGACGCGCCCGCCGTCAGGCGCAAAGCCGCGAGTGCGTGATAACGTTCAATTCCACCTCACTTTGC GCCGTTGCGCTTAGCTCCCC
Downstream 100 bases:
>100_bases GCTCCAAGCCCGGCACAGCGGGAAACTGCGCCGGCTTGCGCGCGTTCATTCTTCCTCTTCGCTCGCCATGAACGCGCGCA TGAACACCAGCGCGCCCCAG
Product: 3-hydroxyisobutyryl-CoA hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSISASPAVSDEVATYVANRIGFIELERPKALNALSTGMIRAIHAALDQWRENPDVLAVVVRSQHPRAFCAGGDVRFLYE TAQRGEPDARDTFFIEEYRLNHAIFTYPKPYIALMNGVVMGGGMGISQGAHRTGGLRVVTDSTRMAMPETRIGLFPDVGA SWFLARTPGAIGRYLAVTGETIDAADALYAGLADTYIEDAALPALVDTLRSELFERGADVVACIEREALAHQVVPRPEAS LLANARALIDRHFALPDVARILASLESERNGEAADWAEQMIAILRERSPLSMAVSLEVVTRAEGSMADVLRCDLDLTRSS FLHGDTIEGIRARIIDKDNAPRWRFARIEDVSAAEVGKMFESPWPASEHPLRDLRG
Sequences:
>Translated_376_residues MSISASPAVSDEVATYVANRIGFIELERPKALNALSTGMIRAIHAALDQWRENPDVLAVVVRSQHPRAFCAGGDVRFLYE TAQRGEPDARDTFFIEEYRLNHAIFTYPKPYIALMNGVVMGGGMGISQGAHRTGGLRVVTDSTRMAMPETRIGLFPDVGA SWFLARTPGAIGRYLAVTGETIDAADALYAGLADTYIEDAALPALVDTLRSELFERGADVVACIEREALAHQVVPRPEAS LLANARALIDRHFALPDVARILASLESERNGEAADWAEQMIAILRERSPLSMAVSLEVVTRAEGSMADVLRCDLDLTRSS FLHGDTIEGIRARIIDKDNAPRWRFARIEDVSAAEVGKMFESPWPASEHPLRDLRG >Mature_375_residues SISASPAVSDEVATYVANRIGFIELERPKALNALSTGMIRAIHAALDQWRENPDVLAVVVRSQHPRAFCAGGDVRFLYET AQRGEPDARDTFFIEEYRLNHAIFTYPKPYIALMNGVVMGGGMGISQGAHRTGGLRVVTDSTRMAMPETRIGLFPDVGAS WFLARTPGAIGRYLAVTGETIDAADALYAGLADTYIEDAALPALVDTLRSELFERGADVVACIEREALAHQVVPRPEASL LANARALIDRHFALPDVARILASLESERNGEAADWAEQMIAILRERSPLSMAVSLEVVTRAEGSMADVLRCDLDLTRSSF LHGDTIEGIRARIIDKDNAPRWRFARIEDVSAAEVGKMFESPWPASEHPLRDLRG
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=363, Percent_Identity=31.9559228650138, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI37594469, Length=323, Percent_Identity=31.2693498452012, Blast_Score=178, Evalue=6e-45, Organism=Homo sapiens, GI194097323, Length=192, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI1788682, Length=190, Percent_Identity=30, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI221142681, Length=181, Percent_Identity=29.8342541436464, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25144157, Length=373, Percent_Identity=38.3378016085791, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI25144160, Length=373, Percent_Identity=38.3378016085791, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17540714, Length=183, Percent_Identity=27.8688524590164, Blast_Score=71, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6320241, Length=378, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=3e-34, Organism=Drosophila melanogaster, GI28571729, Length=361, Percent_Identity=36.8421052631579, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI28571730, Length=361, Percent_Identity=36.8421052631579, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI24653139, Length=182, Percent_Identity=30.2197802197802, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129971, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24653477, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 41156; Mature: 41025
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISASPAVSDEVATYVANRIGFIELERPKALNALSTGMIRAIHAALDQWRENPDVLAVV CCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE VRSQHPRAFCAGGDVRFLYETAQRGEPDARDTFFIEEYRLNHAIFTYPKPYIALMNGVVM EECCCCCEEECCCCEEEEEHHHHCCCCCCCCCEEEEEEECCCEEEECCCHHHHHHCCCCC GGGMGISQGAHRTGGLRVVTDSTRMAMPETRIGLFPDVGASWFLARTPGAIGRYLAVTGE CCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEEECCCCHHCCEEEEECC TIDAADALYAGLADTYIEDAALPALVDTLRSELFERGADVVACIEREALAHQVVPRPEAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH LLANARALIDRHFALPDVARILASLESERNGEAADWAEQMIAILRERSPLSMAVSLEVVT HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEE RAEGSMADVLRCDLDLTRSSFLHGDTIEGIRARIIDKDNAPRWRFARIEDVSAAEVGKMF CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCEEEEEECCCCHHHHHHHH ESPWPASEHPLRDLRG CCCCCCCCCCHHHHCC >Mature Secondary Structure SISASPAVSDEVATYVANRIGFIELERPKALNALSTGMIRAIHAALDQWRENPDVLAVV CCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE VRSQHPRAFCAGGDVRFLYETAQRGEPDARDTFFIEEYRLNHAIFTYPKPYIALMNGVVM EECCCCCEEECCCCEEEEEHHHHCCCCCCCCCEEEEEEECCCEEEECCCHHHHHHCCCCC GGGMGISQGAHRTGGLRVVTDSTRMAMPETRIGLFPDVGASWFLARTPGAIGRYLAVTGE CCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEEECCCCHHCCEEEEECC TIDAADALYAGLADTYIEDAALPALVDTLRSELFERGADVVACIEREALAHQVVPRPEAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH LLANARALIDRHFALPDVARILASLESERNGEAADWAEQMIAILRERSPLSMAVSLEVVT HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEE RAEGSMADVLRCDLDLTRSSFLHGDTIEGIRARIIDKDNAPRWRFARIEDVSAAEVGKMF CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCEEEEEECCCCHHHHHHHH ESPWPASEHPLRDLRG CCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]