Click here to switch to the map view.

The map label for this gene is yieP [H]

Identifier: 91783307

GI number: 91783307

Start: 2158525

End: 2159244

Strand: Direct

Name: yieP [H]

Synonym: Bxe_A2512

Alternate gene names: 91783307

Gene position: 2158525-2159244 (Clockwise)

Preceding gene: 91783306

Following gene: 91783308

Centisome position: 44.09

GC content: 63.33

Gene sequence:

>720_bases
ATGGAACAGGCAAACAAAGATCGATCGCTCGTGAGCAAAGTCATGGATGGACTGGTCACGGGCATCGTCGAAGAGAAATA
CGGCGCCATACTGCCACCGCAGGATGTGCTGTCCAAGGAGTTCGATGTCAGCCGCACCGTCATGCGCGAGGCGCTGTCGA
TGCTGCTCGCGCGCGACATGCTGGACGTGCGGCCCAAAATCGGCACGCGCATCCGGCCGATGAGCGATTGGCGCATGATC
GACGAGGACGTCGTGAACTGGCGTTTTCGCGCGAAACCCGATCCGCTGTTTCTGCGCGACGTGATCGAGTTTCGCATCCT
GATCGAGCCGCGCGCTTCGGCGCAGGCGGCCGCGCGCGGCAGCGCGGCGGATATCGCGGCGATTCGCGAGGCGTTCGAGG
CATTCCGCGCGATCCGCCCCGGCGAGCCGGGCTATCAGGAAGCGGATGAACTGTTCCACGCCCGCATCGTGGTCGCGAGC
GGCAACCAGTTCTTCAAGCAGATGGCCGCGATCATTCGCGGTGCGCTTTCGACCGTCAACCCCATCGTCACCGACCGTGA
CGGACTGTGGGAAACGGCGGTCAATTCACACCAGCGCGTGGTGGACGCGATCGAGCGGCATGATCCGAAAGAAGCGGAAA
TCGCCTCGCTCGCCATGATCGATTACACCGCGGAAGAAGTCGGCAGCCAGTTTTCGGCGGAACCGCCGGCACGCGGCTGA

Upstream 100 bases:

>100_bases
ACGTATCGTAGAAGAACAAAGTCACACTCATAAAACGACACACAAGGGCCGCTCGATCAACAGGCTACGCGGGGGCAAAC
ACCGCTTCGGGGAGAGTGTC

Downstream 100 bases:

>100_bases
GCGTGGCCGCTGCGGCGGCACGGCGGCTCGCCGATTGTTCCTCGTGAGACTGTGCAGCACGAAGGGCGCGAGTTCAGGCC
CACGCGGGAGCGTGCGGCAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MEQANKDRSLVSKVMDGLVTGIVEEKYGAILPPQDVLSKEFDVSRTVMREALSMLLARDMLDVRPKIGTRIRPMSDWRMI
DEDVVNWRFRAKPDPLFLRDVIEFRILIEPRASAQAAARGSAADIAAIREAFEAFRAIRPGEPGYQEADELFHARIVVAS
GNQFFKQMAAIIRGALSTVNPIVTDRDGLWETAVNSHQRVVDAIERHDPKEAEIASLAMIDYTAEEVGSQFSAEPPARG

Sequences:

>Translated_239_residues
MEQANKDRSLVSKVMDGLVTGIVEEKYGAILPPQDVLSKEFDVSRTVMREALSMLLARDMLDVRPKIGTRIRPMSDWRMI
DEDVVNWRFRAKPDPLFLRDVIEFRILIEPRASAQAAARGSAADIAAIREAFEAFRAIRPGEPGYQEADELFHARIVVAS
GNQFFKQMAAIIRGALSTVNPIVTDRDGLWETAVNSHQRVVDAIERHDPKEAEIASLAMIDYTAEEVGSQFSAEPPARG
>Mature_239_residues
MEQANKDRSLVSKVMDGLVTGIVEEKYGAILPPQDVLSKEFDVSRTVMREALSMLLARDMLDVRPKIGTRIRPMSDWRMI
DEDVVNWRFRAKPDPLFLRDVIEFRILIEPRASAQAAARGSAADIAAIREAFEAFRAIRPGEPGYQEADELFHARIVVAS
GNQFFKQMAAIIRGALSTVNPIVTDRDGLWETAVNSHQRVVDAIERHDPKEAEIASLAMIDYTAEEVGSQFSAEPPARG

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=228, Percent_Identity=30.2631578947368, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI48994955, Length=215, Percent_Identity=28.3720930232558, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26693; Mature: 26693

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQANKDRSLVSKVMDGLVTGIVEEKYGAILPPQDVLSKEFDVSRTVMREALSMLLARDM
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDVRPKIGTRIRPMSDWRMIDEDVVNWRFRAKPDPLFLRDVIEFRILIEPRASAQAAARG
HHHCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHEECCCCHHHHHHCC
SAADIAAIREAFEAFRAIRPGEPGYQEADELFHARIVVASGNQFFKQMAAIIRGALSTVN
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHC
PIVTDRDGLWETAVNSHQRVVDAIERHDPKEAEIASLAMIDYTAEEVGSQFSAEPPARG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEQANKDRSLVSKVMDGLVTGIVEEKYGAILPPQDVLSKEFDVSRTVMREALSMLLARDM
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDVRPKIGTRIRPMSDWRMIDEDVVNWRFRAKPDPLFLRDVIEFRILIEPRASAQAAARG
HHHCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHEECCCCHHHHHHCC
SAADIAAIREAFEAFRAIRPGEPGYQEADELFHARIVVASGNQFFKQMAAIIRGALSTVN
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHC
PIVTDRDGLWETAVNSHQRVVDAIERHDPKEAEIASLAMIDYTAEEVGSQFSAEPPARG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]