| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is xanB [H]
Identifier: 91783305
GI number: 91783305
Start: 2156031
End: 2157623
Strand: Direct
Name: xanB [H]
Synonym: Bxe_A2514
Alternate gene names: 91783305
Gene position: 2156031-2157623 (Clockwise)
Preceding gene: 91783304
Following gene: 91783306
Centisome position: 44.04
GC content: 68.8
Gene sequence:
>1593_bases ATGAATCGCATCGTAGAACCAGGCAATCCGCTCGCGGCGACCGCGAGCGTTACCGGAACGGCCACGCGTTTGTCCGTGCA GCCGGTGATACTCGCAGGCGGCTCGGGGACGCGATTGTGGCCGCTGTCGCGCGAACGCAATCCGAAGCAACTGATCGGCC TGATGGGCGACGAGTCGCTGCTCGAAAGGACCCTGCGCCGGCTCGACGCGTCGTTCGCCGCGGTGGAGCACGAAACGCCG GCAGCCGGCACGCGCCTTATCGCGGCGCCGCTGGTGGTCTGCTGCGAGGACTTGCGGCTGCAAACGCTCGAACGTCTGCA ACGCCTGGAGAGGCCGGGCCGGCCGGTGCGCATGGTGCTCGAACCGGTGCCGCGCAACACCGCGCCCGCGCTGACGGTGG CGGCGCTGGCGGCGCGCGCGGCGGCTGTCGAGGGCGACGATCCGGTCATCGTGGCGCTGCCGGCGGATCACCTGATCGGC GATCACGTTGCGTTCGGCAAGGCGCTCGCCGAGGCGCTCGAACACGCGGCGGCGGGCGCGATCGTCACGCTCGGCGTGCC GCCGAAGCGCGCGGAGACCGGCTACGGCTATATCCGCACGGGTACGGCGCTCGGCACGCGGGGCGCGCGCGTCATCGAGC GGTTCGTCGAGAAGCCCGATCCGGAACTCGCGGAGCGCTACGTCGCGTCCGGGGATTACTGGTGGAATAGCGGCATGTTC GTGGTGCGCGCTTCCGTGTGGCTCGCGGCGATCGAGTTGTGCCAGCCGGCGATCGCCGCAGCCTGCGCGGACGCGTTCGA GCAGGCCACGGTGGACGGCGACGGCGCCCTGCATCTCGCGCGCAAGGCGTTCGCCCTGTGCCCGTCCGATTCGATCGACT ACGCGGTGATGGAGCGTGTGGCCACCGACGCGCGGCTGGTCGGCGTGGCCGTCCCGCTCGTCGCGGGTTGGTCGGACGTG GGTGCGTGGGATTCGGTGTGGGAAGCGTCCGCGAAAGACGCCGACGGCAATGTCGCGCGCGGCCGCGTGATGTTCGCCGG CTCGACCGACAGCTTCGCGCATTCGGAGGGCCGGCTCGTCGCCTGTGTCGGCGTGAGCGGCGTGATGGTGGTCGAAACCG CCGACGCAGTGCTGGTCGTCGCGAAAGACCGCGTGCAGGACGTCAAGGCGGTGGTCAGCCGTCTCAAGCTGGAGCACGGC GCGGAAGCACAGGAGCATCGCAAGGTCGGCCGGCCGTGGGGTTATTACGACTCGCTCGAACGCGGCGCGCGCTTTCAGGT GAAGCGCATCGTCGTCAAGCCGGGCGGCCGTCTTTCGCTGCAGATGCATCATCACCGCGCCGAACACTGGATCGTGGTGC GCGGCACGGCGCGCGTCACGCGCGGCGAGGAATGCTTCTTTCTCACGGAGAATCAGTCCACTTACATTCCGCTGGGCGTT ACGCACCGGCTGGAGAATCCGGGCAAGACTTCGCTCGAAATGATCGAGGTGCAATCGGGCGGCTACCTCGGCGAAGACGA CATCGTGCGTTTCGACGACCAGTACGGTCGCGATCAGGAGAGCGGCCATGCAGGCAAGGGTACGTCACGCTGA
Upstream 100 bases:
>100_bases CAAAGATGAAGCAAAGAAAGACACGGCATCGCCCGCAGCGCGCGGACGACTCCCTGCAACAAAGAACCGCGCCAGTTTGA CCATACACGGGGAATCGCAA
Downstream 100 bases:
>100_bases AGCACCGCAGCCCGCGCAGGCGGCGGCTTTCGACGAGCGGCGCTTCCGTCATGCGCTGGGGCGCTTCGCGACCGGCGTCG TGGTGATCTCGACGGGCAGC
Product: mannose-1-phosphate guanylyltransferase (GDP)
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MNRIVEPGNPLAATASVTGTATRLSVQPVILAGGSGTRLWPLSRERNPKQLIGLMGDESLLERTLRRLDASFAAVEHETP AAGTRLIAAPLVVCCEDLRLQTLERLQRLERPGRPVRMVLEPVPRNTAPALTVAALAARAAAVEGDDPVIVALPADHLIG DHVAFGKALAEALEHAAAGAIVTLGVPPKRAETGYGYIRTGTALGTRGARVIERFVEKPDPELAERYVASGDYWWNSGMF VVRASVWLAAIELCQPAIAAACADAFEQATVDGDGALHLARKAFALCPSDSIDYAVMERVATDARLVGVAVPLVAGWSDV GAWDSVWEASAKDADGNVARGRVMFAGSTDSFAHSEGRLVACVGVSGVMVVETADAVLVVAKDRVQDVKAVVSRLKLEHG AEAQEHRKVGRPWGYYDSLERGARFQVKRIVVKPGGRLSLQMHHHRAEHWIVVRGTARVTRGEECFFLTENQSTYIPLGV THRLENPGKTSLEMIEVQSGGYLGEDDIVRFDDQYGRDQESGHAGKGTSR
Sequences:
>Translated_530_residues MNRIVEPGNPLAATASVTGTATRLSVQPVILAGGSGTRLWPLSRERNPKQLIGLMGDESLLERTLRRLDASFAAVEHETP AAGTRLIAAPLVVCCEDLRLQTLERLQRLERPGRPVRMVLEPVPRNTAPALTVAALAARAAAVEGDDPVIVALPADHLIG DHVAFGKALAEALEHAAAGAIVTLGVPPKRAETGYGYIRTGTALGTRGARVIERFVEKPDPELAERYVASGDYWWNSGMF VVRASVWLAAIELCQPAIAAACADAFEQATVDGDGALHLARKAFALCPSDSIDYAVMERVATDARLVGVAVPLVAGWSDV GAWDSVWEASAKDADGNVARGRVMFAGSTDSFAHSEGRLVACVGVSGVMVVETADAVLVVAKDRVQDVKAVVSRLKLEHG AEAQEHRKVGRPWGYYDSLERGARFQVKRIVVKPGGRLSLQMHHHRAEHWIVVRGTARVTRGEECFFLTENQSTYIPLGV THRLENPGKTSLEMIEVQSGGYLGEDDIVRFDDQYGRDQESGHAGKGTSR >Mature_530_residues MNRIVEPGNPLAATASVTGTATRLSVQPVILAGGSGTRLWPLSRERNPKQLIGLMGDESLLERTLRRLDASFAAVEHETP AAGTRLIAAPLVVCCEDLRLQTLERLQRLERPGRPVRMVLEPVPRNTAPALTVAALAARAAAVEGDDPVIVALPADHLIG DHVAFGKALAEALEHAAAGAIVTLGVPPKRAETGYGYIRTGTALGTRGARVIERFVEKPDPELAERYVASGDYWWNSGMF VVRASVWLAAIELCQPAIAAACADAFEQATVDGDGALHLARKAFALCPSDSIDYAVMERVATDARLVGVAVPLVAGWSDV GAWDSVWEASAKDADGNVARGRVMFAGSTDSFAHSEGRLVACVGVSGVMVVETADAVLVVAKDRVQDVKAVVSRLKLEHG AEAQEHRKVGRPWGYYDSLERGARFQVKRIVVKPGGRLSLQMHHHRAEHWIVVRGTARVTRGEECFFLTENQSTYIPLGV THRLENPGKTSLEMIEVQSGGYLGEDDIVRFDDQYGRDQESGHAGKGTSR
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=497, Percent_Identity=48.8933601609658, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 57014; Mature: 57014
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIVEPGNPLAATASVTGTATRLSVQPVILAGGSGTRLWPLSRERNPKQLIGLMGDESL CCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCEEEECCCCCCHHHHHEECCCHHH LERTLRRLDASFAAVEHETPAAGTRLIAAPLVVCCEDLRLQTLERLQRLERPGRPVRMVL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE EPVPRNTAPALTVAALAARAAAVEGDDPVIVALPADHLIGDHVAFGKALAEALEHAAAGA ECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCE IVTLGVPPKRAETGYGYIRTGTALGTRGARVIERFVEKPDPELAERYVASGDYWWNSGMF EEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCEE VVRASVWLAAIELCQPAIAAACADAFEQATVDGDGALHLARKAFALCPSDSIDYAVMERV EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH ATDARLVGVAVPLVAGWSDVGAWDSVWEASAKDADGNVARGRVMFAGSTDSFAHSEGRLV HCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCCCEE ACVGVSGVMVVETADAVLVVAKDRVQDVKAVVSRLKLEHGAEAQEHRKVGRPWGYYDSLE EEECCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHH RGARFQVKRIVVKPGGRLSLQMHHHRAEHWIVVRGTARVTRGEECFFLTENQSTYIPLGV CCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCEEEECCCEEEEEECCCCEEEEEEE THRLENPGKTSLEMIEVQSGGYLGEDDIVRFDDQYGRDQESGHAGKGTSR EECCCCCCCCCEEEEEEECCCCCCCCCEEEECHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRIVEPGNPLAATASVTGTATRLSVQPVILAGGSGTRLWPLSRERNPKQLIGLMGDESL CCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCEEEECCCCCCHHHHHEECCCHHH LERTLRRLDASFAAVEHETPAAGTRLIAAPLVVCCEDLRLQTLERLQRLERPGRPVRMVL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE EPVPRNTAPALTVAALAARAAAVEGDDPVIVALPADHLIGDHVAFGKALAEALEHAAAGA ECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCE IVTLGVPPKRAETGYGYIRTGTALGTRGARVIERFVEKPDPELAERYVASGDYWWNSGMF EEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCEE VVRASVWLAAIELCQPAIAAACADAFEQATVDGDGALHLARKAFALCPSDSIDYAVMERV EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH ATDARLVGVAVPLVAGWSDVGAWDSVWEASAKDADGNVARGRVMFAGSTDSFAHSEGRLV HCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCCCEE ACVGVSGVMVVETADAVLVVAKDRVQDVKAVVSRLKLEHGAEAQEHRKVGRPWGYYDSLE EEECCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHH RGARFQVKRIVVKPGGRLSLQMHHHRAEHWIVVRGTARVTRGEECFFLTENQSTYIPLGV CCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCEEEECCCEEEEEECCCCEEEEEEE THRLENPGKTSLEMIEVQSGGYLGEDDIVRFDDQYGRDQESGHAGKGTSR EECCCCCCCCCEEEEEEECCCCCCCCCEEEECHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]