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The map label for this gene is ygjM [C]

Identifier: 91783284

GI number: 91783284

Start: 2128406

End: 2128828

Strand: Direct

Name: ygjM [C]

Synonym: Bxe_A2534

Alternate gene names: 91783284

Gene position: 2128406-2128828 (Clockwise)

Preceding gene: 91783283

Following gene: 91783294

Centisome position: 43.47

GC content: 59.57

Gene sequence:

>423_bases
ATGAATGCCGATCGCCTTCCGGGAGGTTTTCCCGACATCGCACAAACCTGGGCCACGCTGCAAGCCCAGTTGCCGATCAC
GCCCATTCGCAACGAGCAGGACTACCAGACAATGGTGCGGCTCGCCAACTCGCTTGCCGATCATCTGAACGGCAACGAGG
AGGATCCGCTGTCCGATCTGTTCGCGATCGTGACGGACCTGATCGAGAGCTGGGAAGCGCACAACGTCACGATTCCAAAA
GCGGAGCCGCGCGAGGTGTTGCGTCATTTGCTGGAAACGCATGGGCTCAGGCAGAAGGACCTGATAGGTATCGCATCGCC
CACCGTGGTGAGCGATATTCTTGCGGGCCGCCGCGCCATCAGCAAGAAGGTGGCCAAGGCCCTGGCCGTGCGTTTTCATA
CCGACGTCAGTGCGTTTCTGTAA

Upstream 100 bases:

>100_bases
GGATCGTTGCGGCGATTCACTACAACAGGCAGTCGTTATTCGTTCGTCATGTATTGACGCATGCGGAGTACGACCTTTGG
ACGAGGAAGAATCTAAACTC

Downstream 100 bases:

>100_bases
GAACGGTGCCGCGCCGGCCTTGTGCCGTGCGCTGCGCTGACCGGCAAGCTTTTTCCCGTCCTTCACTTCGCTTCGGTTCA
CTTCGGTTCTATCCATGCGC

Product: putative HTH-type transcriptional regulator,YgjM- like

Products: NA

Alternate protein names: Transcription Regulator With HTH Domain; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator; HTH Domain-Containing Transcriptional Regulator; HTH-Type Transcriptional Regulator YgjM- Like; HTH-Type Transcriptional Regulator YgjM-Like

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNADRLPGGFPDIAQTWATLQAQLPITPIRNEQDYQTMVRLANSLADHLNGNEEDPLSDLFAIVTDLIESWEAHNVTIPK
AEPREVLRHLLETHGLRQKDLIGIASPTVVSDILAGRRAISKKVAKALAVRFHTDVSAFL

Sequences:

>Translated_140_residues
MNADRLPGGFPDIAQTWATLQAQLPITPIRNEQDYQTMVRLANSLADHLNGNEEDPLSDLFAIVTDLIESWEAHNVTIPK
AEPREVLRHLLETHGLRQKDLIGIASPTVVSDILAGRRAISKKVAKALAVRFHTDVSAFL
>Mature_140_residues
MNADRLPGGFPDIAQTWATLQAQLPITPIRNEQDYQTMVRLANSLADHLNGNEEDPLSDLFAIVTDLIESWEAHNVTIPK
AEPREVLRHLLETHGLRQKDLIGIASPTVVSDILAGRRAISKKVAKALAVRFHTDVSAFL

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15498; Mature: 15498

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADRLPGGFPDIAQTWATLQAQLPITPIRNEQDYQTMVRLANSLADHLNGNEEDPLSDL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FAIVTDLIESWEAHNVTIPKAEPREVLRHLLETHGLRQKDLIGIASPTVVSDILAGRRAI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHH
SKKVAKALAVRFHTDVSAFL
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNADRLPGGFPDIAQTWATLQAQLPITPIRNEQDYQTMVRLANSLADHLNGNEEDPLSDL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FAIVTDLIESWEAHNVTIPKAEPREVLRHLLETHGLRQKDLIGIASPTVVSDILAGRRAI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHH
SKKVAKALAVRFHTDVSAFL
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA