| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hspC2 [H]
Identifier: 91783245
GI number: 91783245
Start: 2082783
End: 2083220
Strand: Direct
Name: hspC2 [H]
Synonym: Bxe_A2580
Alternate gene names: 91783245
Gene position: 2082783-2083220 (Clockwise)
Preceding gene: 91783242
Following gene: 91783246
Centisome position: 42.54
GC content: 61.64
Gene sequence:
>438_bases ATGAGTGATCTCTACTTCGGGAACGATCTCTTCAGCGAGTTCGACCGCCTTCAGCGGCAGATCGACGAACTCTTCGGGGA CTTCCCGTCCAGCATCCGCTCCGTCAGGCGTGGTGCGTTCCCGCAGGTCAACATCGGCGCCACCGACGACACCATCGAGA TCGTCGCATTCGCACCAGGCATGACGGCCGCTGACCTCGAGGTTTCGATCGACAAGGGCTTGCTGACGATCAGCGGCGAA CGCAAACCCCCGGTGTCCGACGACATCGACCGGAAGATCTACGCTCAGGAGCGCTTCGCTGGCGCGTTCCGGCGGGTCAT CGAACTCCCTCAGAACGTGAATCCTGACAAGGTGCAGGCGCGGTATGTCGACGGCTGTCTGTGTGTGACGGTCGGCAAGC GTGAGTCGTCCACGCCCCGGTCGATTACGGTCCAATGA
Upstream 100 bases:
>100_bases GGCGCGCTGCGTTTCATTTTGTTTGTCAGCTATCTGGCAGGCGGACTGGAGCGCATAAGCCCGTTCGCCTCCAGTTTGTG GACGAAAGGAGGATACGACC
Downstream 100 bases:
>100_bases TCTGAGGAGGTAGCCATGAGCAATGCAACTCAAGTTGTCGAGCACGAGGCGCAAACCAGTGGGGTGCAAAGCACGCCGGC GAAGTCCGTGGAGCGCCGCA
Product: putative small heat shock protein, Hsp20-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSDLYFGNDLFSEFDRLQRQIDELFGDFPSSIRSVRRGAFPQVNIGATDDTIEIVAFAPGMTAADLEVSIDKGLLTISGE RKPPVSDDIDRKIYAQERFAGAFRRVIELPQNVNPDKVQARYVDGCLCVTVGKRESSTPRSITVQ
Sequences:
>Translated_145_residues MSDLYFGNDLFSEFDRLQRQIDELFGDFPSSIRSVRRGAFPQVNIGATDDTIEIVAFAPGMTAADLEVSIDKGLLTISGE RKPPVSDDIDRKIYAQERFAGAFRRVIELPQNVNPDKVQARYVDGCLCVTVGKRESSTPRSITVQ >Mature_144_residues SDLYFGNDLFSEFDRLQRQIDELFGDFPSSIRSVRRGAFPQVNIGATDDTIEIVAFAPGMTAADLEVSIDKGLLTISGER KPPVSDDIDRKIYAQERFAGAFRRVIELPQNVNPDKVQARYVDGCLCVTVGKRESSTPRSITVQ
Specific function: Unknown
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002068 - InterPro: IPR008978 [H]
Pfam domain/function: PF00011 HSP20 [H]
EC number: NA
Molecular weight: Translated: 16146; Mature: 16015
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLYFGNDLFSEFDRLQRQIDELFGDFPSSIRSVRRGAFPQVNIGATDDTIEIVAFAPG CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEECCC MTAADLEVSIDKGLLTISGERKPPVSDDIDRKIYAQERFAGAFRRVIELPQNVNPDKVQA CCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEH RYVDGCLCVTVGKRESSTPRSITVQ EEECCEEEEEECCCCCCCCCEEEEC >Mature Secondary Structure SDLYFGNDLFSEFDRLQRQIDELFGDFPSSIRSVRRGAFPQVNIGATDDTIEIVAFAPG CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEECCC MTAADLEVSIDKGLLTISGERKPPVSDDIDRKIYAQERFAGAFRRVIELPQNVNPDKVQA CCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEH RYVDGCLCVTVGKRESSTPRSITVQ EEECCEEEEEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA