| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mdtA [H]
Identifier: 91783242
GI number: 91783242
Start: 2080354
End: 2081583
Strand: Direct
Name: mdtA [H]
Synonym: Bxe_A2584
Alternate gene names: 91783242
Gene position: 2080354-2081583 (Clockwise)
Preceding gene: 91783241
Following gene: 91783245
Centisome position: 42.49
GC content: 58.78
Gene sequence:
>1230_bases ATGAACGAACAAACTTCCATTTCGCGCGTCATTCCCGCGCAGCCAAGGACCGGACTTGGTGCCTTCGAGCCCCGGGTGCC GGAACGAGCGGGTGCAATAATTGGCGGCGCGATTGTTCTTGCCCTGGTAGCACTGGGCATCGTACACGTATTCGTCTCCG GCCTGATGACGAGTACACCGGGCTATGTAAAGCCACAGGACGACGGCAGCACGCAGTACGTCAATGTGGTGTTGCCAAAA AAGGTATCGGGCAGCGGTGAAATCTTCTTGCCTGGCACGCTACACGGATACATCGAATCCCCGATCTATTCCCGGGCAAC AGGTTACGTGTTGCACTGGTACGCTGATATTGGCACGCGAGTGACAAGGGGGCAGGTGCTTGCGATTCTGGACACACCGG AGATCGACCAGGAACTGGCACAGGCCATCGCGCAACGGAACGAGGCGAACGCGACTCTGGCACTTGCCAGGACTTCATAC GAGCGCTGGCAGGAACTTCGCGAACACGATGTAGCGTCCGAGCAGGCACTGGAAGAGCGCCAGAGCACATATATGCAGGA CGTTGCCAGTCTCGAGGCAGCCGACGCCAACGTGCAGCGTCTGCGGCAACTGGAGGCGTTCAAGCGCATCGTAGCGCCGT TCTCCGGCGTCATCACCCAGCGCAATGTCGACATAGGCGACCTGGTCTATGCAGGCAATGTGTCGGGCCGCGCGCTCTTT GCGATGGTGCAGGCGGACCCGCTGAGGGTGTATGTGCAGCTACCGCAGGCTTACGCACAGAATGTGAAGCAGGGGCAGGA CGTGACGGTTACACAGGCTGAATTGCCTGGGCAACGGTTCCACGGCTCGATTGCTCATATCTCCGGCGCAATCGATGCCT CGACCCGTTCGCTGCAGCTGGAAGTGAGATTACCCAACCCCGATAACAGGCTGAGACCAGGTGCGTATGTACAGGTGGCG CTACGGCTCTCTGCTGACGGGCCGCTTCTCGTTCCGGACAATGTGCTGGTGTTTCGTTCGGAAGGGCCTCGCGTGGCGGT CGTCGGTCAGGATGGCAAAGTTCAGTTACGGAAAATCGTCATTCGTCGCGACCTGGGCGAGTCGCTTGAGATCGAAAGCG GTATCGGTCCAGCGGACAAGATCATTATCAACCCCAGCGATTCCATCGCCGATGGAGAGCACGTGCGCATCGTTCCTGGC CAACAGATGGTGAGATTACCAACGTCGTAA
Upstream 100 bases:
>100_bases CAGTGCCCGATAGCCTGGCTTCCAGTGGCCGCGGTTCCCGGGAAAGGCGTGTCCCGACCGATTCGTGACGGCCACCATGA TTGCCACCCAGGTGAATGAC
Downstream 100 bases:
>100_bases AGCAGGGGCTCAAATGAAGTCGACCTATACGAGGCCAAAAACCGCATGCCTGGAAGGCAGGACGAATTCGAACCGCGGAC CAGTTCGAGCAGCGCCTGCA
Product: CzcB subfamily membrane fusion protein
Products: NA
Alternate protein names: Multidrug transporter mdtA [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNEQTSISRVIPAQPRTGLGAFEPRVPERAGAIIGGAIVLALVALGIVHVFVSGLMTSTPGYVKPQDDGSTQYVNVVLPK KVSGSGEIFLPGTLHGYIESPIYSRATGYVLHWYADIGTRVTRGQVLAILDTPEIDQELAQAIAQRNEANATLALARTSY ERWQELREHDVASEQALEERQSTYMQDVASLEAADANVQRLRQLEAFKRIVAPFSGVITQRNVDIGDLVYAGNVSGRALF AMVQADPLRVYVQLPQAYAQNVKQGQDVTVTQAELPGQRFHGSIAHISGAIDASTRSLQLEVRLPNPDNRLRPGAYVQVA LRLSADGPLLVPDNVLVFRSEGPRVAVVGQDGKVQLRKIVIRRDLGESLEIESGIGPADKIIINPSDSIADGEHVRIVPG QQMVRLPTS
Sequences:
>Translated_409_residues MNEQTSISRVIPAQPRTGLGAFEPRVPERAGAIIGGAIVLALVALGIVHVFVSGLMTSTPGYVKPQDDGSTQYVNVVLPK KVSGSGEIFLPGTLHGYIESPIYSRATGYVLHWYADIGTRVTRGQVLAILDTPEIDQELAQAIAQRNEANATLALARTSY ERWQELREHDVASEQALEERQSTYMQDVASLEAADANVQRLRQLEAFKRIVAPFSGVITQRNVDIGDLVYAGNVSGRALF AMVQADPLRVYVQLPQAYAQNVKQGQDVTVTQAELPGQRFHGSIAHISGAIDASTRSLQLEVRLPNPDNRLRPGAYVQVA LRLSADGPLLVPDNVLVFRSEGPRVAVVGQDGKVQLRKIVIRRDLGESLEIESGIGPADKIIINPSDSIADGEHVRIVPG QQMVRLPTS >Mature_409_residues MNEQTSISRVIPAQPRTGLGAFEPRVPERAGAIIGGAIVLALVALGIVHVFVSGLMTSTPGYVKPQDDGSTQYVNVVLPK KVSGSGEIFLPGTLHGYIESPIYSRATGYVLHWYADIGTRVTRGQVLAILDTPEIDQELAQAIAQRNEANATLALARTSY ERWQELREHDVASEQALEERQSTYMQDVASLEAADANVQRLRQLEAFKRIVAPFSGVITQRNVDIGDLVYAGNVSGRALF AMVQADPLRVYVQLPQAYAQNVKQGQDVTVTQAELPGQRFHGSIAHISGAIDASTRSLQLEVRLPNPDNRLRPGAYVQVA LRLSADGPLLVPDNVLVFRSEGPRVAVVGQDGKVQLRKIVIRRDLGESLEIESGIGPADKIIINPSDSIADGEHVRIVPG QQMVRLPTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=335, Percent_Identity=24.4776119402985, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1789929, Length=329, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786668, Length=321, Percent_Identity=25.8566978193146, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87081796, Length=316, Percent_Identity=25, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789665, Length=328, Percent_Identity=26.219512195122, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786787, Length=192, Percent_Identity=25.5208333333333, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022824 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 44368; Mature: 44368
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQTSISRVIPAQPRTGLGAFEPRVPERAGAIIGGAIVLALVALGIVHVFVSGLMTSTP CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYVKPQDDGSTQYVNVVLPKKVSGSGEIFLPGTLHGYIESPIYSRATGYVLHWYADIGTR CCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHCCCHHHCCCCEEEEEEECCCCE VTRGQVLAILDTPEIDQELAQAIAQRNEANATLALARTSYERWQELREHDVASEQALEER EECCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHH QSTYMQDVASLEAADANVQRLRQLEAFKRIVAPFSGVITQRNVDIGDLVYAGNVSGRALF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCEEE AMVQADPLRVYVQLPQAYAQNVKQGQDVTVTQAELPGQRFHGSIAHISGAIDASTRSLQL EEEECCCEEEEEECCHHHHHHHCCCCCEEEEEHHCCCHHHCCCHHHCCCCCCCCCEEEEE EVRLPNPDNRLRPGAYVQVALRLSADGPLLVPDNVLVFRSEGPRVAVVGQDGKVQLRKIV EEECCCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEECCCCEEEEECCCCCEEHHHHH IRRDLGESLEIESGIGPADKIIINPSDSIADGEHVRIVPGQQMVRLPTS HHHCCCCCEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEECCCC >Mature Secondary Structure MNEQTSISRVIPAQPRTGLGAFEPRVPERAGAIIGGAIVLALVALGIVHVFVSGLMTSTP CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYVKPQDDGSTQYVNVVLPKKVSGSGEIFLPGTLHGYIESPIYSRATGYVLHWYADIGTR CCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHCCCHHHCCCCEEEEEEECCCCE VTRGQVLAILDTPEIDQELAQAIAQRNEANATLALARTSYERWQELREHDVASEQALEER EECCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHH QSTYMQDVASLEAADANVQRLRQLEAFKRIVAPFSGVITQRNVDIGDLVYAGNVSGRALF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCEEE AMVQADPLRVYVQLPQAYAQNVKQGQDVTVTQAELPGQRFHGSIAHISGAIDASTRSLQL EEEECCCEEEEEECCHHHHHHHCCCCCEEEEEHHCCCHHHCCCHHHCCCCCCCCCEEEEE EVRLPNPDNRLRPGAYVQVALRLSADGPLLVPDNVLVFRSEGPRVAVVGQDGKVQLRKIV EEECCCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEECCCCEEEEECCCCCEEHHHHH IRRDLGESLEIESGIGPADKIIINPSDSIADGEHVRIVPGQQMVRLPTS HHHCCCCCEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]