| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91783226
Identifier: 91783226
GI number: 91783226
Start: 2067786
End: 2068193
Strand: Direct
Name: 91783226
Synonym: Bxe_A2601
Alternate gene names: NA
Gene position: 2067786-2068193 (Clockwise)
Preceding gene: 91783225
Following gene: 91783227
Centisome position: 42.24
GC content: 61.76
Gene sequence:
>408_bases ATGAACGACAGGACTCAGGTTGCTGAACGCGACCAGCAAGCCGTAGCACGACGCGAGGGCGACCAGCCGGCACGACGGAT GACGCTCACACCGGCAGTCGACGTGTTCGAGGACAGCCAGGGCATCACGCTGTGGGCGGACCTGCCAGGCGTCACAAAGG ACAAACTCGATGTAAAGGTGCACGACGGAAATCTGTATATCGAGGCTGAAGCGGTTGTGCCGACACCGGCCGGTTTGCGG CTGCAGCATGCCGAGATCCGTGAATCGCGTTTCGCGCGGGCGTTTTCGCTGAGCCCGGACTTCGACACATCGAAGATCGA CGCGAACCTGCAGGATGGCGTGCTGAAGCTGACCATTCCACGCCGCGACGAAGCAAGGCCGCGACGGATCGAGGTGCAGA CGAACTGA
Upstream 100 bases:
>100_bases CTGCCTGTCGATTACCGTCGGCAAGCGCGAAGCGTCCAGGCCGCGTGCCATCACCGTCCAGTAATGCCAGTTGTTAACGC CACTTATCCGGGAGTAAGCC
Downstream 100 bases:
>100_bases GCCCGGAAGACCCGCAACGACGACAGGAGAAAAGCGGTGACGGCCGCGAGGGCGAGGCCGCCGCCGTTCGTGAAGGAGCG GATGAAGAACGTCATGGAAG
Product: Hsp20 family heat-shock protein
Products: NA
Alternate protein names: Clone MAVC83 [H]
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNDRTQVAERDQQAVARREGDQPARRMTLTPAVDVFEDSQGITLWADLPGVTKDKLDVKVHDGNLYIEAEAVVPTPAGLR LQHAEIRESRFARAFSLSPDFDTSKIDANLQDGVLKLTIPRRDEARPRRIEVQTN
Sequences:
>Translated_135_residues MNDRTQVAERDQQAVARREGDQPARRMTLTPAVDVFEDSQGITLWADLPGVTKDKLDVKVHDGNLYIEAEAVVPTPAGLR LQHAEIRESRFARAFSLSPDFDTSKIDANLQDGVLKLTIPRRDEARPRRIEVQTN >Mature_135_residues MNDRTQVAERDQQAVARREGDQPARRMTLTPAVDVFEDSQGITLWADLPGVTKDKLDVKVHDGNLYIEAEAVVPTPAGLR LQHAEIRESRFARAFSLSPDFDTSKIDANLQDGVLKLTIPRRDEARPRRIEVQTN
Specific function: Not known. This protein is one of the major immune reactive proteins in mycobacteria [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002068 - InterPro: IPR008978 [H]
Pfam domain/function: PF00011 HSP20 [H]
EC number: NA
Molecular weight: Translated: 15205; Mature: 15205
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRTQVAERDQQAVARREGDQPARRMTLTPAVDVFEDSQGITLWADLPGVTKDKLDVKV CCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEEE HDGNLYIEAEAVVPTPAGLRLQHAEIRESRFARAFSLSPDFDTSKIDANLQDGVLKLTIP ECCEEEEEEEEECCCCCCCEEEHHHHHHHHHHEEEECCCCCCCCEECCCCCCCEEEEEEC RRDEARPRRIEVQTN CCCCCCCEEEEEECC >Mature Secondary Structure MNDRTQVAERDQQAVARREGDQPARRMTLTPAVDVFEDSQGITLWADLPGVTKDKLDVKV CCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEEE HDGNLYIEAEAVVPTPAGLRLQHAEIRESRFARAFSLSPDFDTSKIDANLQDGVLKLTIP ECCEEEEEEEEECCCCCCCEEEHHHHHHHHHHEEEECCCCCCCCEECCCCCCCEEEEEEC RRDEARPRRIEVQTN CCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8454357 [H]