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The map label for this gene is ybbO [C]

Identifier: 91783106

GI number: 91783106

Start: 1956416

End: 1957378

Strand: Direct

Name: ybbO [C]

Synonym: Bxe_A2701

Alternate gene names: 91783106

Gene position: 1956416-1957378 (Clockwise)

Preceding gene: 91783096

Following gene: 91783108

Centisome position: 39.96

GC content: 58.26

Gene sequence:

>963_bases
ATGACCACCCAACAGCAACCCCTTATTTCCGGTTTCGGCGTCGAGACACAGCCAGAAGAGGTAATGGCCGGAATCGACCT
TCATGGAAAGGTCGCCATTGTCACTGGGGGCCACTCGGGCATCGGACTGGAAACAACTAAAGCCCTTGTGAAGGCGGGCG
CAAAAGTTGTTGTAGGGGCACGCGGCGTGGACAAGGCCATGGAATCGCTGGCTGGCCTCGAAAATGTCGATGTCGTGGAA
CTGAACCTCGCTGACCCGGACTCGGTGGACAATTTCGCGACCAGTTATCTGCGCACGCACAACAGCTGCGATATTCTCGT
CAACAATGCGGGTATCATGGCAACCCCGCTCACGCGCGATAGTCGTGGCTACGAGCTGCAGTTCGCAACCAACCATCTGG
GACACTTTCAGCTAACGGTGCAGCTATGGGATGCGCTTGCCGTGGCCGGGAGTGCCCGCGTGGTGGCGCTGTCGTCGCTT
GGCCATCGATTTTCGGCAATCAACTTTGATGACCTGAACTACCTTACCCGTCCGTATGATCCGTGGCGCGCTTATGGCCA
ATCCAAGACGGCCAACGCGTTGTTCGCAGTGCATCTCGACAGATTGGGGAAGGGGGCCGGAATTCGGGGTTTTGCCGTGC
ACCCCGGGAGAATCCCGACGACCAATCTCAGTCGTCACATGACGGACGAGGAGAAAAAGGCTGCGACTCAGGCTGTACAG
GTGGGACCCGACTATGTACCGTCCCCCCTTAAGAGTATCGCCCAAGGCGCCTCGACCAGTCTTTGGGCGGCGACCAGCGC
ACAGCTTTCTGGTAAGGGCGGCGTATATTGCGCGGATTGTGACATCTCCCCGATTGTTGCTGACGATAGTCCCGATGTGC
GTGGCGTGCGCCGTTGGGCGATTGATCCTGATCAGGCAGTGCGCCTTTGGGACGTTTCGCTTGATCTCGTCGCACGTCGA
TGA

Upstream 100 bases:

>100_bases
CGGATTGTGTTCAACATTCACGACATCACCAAAAAGCTTTGCTTTCATTCCGAAAAAGATATACAAATAGACGAAAAATG
TCTATTTTAAAAGGAGATTT

Downstream 100 bases:

>100_bases
AGCGAATGCAGCATCAGACAGAGCCATCTGGAAACGTGGATGTCAACGAGGCGTTGATTATGATGGTTCCTGCTGGCATC
ACGGTGCTTGAAGTAATGGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTTQQQPLISGFGVETQPEEVMAGIDLHGKVAIVTGGHSGIGLETTKALVKAGAKVVVGARGVDKAMESLAGLENVDVVE
LNLADPDSVDNFATSYLRTHNSCDILVNNAGIMATPLTRDSRGYELQFATNHLGHFQLTVQLWDALAVAGSARVVALSSL
GHRFSAINFDDLNYLTRPYDPWRAYGQSKTANALFAVHLDRLGKGAGIRGFAVHPGRIPTTNLSRHMTDEEKKAATQAVQ
VGPDYVPSPLKSIAQGASTSLWAATSAQLSGKGGVYCADCDISPIVADDSPDVRGVRRWAIDPDQAVRLWDVSLDLVARR

Sequences:

>Translated_320_residues
MTTQQQPLISGFGVETQPEEVMAGIDLHGKVAIVTGGHSGIGLETTKALVKAGAKVVVGARGVDKAMESLAGLENVDVVE
LNLADPDSVDNFATSYLRTHNSCDILVNNAGIMATPLTRDSRGYELQFATNHLGHFQLTVQLWDALAVAGSARVVALSSL
GHRFSAINFDDLNYLTRPYDPWRAYGQSKTANALFAVHLDRLGKGAGIRGFAVHPGRIPTTNLSRHMTDEEKKAATQAVQ
VGPDYVPSPLKSIAQGASTSLWAATSAQLSGKGGVYCADCDISPIVADDSPDVRGVRRWAIDPDQAVRLWDVSLDLVARR
>Mature_319_residues
TTQQQPLISGFGVETQPEEVMAGIDLHGKVAIVTGGHSGIGLETTKALVKAGAKVVVGARGVDKAMESLAGLENVDVVEL
NLADPDSVDNFATSYLRTHNSCDILVNNAGIMATPLTRDSRGYELQFATNHLGHFQLTVQLWDALAVAGSARVVALSSLG
HRFSAINFDDLNYLTRPYDPWRAYGQSKTANALFAVHLDRLGKGAGIRGFAVHPGRIPTTNLSRHMTDEEKKAATQAVQV
GPDYVPSPLKSIAQGASTSLWAATSAQLSGKGGVYCADCDISPIVADDSPDVRGVRRWAIDPDQAVRLWDVSLDLVARR

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI166795268, Length=299, Percent_Identity=34.1137123745819, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI10190746, Length=313, Percent_Identity=32.5878594249201, Blast_Score=148, Evalue=8e-36,
Organism=Homo sapiens, GI186928839, Length=303, Percent_Identity=35.6435643564356, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI7706523, Length=282, Percent_Identity=34.3971631205674, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI225579078, Length=204, Percent_Identity=39.2156862745098, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI193804850, Length=262, Percent_Identity=34.7328244274809, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI19923931, Length=152, Percent_Identity=43.421052631579, Blast_Score=114, Evalue=9e-26,
Organism=Homo sapiens, GI146231950, Length=309, Percent_Identity=30.42071197411, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI13375997, Length=190, Percent_Identity=28.4210526315789, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1786701, Length=236, Percent_Identity=30.0847457627119, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193207620, Length=324, Percent_Identity=30.5555555555556, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17532805, Length=324, Percent_Identity=30.5555555555556, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17532791, Length=281, Percent_Identity=29.8932384341637, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17558006, Length=280, Percent_Identity=31.0714285714286, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71992402, Length=289, Percent_Identity=27.681660899654, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17535059, Length=288, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505416, Length=298, Percent_Identity=27.8523489932886, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32565532, Length=229, Percent_Identity=29.2576419213974, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI72001364, Length=215, Percent_Identity=31.1627906976744, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6324820, Length=238, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=4e-20,
Organism=Drosophila melanogaster, GI22024069, Length=306, Percent_Identity=33.6601307189542, Blast_Score=141, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24586328, Length=291, Percent_Identity=34.7079037800687, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI28573296, Length=258, Percent_Identity=37.5968992248062, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI20129347, Length=275, Percent_Identity=32.3636363636364, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI45554248, Length=279, Percent_Identity=36.9175627240143, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24640117, Length=279, Percent_Identity=36.9175627240143, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI161076371, Length=261, Percent_Identity=35.2490421455939, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI19921754, Length=281, Percent_Identity=33.0960854092527, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24656154, Length=301, Percent_Identity=32.2259136212625, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI19922628, Length=301, Percent_Identity=32.2259136212625, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI45553409, Length=313, Percent_Identity=29.7124600638978, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24647948, Length=313, Percent_Identity=29.7124600638978, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24647946, Length=313, Percent_Identity=29.7124600638978, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24647931, Length=280, Percent_Identity=26.0714285714286, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358495, Length=206, Percent_Identity=29.6116504854369, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34157; Mature: 34026

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQQQPLISGFGVETQPEEVMAGIDLHGKVAIVTGGHSGIGLETTKALVKAGAKVVVGA
CCCCCCCCHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEC
RGVDKAMESLAGLENVDVVELNLADPDSVDNFATSYLRTHNSCDILVNNAGIMATPLTRD
CCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCCC
SRGYELQFATNHLGHFQLTVQLWDALAVAGSARVVALSSLGHRFSAINFDDLNYLTRPYD
CCCEEEEEECCCCCEEEEEEEHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHCCCCCC
PWRAYGQSKTANALFAVHLDRLGKGAGIRGFAVHPGRIPTTNLSRHMTDEEKKAATQAVQ
HHHHCCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHH
VGPDYVPSPLKSIAQGASTSLWAATSAQLSGKGGVYCADCDISPIVADDSPDVRGVRRWA
CCCCCCCHHHHHHHCCCCCEEEEEECCEECCCCCEEEECCCCCEEEECCCCCCCHHEEEC
IDPDQAVRLWDVSLDLVARR
CCHHHEEEEEECEEEEEECC
>Mature Secondary Structure 
TTQQQPLISGFGVETQPEEVMAGIDLHGKVAIVTGGHSGIGLETTKALVKAGAKVVVGA
CCCCCCCHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEC
RGVDKAMESLAGLENVDVVELNLADPDSVDNFATSYLRTHNSCDILVNNAGIMATPLTRD
CCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCCC
SRGYELQFATNHLGHFQLTVQLWDALAVAGSARVVALSSLGHRFSAINFDDLNYLTRPYD
CCCEEEEEECCCCCEEEEEEEHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHCCCCCC
PWRAYGQSKTANALFAVHLDRLGKGAGIRGFAVHPGRIPTTNLSRHMTDEEKKAATQAVQ
HHHHCCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHH
VGPDYVPSPLKSIAQGASTSLWAATSAQLSGKGGVYCADCDISPIVADDSPDVRGVRRWA
CCCCCCCHHHHHHHCCCCCEEEEEECCEECCCCCEEEECCCCCEEEECCCCCCCHHEEEC
IDPDQAVRLWDVSLDLVARR
CCHHHEEEEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383668 [H]