| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783016
Identifier: 91783016
GI number: 91783016
Start: 1857899
End: 1858753
Strand: Direct
Name: 91783016
Synonym: Bxe_A2793
Alternate gene names: NA
Gene position: 1857899-1858753 (Clockwise)
Preceding gene: 91783015
Following gene: 91783017
Centisome position: 37.95
GC content: 70.99
Gene sequence:
>855_bases ATGACTCACACTCTCCCGTTCGATTCCGTCAAACATGGCGCGCGCTGCGCCGCCGTGCTGGCCTTGCTGGCGCTGCTCGG CGCGTGCGCGTCCAGAGACCTGACGGGCTACGGCGTCGGCCCGCAGGCCGAGCGTGCCGTGCTGGCCCAGCAGGCCAACA AGGATCCCGCGCCGGACACGCCCGGCATGTACCTCGGCCTGATCGACCAGATGCAATCGCAAGGACTGTACTTCGCTTCG CTCGCGCATATCGATGCGTACGACAAGCAGTACGGCGCGAGCCCCGACTCGATCCTGCTGCGCGCCGACGCGCTGCGCAT GACCGGGCAGCCGGCCGCCGCCGCGGCCGCGTACGGAGAACTATTGAAGACGCCGCTCGCCACGCGCGGCTATCGCGGCC TCGGTCTGATCGCCGGCGCGGCCGGCGACTTCGCGCGTGCCGCGCAGGCGTTGCAGCAGGCCGCGCAGCTCGCGCCGACC GACGCGGCAACGCTGTCGGACCTCGGCTACGCAAGGCTGCGCGACGGCGACGTGGACGGCGCACGCGTGCCGCTCATGAA AGCGGCCGAACTCGACCAGAGCAATCCGAAGATCGTCAGCAACCTCGTGCTCTATCTGCTCGCGAGCGGCGACCAGGCGC AGGCGCTGGCGGTGATGAACCAGCAGAAGCTCGCACCGGACGTGCGCGCCGCGATTCGCAGCGATGCGGCGAAGGTGGCC GCGGCAGGACGTGCGCAGGCACACGGCGCGCCGGCGCAACAGCAATCGGGCGCGGGGGGCACGGGCACGCGCACGGTCGC GAGCGCGCAGGGCATCGAGCCCGCGCCGCGCCTGTTGCAGCGTTTCTCGCAATGA
Upstream 100 bases:
>100_bases GATCGTCACGTTGCTGCCCGCGTTGATGATCGTCACGGCCGGCCCCGGCGTGCTGGCTGTCCAGCATTCGCTGGGCGCGG CGAAGCACTGAGGATTTGCC
Downstream 100 bases:
>100_bases GCGCGCCGCGACTTCGGGCTGATGCATCAGGCAATCTTGGAGCAACGATGAAAAACAGAATCACGAAGCGGGGTTGGCGG GCGTCGATGCCGGCCCGGTG
Product: putative lipoprotein transmembrane
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTHTLPFDSVKHGARCAAVLALLALLGACASRDLTGYGVGPQAERAVLAQQANKDPAPDTPGMYLGLIDQMQSQGLYFAS LAHIDAYDKQYGASPDSILLRADALRMTGQPAAAAAAYGELLKTPLATRGYRGLGLIAGAAGDFARAAQALQQAAQLAPT DAATLSDLGYARLRDGDVDGARVPLMKAAELDQSNPKIVSNLVLYLLASGDQAQALAVMNQQKLAPDVRAAIRSDAAKVA AAGRAQAHGAPAQQQSGAGGTGTRTVASAQGIEPAPRLLQRFSQ
Sequences:
>Translated_284_residues MTHTLPFDSVKHGARCAAVLALLALLGACASRDLTGYGVGPQAERAVLAQQANKDPAPDTPGMYLGLIDQMQSQGLYFAS LAHIDAYDKQYGASPDSILLRADALRMTGQPAAAAAAYGELLKTPLATRGYRGLGLIAGAAGDFARAAQALQQAAQLAPT DAATLSDLGYARLRDGDVDGARVPLMKAAELDQSNPKIVSNLVLYLLASGDQAQALAVMNQQKLAPDVRAAIRSDAAKVA AAGRAQAHGAPAQQQSGAGGTGTRTVASAQGIEPAPRLLQRFSQ >Mature_283_residues THTLPFDSVKHGARCAAVLALLALLGACASRDLTGYGVGPQAERAVLAQQANKDPAPDTPGMYLGLIDQMQSQGLYFASL AHIDAYDKQYGASPDSILLRADALRMTGQPAAAAAAYGELLKTPLATRGYRGLGLIAGAAGDFARAAQALQQAAQLAPTD AATLSDLGYARLRDGDVDGARVPLMKAAELDQSNPKIVSNLVLYLLASGDQAQALAVMNQQKLAPDVRAAIRSDAAKVAA AGRAQAHGAPAQQQSGAGGTGTRTVASAQGIEPAPRLLQRFSQ
Specific function: Unknown
COG id: COG5010
COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 - InterPro: IPR016931 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29240; Mature: 29109
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTLPFDSVKHGARCAAVLALLALLGACASRDLTGYGVGPQAERAVLAQQANKDPAPDT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PGMYLGLIDQMQSQGLYFASLAHIDAYDKQYGASPDSILLRADALRMTGQPAAAAAAYGE CCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCHHHHHHHHH LLKTPLATRGYRGLGLIAGAAGDFARAAQALQQAAQLAPTDAATLSDLGYARLRDGDVDG HHHCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCC ARVPLMKAAELDQSNPKIVSNLVLYLLASGDQAQALAVMNQQKLAPDVRAAIRSDAAKVA CCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAGRAQAHGAPAQQQSGAGGTGTRTVASAQGIEPAPRLLQRFSQ HHCCHHCCCCCCHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure THTLPFDSVKHGARCAAVLALLALLGACASRDLTGYGVGPQAERAVLAQQANKDPAPDT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PGMYLGLIDQMQSQGLYFASLAHIDAYDKQYGASPDSILLRADALRMTGQPAAAAAAYGE CCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCHHHHHHHHH LLKTPLATRGYRGLGLIAGAAGDFARAAQALQQAAQLAPTDAATLSDLGYARLRDGDVDG HHHCCHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCC ARVPLMKAAELDQSNPKIVSNLVLYLLASGDQAQALAVMNQQKLAPDVRAAIRSDAAKVA CCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAGRAQAHGAPAQQQSGAGGTGTRTVASAQGIEPAPRLLQRFSQ HHCCHHCCCCCCHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]