| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783015
Identifier: 91783015
GI number: 91783015
Start: 1856876
End: 1857889
Strand: Direct
Name: 91783015
Synonym: Bxe_A2794
Alternate gene names: NA
Gene position: 1856876-1857889 (Clockwise)
Preceding gene: 91783014
Following gene: 91783016
Centisome position: 37.93
GC content: 68.64
Gene sequence:
>1014_bases ATGCAGACCCAACAACTCGTCGCGCTCGCGCTCGCTCTGGCCGCGCTCGGTTTGCTGCTGATCGCCGGACTGGTGCTGGC GCGCATGGCCGCCGCGCGGCGCAGCGAACGCACGCTGCGCCACGCGCTCGACGAGCGCGCGCTGCAAAGCGCGGCGCTCG CCGCCGCCGCGGCGGCACGCGGCGCAGAAGGCGCGCAGGGTGGCGCAAAGCGTGCCACGCGGCACGCACCGCCCACGGGT CTCAAAGGTCTGCTGGAGCGCTTCGCGCACACCGGGATTCGCTGGCTCGACACGCCGTTCGGCCGCCAGATCGTCGCCGA AGAAGATCGCCGGCTGCTCGAACAATGCGGTTTCGTGGATACGCGCACGCGCGGCCTCTTTCTGGTGGCGCGGCTCGCAG GTGCGATGGTGTTGCCCGTGCTGGCCGGCATGCTTACGCGCGGTCAGTTCGAGGGCTCGCGGTATGTGGCGCTGGTGATC ATCGCCGCGATGGCGGGCTTCATGCTGCCGAAATTCGTGCTGCGGCGGCGTGCCGGCAAGCGCCGCAACGGCGTGGTCGA CGAATTGCCGTTGCTGGTCGATCTGCTGCGGCTTCTGCAAGGCGTGGGTTTGTCGCTCGATCAGAGCTTGCAGGTGGTGG TCAACGACTTTCGCGGCATGCTGCCGGTGCTCGCCGGCGAGCTGGAAATCGCCCAGCGTCAGTTCACTGCCGGCCGCACG CGCGAGCAGTCGCTGAACCGGCTCGCAACGAGTTACGACAACGAGGATCTGCGCGCGGTTATGCGTTTGCTGGTGCAGGT GGACCGGCACGGCGGCGCCGTGCAGGAACCGCTCAAGCAGTTCGGCGACCGTCTGCGCGAAACGCGCCGCGCAATGTTGC GCGAACGCATTGGCCGGCTCGCCGTGAAGATGACGGGCGTGATGATCGTCACGTTGCTGCCCGCGTTGATGATCGTCACG GCCGGCCCCGGCGTGCTGGCTGTCCAGCATTCGCTGGGCGCGGCGAAGCACTGA
Upstream 100 bases:
>100_bases TGGTTCGATCCGACCGGCCGGCAACTCGTCTATCTGGCGTTTGCTTTGCAACTGGGTGGGGCATATCTGCTCTATCGCCT TGCGAACCTGAGGAATTGAC
Downstream 100 bases:
>100_bases GGATTTGCCATGACTCACACTCTCCCGTTCGATTCCGTCAAACATGGCGCGCGCTGCGCCGCCGTGCTGGCCTTGCTGGC GCTGCTCGGCGCGTGCGCGT
Product: putative tight adherence TadC related transmembrane protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadC; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F Subunit; Tight Adherence TadC-Like Transmembrane Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Type II Secretion System F Domain-Containing Protein; Type II/IV Secretion System Protein TadC Subfamily; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Type II Secretion System Protein Transmembrane; Putative Tight Adherence TadC-Like Transmembrane Protein; Transmembrane Type II Secretion Protein; Type II/IV Secretion System Membrane Protein
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MQTQQLVALALALAALGLLLIAGLVLARMAAARRSERTLRHALDERALQSAALAAAAAARGAEGAQGGAKRATRHAPPTG LKGLLERFAHTGIRWLDTPFGRQIVAEEDRRLLEQCGFVDTRTRGLFLVARLAGAMVLPVLAGMLTRGQFEGSRYVALVI IAAMAGFMLPKFVLRRRAGKRRNGVVDELPLLVDLLRLLQGVGLSLDQSLQVVVNDFRGMLPVLAGELEIAQRQFTAGRT REQSLNRLATSYDNEDLRAVMRLLVQVDRHGGAVQEPLKQFGDRLRETRRAMLRERIGRLAVKMTGVMIVTLLPALMIVT AGPGVLAVQHSLGAAKH
Sequences:
>Translated_337_residues MQTQQLVALALALAALGLLLIAGLVLARMAAARRSERTLRHALDERALQSAALAAAAAARGAEGAQGGAKRATRHAPPTG LKGLLERFAHTGIRWLDTPFGRQIVAEEDRRLLEQCGFVDTRTRGLFLVARLAGAMVLPVLAGMLTRGQFEGSRYVALVI IAAMAGFMLPKFVLRRRAGKRRNGVVDELPLLVDLLRLLQGVGLSLDQSLQVVVNDFRGMLPVLAGELEIAQRQFTAGRT REQSLNRLATSYDNEDLRAVMRLLVQVDRHGGAVQEPLKQFGDRLRETRRAMLRERIGRLAVKMTGVMIVTLLPALMIVT AGPGVLAVQHSLGAAKH >Mature_337_residues MQTQQLVALALALAALGLLLIAGLVLARMAAARRSERTLRHALDERALQSAALAAAAAARGAEGAQGGAKRATRHAPPTG LKGLLERFAHTGIRWLDTPFGRQIVAEEDRRLLEQCGFVDTRTRGLFLVARLAGAMVLPVLAGMLTRGQFEGSRYVALVI IAAMAGFMLPKFVLRRRAGKRRNGVVDELPLLVDLLRLLQGVGLSLDQSLQVVVNDFRGMLPVLAGELEIAQRQFTAGRT REQSLNRLATSYDNEDLRAVMRLLVQVDRHGGAVQEPLKQFGDRLRETRRAMLRERIGRLAVKMTGVMIVTLLPALMIVT AGPGVLAVQHSLGAAKH
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36583; Mature: 36583
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQQLVALALALAALGLLLIAGLVLARMAAARRSERTLRHALDERALQSAALAAAAAAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAEGAQGGAKRATRHAPPTGLKGLLERFAHTGIRWLDTPFGRQIVAEEDRRLLEQCGFVD CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCC TRTRGLFLVARLAGAMVLPVLAGMLTRGQFEGSRYVALVIIAAMAGFMLPKFVLRRRAGK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RRNGVVDELPLLVDLLRLLQGVGLSLDQSLQVVVNDFRGMLPVLAGELEIAQRQFTAGRT CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH REQSLNRLATSYDNEDLRAVMRLLVQVDRHGGAVQEPLKQFGDRLRETRRAMLRERIGRL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVKMTGVMIVTLLPALMIVTAGPGVLAVQHSLGAAKH HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure MQTQQLVALALALAALGLLLIAGLVLARMAAARRSERTLRHALDERALQSAALAAAAAAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAEGAQGGAKRATRHAPPTGLKGLLERFAHTGIRWLDTPFGRQIVAEEDRRLLEQCGFVD CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCC TRTRGLFLVARLAGAMVLPVLAGMLTRGQFEGSRYVALVIIAAMAGFMLPKFVLRRRAGK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RRNGVVDELPLLVDLLRLLQGVGLSLDQSLQVVVNDFRGMLPVLAGELEIAQRQFTAGRT CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH REQSLNRLATSYDNEDLRAVMRLLVQVDRHGGAVQEPLKQFGDRLRETRRAMLRERIGRL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVKMTGVMIVTLLPALMIVTAGPGVLAVQHSLGAAKH HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA