| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91783014
Identifier: 91783014
GI number: 91783014
Start: 1855795
End: 1856874
Strand: Direct
Name: 91783014
Synonym: Bxe_A2795
Alternate gene names: NA
Gene position: 1855795-1856874 (Clockwise)
Preceding gene: 91783013
Following gene: 91783015
Centisome position: 37.91
GC content: 67.22
Gene sequence:
>1080_bases ATGTCTAGCGCGGTTCTGGTCTTCGCGGCGCTTGCGCTGCTCTGCGCGGCGCTTGCATTGCTGCTCTGGCAGCGCAGCGC GCAACGCAAAGGCCAGGTGAGCGCGGAACGCTATATCGACAGCCGCGTGGCGTCTTCTGGTGGCGGCGCCTTTGGCGTTG CTTCCGCCATGCCGGCCGGCGCTGGCGTCGTCGGCGGCGGTGCGGGCAGCGTGGGCAGCGGCCCGGCAAGCGGCGCGCGC GCCACGCCCGCGCGCGCCGCCACGACGCACGCCGTGATTGCACCGCAGGCGCCGCCTGCGGATGCCGGCTGGCTCGCCTA TTGGCGTTATCTGCAGGCGCGCGCGCGCTTCATGGTGCGGCATGCGTTGGCGCGTGCGGGCATTGCCAATGCAAAAGGGC CCGCCGCGCTGGCGGGCACGCTGGTGTTGCTGCTGTGCGGCTGGGCCGCGCTGGTCGGCGGCGCGCTCGCGGCCGGCGTT GCGTTGTGCGCCTGCGTGATGTTCTTCTATTTTCTGCTGACGCTGCGCGTGAACAAACGCCGCCAGCAAATCGTGCGGCA GTTGCCGCTGTTTCTCGACGGCATCGTGCGTCTGATCACGCTCGGCAACAGCGTGCCCGCGGCCTTTCAGGCCGCGCTGC AAACGACCGAGGCGCCGTTGCGCGAATGCCTCGACTACGTGTCGCGGATGCTGCGCACCGGCGTCGAAATCGACCGTGCG CTTTCCCAGGTCGCGCTGATCTACGGCGTGCGCGAACTCGAACTGGTGGGCGCCGTGCTGCGCCTGTCGGTCAAATACGG CGGCCGCGCCGACGTGATGCTCGAACGGATGGCTTCGTTCATGCGCGACCTCGAACACGCCGAGCGCGAACTGGTGGCGA TGTCGGCGGAAACGCGGTTGTCGTCCTGGGTGCTGGCCATGCTGCCGGTGGGCATCGGCGGTTTTCTGATCCTCTCCAAT CCTAAGTATTTCGCTTCGATGTGGTTCGATCCGACCGGCCGGCAACTCGTCTATCTGGCGTTTGCTTTGCAACTGGGTGG GGCATATCTGCTCTATCGCCTTGCGAACCTGAGGAATTGA
Upstream 100 bases:
>100_bases GCGTTCGGCAATGCGGGTTTCGGCGGCGGTTTCGGTGGTTCGGGCGGTGGTGGCTTCGGCGGTTCGGGCGGTGGTGGCGG CGGGTTTGGCGGAGGCTTCA
Downstream 100 bases:
>100_bases CATGCAGACCCAACAACTCGTCGCGCTCGCGCTCGCTCTGGCCGCGCTCGGTTTGCTGCTGATCGCCGGACTGGTGCTGG CGCGCATGGCCGCCGCGCGG
Product: putative tight adherence TadB related transmembrane protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Type II Secretion System F Domain-Containing Protein; Tight Adherence TadB Related Transmembrane Protein; Flp Type Pilus Assembly Protein; Flp Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein Tadb; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Type IV Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSSAVLVFAALALLCAALALLLWQRSAQRKGQVSAERYIDSRVASSGGGAFGVASAMPAGAGVVGGGAGSVGSGPASGAR ATPARAATTHAVIAPQAPPADAGWLAYWRYLQARARFMVRHALARAGIANAKGPAALAGTLVLLLCGWAALVGGALAAGV ALCACVMFFYFLLTLRVNKRRQQIVRQLPLFLDGIVRLITLGNSVPAAFQAALQTTEAPLRECLDYVSRMLRTGVEIDRA LSQVALIYGVRELELVGAVLRLSVKYGGRADVMLERMASFMRDLEHAERELVAMSAETRLSSWVLAMLPVGIGGFLILSN PKYFASMWFDPTGRQLVYLAFALQLGGAYLLYRLANLRN
Sequences:
>Translated_359_residues MSSAVLVFAALALLCAALALLLWQRSAQRKGQVSAERYIDSRVASSGGGAFGVASAMPAGAGVVGGGAGSVGSGPASGAR ATPARAATTHAVIAPQAPPADAGWLAYWRYLQARARFMVRHALARAGIANAKGPAALAGTLVLLLCGWAALVGGALAAGV ALCACVMFFYFLLTLRVNKRRQQIVRQLPLFLDGIVRLITLGNSVPAAFQAALQTTEAPLRECLDYVSRMLRTGVEIDRA LSQVALIYGVRELELVGAVLRLSVKYGGRADVMLERMASFMRDLEHAERELVAMSAETRLSSWVLAMLPVGIGGFLILSN PKYFASMWFDPTGRQLVYLAFALQLGGAYLLYRLANLRN >Mature_358_residues SSAVLVFAALALLCAALALLLWQRSAQRKGQVSAERYIDSRVASSGGGAFGVASAMPAGAGVVGGGAGSVGSGPASGARA TPARAATTHAVIAPQAPPADAGWLAYWRYLQARARFMVRHALARAGIANAKGPAALAGTLVLLLCGWAALVGGALAAGVA LCACVMFFYFLLTLRVNKRRQQIVRQLPLFLDGIVRLITLGNSVPAAFQAALQTTEAPLRECLDYVSRMLRTGVEIDRAL SQVALIYGVRELELVGAVLRLSVKYGGRADVMLERMASFMRDLEHAERELVAMSAETRLSSWVLAMLPVGIGGFLILSNP KYFASMWFDPTGRQLVYLAFALQLGGAYLLYRLANLRN
Specific function: Unknown
COG id: COG4965
COG function: function code U; Flp pilus assembly protein TadB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38084; Mature: 37953
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAVLVFAALALLCAALALLLWQRSAQRKGQVSAERYIDSRVASSGGGAFGVASAMPAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCC AGVVGGGAGSVGSGPASGARATPARAATTHAVIAPQAPPADAGWLAYWRYLQARARFMVR CCEECCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH HALARAGIANAKGPAALAGTLVLLLCGWAALVGGALAAGVALCACVMFFYFLLTLRVNKR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQIVRQLPLFLDGIVRLITLGNSVPAAFQAALQTTEAPLRECLDYVSRMLRTGVEIDRA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LSQVALIYGVRELELVGAVLRLSVKYGGRADVMLERMASFMRDLEHAERELVAMSAETRL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSWVLAMLPVGIGGFLILSNPKYFASMWFDPTGRQLVYLAFALQLGGAYLLYRLANLRN HHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAVLVFAALALLCAALALLLWQRSAQRKGQVSAERYIDSRVASSGGGAFGVASAMPAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCC AGVVGGGAGSVGSGPASGARATPARAATTHAVIAPQAPPADAGWLAYWRYLQARARFMVR CCEECCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH HALARAGIANAKGPAALAGTLVLLLCGWAALVGGALAAGVALCACVMFFYFLLTLRVNKR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQIVRQLPLFLDGIVRLITLGNSVPAAFQAALQTTEAPLRECLDYVSRMLRTGVEIDRA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LSQVALIYGVRELELVGAVLRLSVKYGGRADVMLERMASFMRDLEHAERELVAMSAETRL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSWVLAMLPVGIGGFLILSNPKYFASMWFDPTGRQLVYLAFALQLGGAYLLYRLANLRN HHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA