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The map label for this gene is hofB [C]

Identifier: 91783013

GI number: 91783013

Start: 1854393

End: 1855802

Strand: Direct

Name: hofB [C]

Synonym: Bxe_A2796

Alternate gene names: 91783013

Gene position: 1854393-1855802 (Clockwise)

Preceding gene: 91783012

Following gene: 91783014

Centisome position: 37.88

GC content: 64.68

Gene sequence:

>1410_bases
ATGGCAAAAGACATCGAATTTGCCGACGACGCGCCTTCGTTCGCGCATAGCCAGCAGTTCCAGGATATCAAGAACGCTGC
GCACGAACATCTGCTCACGCGTATCGAAGAACTCGGCTCCGAGTTCGGCCGCTGGTCGCGTAACGCGATCAACCAGTTCG
TCGATCTGGAGATGGACAGCTTCGTCAGGCTGCGCCGGATACCGATCAACGAGAGCGAGGTGCGCCTGATCGCCGAGGCG
CTGACCAAGGAGCTCGCGGGCTTCGGTCCGATCGAGGATCTGCTCGCCGATCCGGCCGTCGAAGATATTCTGATCAACGG
CTACAACGACGTGTACGTGTCGCGCCACGGCATTCTGACGCGCATTCAGGTGCGCTTTGCCGACAACGCGCATCTGCTGC
GGATCGTGCGGCGCATTCTCGCGCCGATCGGCCGGCGTCTGGACGAATCGAACCCGATGGTCGATGCGCGTCTGCCGAAC
GGCGGCCGCGTGAACGTGGTGATCGAGCCGCTCTCGATCGACGGGCCGATCGTCTCGATCCGCAAATTCCGCAAAGATCC
GATGCGGCCCGACGATCTGCTCGGCAACGGCACCTACAGCCCGGAAATCGGCGCGTTGCTCGAAGCCGCGGTGGCGGCGC
GCTGCAACGTGCTGGTGTCGGGCGGCACGAGTTCGGGCAAGACCTCGCTTCTCAATGCGCTGGCGTTTCACATTCCCGAG
GCGGAACGCGTCGTGACCATCGAGGACACGGCGGAGCTTTCGCTGAACCATCCGCACGTGGTGCGGCTGGAAAGCCGGCC
GGGCGGCTTCGACGGCGCGGGCGTCGTGACGATTCGCGACCTGCTGCGCAATACCTTGCGGATGCGGCCGGACCGCATCA
TCGTCGGCGAAGTGCGCGGCGGCGAGGTGCTCGAAATGCTGCAGGCGATGAACACCGGCCACGACGGTTCGATGGGCACC
GTGCACGCCAGCTCGCCGCGCGAATGTCTGTACCGGCTCGAAATGCTGGCGGGCTTCGCGGGCTTTCAGGGCACCGAGTC
GAGCCTGCGCCGCCAGATCGCCAATGCGATCGACTTCATCGTGCAGATTGGCCGGCTCTCCAACGGGCGCCGGCGCATTC
TGTCGATCACGGAAGTGACGGGGCTGTCGGACAACATCATCGCCACTCAGGAGTTGTATCGCTACGAGCCGATCCTGAAT
GCCGATGGCGACGAACTCGACAACTGGGTTTCGCTCGGCATTCATCCGCACTCGCCGAAGCTGGCGCGCTTCCGCCAGGC
GCTCGGCGGCGGGGCCGGCAATGCGTTCGGCAATGCGGGTTTCGGCGGCGGTTTCGGTGGTTCGGGCGGTGGTGGCTTCG
GCGGTTCGGGCGGTGGTGGCGGCGGGTTTGGCGGAGGCTTCAATGTCTAG

Upstream 100 bases:

>100_bases
GCTCGGCGGCGCGCAGCGCGCCGTGGCGCAGGCACGCGGCAAGGCGGCATTCGGCGCGCTCAGGCGCCTCATTCCAACCA
CTCACAAGCGGTCATAGACG

Downstream 100 bases:

>100_bases
CGCGGTTCTGGTCTTCGCGGCGCTTGCGCTGCTCTGCGCGGCGCTTGCATTGCTGCTCTGGCAGCGCAGCGCGCAACGCA
AAGGCCAGGTGAGCGCGGAA

Product: putative type II/IV secretion ATPase protein, TadA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MAKDIEFADDAPSFAHSQQFQDIKNAAHEHLLTRIEELGSEFGRWSRNAINQFVDLEMDSFVRLRRIPINESEVRLIAEA
LTKELAGFGPIEDLLADPAVEDILINGYNDVYVSRHGILTRIQVRFADNAHLLRIVRRILAPIGRRLDESNPMVDARLPN
GGRVNVVIEPLSIDGPIVSIRKFRKDPMRPDDLLGNGTYSPEIGALLEAAVAARCNVLVSGGTSSGKTSLLNALAFHIPE
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGAGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEPILN
ADGDELDNWVSLGIHPHSPKLARFRQALGGGAGNAFGNAGFGGGFGGSGGGGFGGSGGGGGGFGGGFNV

Sequences:

>Translated_469_residues
MAKDIEFADDAPSFAHSQQFQDIKNAAHEHLLTRIEELGSEFGRWSRNAINQFVDLEMDSFVRLRRIPINESEVRLIAEA
LTKELAGFGPIEDLLADPAVEDILINGYNDVYVSRHGILTRIQVRFADNAHLLRIVRRILAPIGRRLDESNPMVDARLPN
GGRVNVVIEPLSIDGPIVSIRKFRKDPMRPDDLLGNGTYSPEIGALLEAAVAARCNVLVSGGTSSGKTSLLNALAFHIPE
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGAGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEPILN
ADGDELDNWVSLGIHPHSPKLARFRQALGGGAGNAFGNAGFGGGFGGSGGGGFGGSGGGGGGFGGGFNV
>Mature_468_residues
AKDIEFADDAPSFAHSQQFQDIKNAAHEHLLTRIEELGSEFGRWSRNAINQFVDLEMDSFVRLRRIPINESEVRLIAEAL
TKELAGFGPIEDLLADPAVEDILINGYNDVYVSRHGILTRIQVRFADNAHLLRIVRRILAPIGRRLDESNPMVDARLPNG
GRVNVVIEPLSIDGPIVSIRKFRKDPMRPDDLLGNGTYSPEIGALLEAAVAARCNVLVSGGTSSGKTSLLNALAFHIPEA
ERVVTIEDTAELSLNHPHVVRLESRPGGFDGAGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGTV
HASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEPILNA
DGDELDNWVSLGIHPHSPKLARFRQALGGGAGNAFGNAGFGGGFGGSGGGGFGGSGGGGGGFGGGFNV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 50586; Mature: 50455

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDIEFADDAPSFAHSQQFQDIKNAAHEHLLTRIEELGSEFGRWSRNAINQFVDLEMDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FVRLRRIPINESEVRLIAEALTKELAGFGPIEDLLADPAVEDILINGYNDVYVSRHGILT
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHEECCCCEEEEECCCCEE
RIQVRFADNAHLLRIVRRILAPIGRRLDESNPMVDARLPNGGRVNVVIEPLSIDGPIVSI
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHH
RKFRKDPMRPDDLLGNGTYSPEIGALLEAAVAARCNVLVSGGTSSGKTSLLNALAFHIPE
HHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCC
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGAGVVTIRDLLRNTLRMRPDRIIVGEVRG
CCEEEEEECCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEPILNADGDELDNWVSLGIHPHSPK
HHHHHCCCCCHHEEEEEHHCCCCCCCCHHHHHHHHCCCCCCCCHHHCHHEEECCCCCCCH
LARFRQALGGGAGNAFGNAGFGGGFGGSGGGGFGGSGGGGGGFGGGFNV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKDIEFADDAPSFAHSQQFQDIKNAAHEHLLTRIEELGSEFGRWSRNAINQFVDLEMDS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FVRLRRIPINESEVRLIAEALTKELAGFGPIEDLLADPAVEDILINGYNDVYVSRHGILT
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHEECCCCEEEEECCCCEE
RIQVRFADNAHLLRIVRRILAPIGRRLDESNPMVDARLPNGGRVNVVIEPLSIDGPIVSI
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHH
RKFRKDPMRPDDLLGNGTYSPEIGALLEAAVAARCNVLVSGGTSSGKTSLLNALAFHIPE
HHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCC
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGAGVVTIRDLLRNTLRMRPDRIIVGEVRG
CCEEEEEECCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEPILNADGDELDNWVSLGIHPHSPK
HHHHHCCCCCHHEEEEEHHCCCCCCCCHHHHHHHHCCCCCCCCHHHCHHEEECCCCCCCH
LARFRQALGGGAGNAFGNAGFGGGFGGSGGGGFGGSGGGGGGFGGGFNV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]