| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is dhmA [H]
Identifier: 91782890
GI number: 91782890
Start: 1683618
End: 1684751
Strand: Direct
Name: dhmA [H]
Synonym: Bxe_A2933
Alternate gene names: 91782890
Gene position: 1683618-1684751 (Clockwise)
Preceding gene: 91782884
Following gene: 91782892
Centisome position: 34.39
GC content: 64.29
Gene sequence:
>1134_bases ATGAGTTTTCGCCGACTTTCTTTGCTCGCCATGTCGGGCGCTTGCGTGGTGGCCGCCGCCTGTGCGCCGGCTGTGTTTGC TGCTTCGGCTGCCGCGCCGGCGAACGCCGCCACGGCCAGCGAGGCCGGTGTGACCGGCCTGGCCTCTTTGCCCGCCTCGG CTGCGACCCGTGCCGTTGGCGAGGCCGGTCCGGCCTACGGTCCCGAGTTGCAGGGCTTCGACTATCCGGCGCCGCTCGGG CAGTACGATTTCACCTCTCAAGGGGTGGCGCTGCATATGGCGTACATGGACATCAAGCCGGCGCATGCGAATGGCCGCAC AGCGGTGTTGCTGCACGGCAAGAACTTCTGCGCGGCAACGTGGGAGACCACCATTCATCAGCTGAGCGAGGCGGGCTATC GCGTGATCGCGCCCGACCAGATCGGCTTTTGCAAATCGAGCAAGCCCGAGCACTATCAGTACAGCTTTCAACAGCTGGCG CGCAATACGCACGCGCTGCTGCAATCGCTCGGCGTGACCGACGCGACCGTGATCGGCCACTCCACGGGCGGCATGCTGGC GATCCGTTACGCGCTGATGTATCCGCACGAGACGCAGCAACTGGTGCTGGTCAACCCGATCGGTCTGGAGGACTGGAAGG CGAAGGGCGTGCCCTCGCTTTCCGTGGACCAGTGGTATGAGCGCGAACTGAAGACGACCGCCGACGGTATTCGTCGCTAC GAGCAGTCCACCTATTACGCGGGGCAGTGGCGTGCGGATTACGAACCGTGGGTGCAGATGCTGGCGGGCATGTACCGCGG TCCGGGCAAACAGATCGTCGCGTGGAATTCGGCGCTGCTGTACGACATGATCTACACGCAGCCGGTTGTTTATGAACTCG GTCAACTGAGCATGCCGACGCTGCTGCTGATCGGCCAGAAGGACACCACCGCGATCGGCAAGGATGCGGCGCCGCCGGAG GTGCGCGCCAAGATCGGGCATTATCCGGAGTTGGGTCGCGCGGCCGCGAAGGCGATTCCGCATGCGACGCTGGTCGAGTT TGCCGACCTGGGACATGCGCCGCAGATGCAGGATCCGCAGGCGTTTCATAAGGCGCTGCTGGAAGGACTGGCGATGATAC CGGCGAATCGGTGA
Upstream 100 bases:
>100_bases CGTAGAATCGTCGGCTCCCGGCCGGAGGTTCGGGCGCCGGCCTGGCCGTGCGTTTGGCCTCGCATGGCTCCCCCGTGTTC TGCCTTGATAAAAAACCTCG
Downstream 100 bases:
>100_bases TGCGATAAACGGCTGAGCTCTCCGAACGACAAAAGGGGCGGCTCAGCGGCCGTCCCTTTCCACATTCGTCAACGCGCTTA ACAACCCGCCGCCAACTCCT
Product: alpha/beta family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSFRRLSLLAMSGACVVAAACAPAVFAASAAAPANAATASEAGVTGLASLPASAATRAVGEAGPAYGPELQGFDYPAPLG QYDFTSQGVALHMAYMDIKPAHANGRTAVLLHGKNFCAATWETTIHQLSEAGYRVIAPDQIGFCKSSKPEHYQYSFQQLA RNTHALLQSLGVTDATVIGHSTGGMLAIRYALMYPHETQQLVLVNPIGLEDWKAKGVPSLSVDQWYERELKTTADGIRRY EQSTYYAGQWRADYEPWVQMLAGMYRGPGKQIVAWNSALLYDMIYTQPVVYELGQLSMPTLLLIGQKDTTAIGKDAAPPE VRAKIGHYPELGRAAAKAIPHATLVEFADLGHAPQMQDPQAFHKALLEGLAMIPANR
Sequences:
>Translated_377_residues MSFRRLSLLAMSGACVVAAACAPAVFAASAAAPANAATASEAGVTGLASLPASAATRAVGEAGPAYGPELQGFDYPAPLG QYDFTSQGVALHMAYMDIKPAHANGRTAVLLHGKNFCAATWETTIHQLSEAGYRVIAPDQIGFCKSSKPEHYQYSFQQLA RNTHALLQSLGVTDATVIGHSTGGMLAIRYALMYPHETQQLVLVNPIGLEDWKAKGVPSLSVDQWYERELKTTADGIRRY EQSTYYAGQWRADYEPWVQMLAGMYRGPGKQIVAWNSALLYDMIYTQPVVYELGQLSMPTLLLIGQKDTTAIGKDAAPPE VRAKIGHYPELGRAAAKAIPHATLVEFADLGHAPQMQDPQAFHKALLEGLAMIPANR >Mature_376_residues SFRRLSLLAMSGACVVAAACAPAVFAASAAAPANAATASEAGVTGLASLPASAATRAVGEAGPAYGPELQGFDYPAPLGQ YDFTSQGVALHMAYMDIKPAHANGRTAVLLHGKNFCAATWETTIHQLSEAGYRVIAPDQIGFCKSSKPEHYQYSFQQLAR NTHALLQSLGVTDATVIGHSTGGMLAIRYALMYPHETQQLVLVNPIGLEDWKAKGVPSLSVDQWYERELKTTADGIRRYE QSTYYAGQWRADYEPWVQMLAGMYRGPGKQIVAWNSALLYDMIYTQPVVYELGQLSMPTLLLIGQKDTTAIGKDAAPPEV RAKIGHYPELGRAAAKAIPHATLVEFADLGHAPQMQDPQAFHKALLEGLAMIPANR
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity, which includes mono- and di- chlorinated
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 40593; Mature: 40462
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRRLSLLAMSGACVVAAACAPAVFAASAAAPANAATASEAGVTGLASLPASAATRAVG CCCHHEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHH EAGPAYGPELQGFDYPAPLGQYDFTSQGVALHMAYMDIKPAHANGRTAVLLHGKNFCAAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEEHH WETTIHQLSEAGYRVIAPDQIGFCKSSKPEHYQYSFQQLARNTHALLQSLGVTDATVIGH HHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC STGGMLAIRYALMYPHETQQLVLVNPIGLEDWKAKGVPSLSVDQWYERELKTTADGIRRY CCCCCEEEHHHHHCCCCCCEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH EQSTYYAGQWRADYEPWVQMLAGMYRGPGKQIVAWNSALLYDMIYTQPVVYELGQLSMPT HHCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHCCCCCCE LLLIGQKDTTAIGKDAAPPEVRAKIGHYPELGRAAAKAIPHATLVEFADLGHAPQMQDPQ EEEECCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHH AFHKALLEGLAMIPANR HHHHHHHHHHHHCCCCC >Mature Secondary Structure SFRRLSLLAMSGACVVAAACAPAVFAASAAAPANAATASEAGVTGLASLPASAATRAVG CCHHEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHH EAGPAYGPELQGFDYPAPLGQYDFTSQGVALHMAYMDIKPAHANGRTAVLLHGKNFCAAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEEHH WETTIHQLSEAGYRVIAPDQIGFCKSSKPEHYQYSFQQLARNTHALLQSLGVTDATVIGH HHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC STGGMLAIRYALMYPHETQQLVLVNPIGLEDWKAKGVPSLSVDQWYERELKTTADGIRRY CCCCCEEEHHHHHCCCCCCEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH EQSTYYAGQWRADYEPWVQMLAGMYRGPGKQIVAWNSALLYDMIYTQPVVYELGQLSMPT HHCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHCCCCCCE LLLIGQKDTTAIGKDAAPPEVRAKIGHYPELGRAAAKAIPHATLVEFADLGHAPQMQDPQ EEEECCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHH AFHKALLEGLAMIPANR HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12147465 [H]