| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782856
Identifier: 91782856
GI number: 91782856
Start: 1640306
End: 1641679
Strand: Direct
Name: 91782856
Synonym: Bxe_A2969
Alternate gene names: NA
Gene position: 1640306-1641679 (Clockwise)
Preceding gene: 91782855
Following gene: 91782857
Centisome position: 33.5
GC content: 60.99
Gene sequence:
>1374_bases ATGGCGGGTATCGGCTTCGAATTGCGCAAGATCATGCGCCGCGACACGCTGACCGGCGTGGCGCGCGCCTACGCCTACGC GGGCCTGATCAGCTCCGGTCCGCTGATCCTGTCGATCTTCGGTATCCTGATCATCGGGCTGATCAGTCTCACCTCGGTGA TCCCGACTTTCGCGATCGTGCAGTTTCAGGTGTCGGTCACCTATCTGATCGCGCTCAGTCTGATTCTCACCGGGCCGCTG CAACTGTCGTTCACGCGTTTCATTTCCGACCGCCTGTTCGAAAAGCGCGACGACCTCGTGCTGTCGAACTACAACGGCGT GGTGCTGGTGTCGACGATTCTCGCCGGCGTGGTCGCGGTAATCGCGATGCTGGTGGGTTTCCGCGAGGAACCGCTGATCT ATCGCCTGCTGATGATTACGGGCTTCGTCGTGGTCAGCAACATCTGGATCGCCGTGATTTTTCTGTCGAGCGTGAAGCAG TATCGGCAAATCCTGCTGGTGTTCGCCGTGGGCTATGCGTGCGTGGTGTGCCTCGCGCTCGCGTTGAATGGTTATGGACT TGTCGGATTGCTCGGCGGGTTCGTGGCGGGGCACATCGTGCTGCTCGCCGGCCTGTCGGGGCTGATCTACCGTAACTACC GCAGCGAGCGTTTCGTTTCGTTCGAAGTGTTCGAGCGGCGCTTCGCCTATCCGAGCCTCGCGCTGGTCGGCCTGTTGTTC AACATCGGCGTGTGGCTCGACAAGTTCATGTTCTGGTATGCGCCGGGTACGGGCACCCGGGTTATCGGGCCGCTGCACGC GTCGGTGATTTACGACATTCCGATTTTTATCGCCTACGTGTGCGTGATGCCCGGCATGGCGACCTTCCTCGTGCGCATCG AGGCGGACTTCGTCGAGTACTACGACGCCTTTTACGACGCCGTGCGCAGCGGCGCGACGCTGCGCCATATCAACGAAATG CGCGACATGATGGTGGGCAGCGTGCGGGCCGGTCTGTACGAAATCATCAAGGTGCAGGCGGTCGTGCTGCTGCTGATCAT CGCCTTCGGCGAGCGCGTGCTGGGCTCGCTGGGCATTTCGCCGCTGTATATGCCGCTGCTGGTGGTGGACGTGGTGTCGG CGAGTCTGCAGGTGCTGCTGCTCGGGCTGCTCAACGTGTTCTTCTATCTCGACGGGCGGCGCGTCGTGCTGCGGCTCACC GGCGCCTTCGTGGTGCTGAACGGAGTGTTCACGGGCATCACGCTCAGGCTCGGACCGGATTTCTACGGCTATGGATTTGC GCTGGCGCTGCTGGTCGTGGTGGTGGCCGCAGTGAAAGTGCTCGACCGCAAATTCATGTCTTTGGAATACGAAACGTATA TGTTGCGGGGTTGA
Upstream 100 bases:
>100_bases CCACCGACGCGGCGCGCTGCCCGATGCATCACGGCACTCAATCCAGGGCAGAGCCGCGTGTGCAGCCGGCGCAGTCCGTT CAATCGCAGGAGACACGCTG
Downstream 100 bases:
>100_bases AGCGGAGGCGCCGCTGTTTTCGACCCGGCCGCGTGGCCAGGCCTGCCGTTCTGAAACGGCGGCGCCTCGCGCGTGGCGAG CCGGACCGGCGCGCCCGCAC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Inner Membrane Protein; Polysaccharide Synthase Transmembrane Protein; Transmembrane Protein Cog
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MAGIGFELRKIMRRDTLTGVARAYAYAGLISSGPLILSIFGILIIGLISLTSVIPTFAIVQFQVSVTYLIALSLILTGPL QLSFTRFISDRLFEKRDDLVLSNYNGVVLVSTILAGVVAVIAMLVGFREEPLIYRLLMITGFVVVSNIWIAVIFLSSVKQ YRQILLVFAVGYACVVCLALALNGYGLVGLLGGFVAGHIVLLAGLSGLIYRNYRSERFVSFEVFERRFAYPSLALVGLLF NIGVWLDKFMFWYAPGTGTRVIGPLHASVIYDIPIFIAYVCVMPGMATFLVRIEADFVEYYDAFYDAVRSGATLRHINEM RDMMVGSVRAGLYEIIKVQAVVLLLIIAFGERVLGSLGISPLYMPLLVVDVVSASLQVLLLGLLNVFFYLDGRRVVLRLT GAFVVLNGVFTGITLRLGPDFYGYGFALALLVVVVAAVKVLDRKFMSLEYETYMLRG
Sequences:
>Translated_457_residues MAGIGFELRKIMRRDTLTGVARAYAYAGLISSGPLILSIFGILIIGLISLTSVIPTFAIVQFQVSVTYLIALSLILTGPL QLSFTRFISDRLFEKRDDLVLSNYNGVVLVSTILAGVVAVIAMLVGFREEPLIYRLLMITGFVVVSNIWIAVIFLSSVKQ YRQILLVFAVGYACVVCLALALNGYGLVGLLGGFVAGHIVLLAGLSGLIYRNYRSERFVSFEVFERRFAYPSLALVGLLF NIGVWLDKFMFWYAPGTGTRVIGPLHASVIYDIPIFIAYVCVMPGMATFLVRIEADFVEYYDAFYDAVRSGATLRHINEM RDMMVGSVRAGLYEIIKVQAVVLLLIIAFGERVLGSLGISPLYMPLLVVDVVSASLQVLLLGLLNVFFYLDGRRVVLRLT GAFVVLNGVFTGITLRLGPDFYGYGFALALLVVVVAAVKVLDRKFMSLEYETYMLRG >Mature_456_residues AGIGFELRKIMRRDTLTGVARAYAYAGLISSGPLILSIFGILIIGLISLTSVIPTFAIVQFQVSVTYLIALSLILTGPLQ LSFTRFISDRLFEKRDDLVLSNYNGVVLVSTILAGVVAVIAMLVGFREEPLIYRLLMITGFVVVSNIWIAVIFLSSVKQY RQILLVFAVGYACVVCLALALNGYGLVGLLGGFVAGHIVLLAGLSGLIYRNYRSERFVSFEVFERRFAYPSLALVGLLFN IGVWLDKFMFWYAPGTGTRVIGPLHASVIYDIPIFIAYVCVMPGMATFLVRIEADFVEYYDAFYDAVRSGATLRHINEMR DMMVGSVRAGLYEIIKVQAVVLLLIIAFGERVLGSLGISPLYMPLLVVDVVSASLQVLLLGLLNVFFYLDGRRVVLRLTG AFVVLNGVFTGITLRLGPDFYGYGFALALLVVVVAAVKVLDRKFMSLEYETYMLRG
Specific function: Unknown
COG id: COG4267
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50382; Mature: 50251
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIGFELRKIMRRDTLTGVARAYAYAGLISSGPLILSIFGILIIGLISLTSVIPTFAIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QFQVSVTYLIALSLILTGPLQLSFTRFISDRLFEKRDDLVLSNYNGVVLVSTILAGVVAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH IAMLVGFREEPLIYRLLMITGFVVVSNIWIAVIFLSSVKQYRQILLVFAVGYACVVCLAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALNGYGLVGLLGGFVAGHIVLLAGLSGLIYRNYRSERFVSFEVFERRFAYPSLALVGLLF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHH NIGVWLDKFMFWYAPGTGTRVIGPLHASVIYDIPIFIAYVCVMPGMATFLVRIEADFVEY HHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH YDAFYDAVRSGATLRHINEMRDMMVGSVRAGLYEIIKVQAVVLLLIIAFGERVLGSLGIS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLYMPLLVVDVVSASLQVLLLGLLNVFFYLDGRRVVLRLTGAFVVLNGVFTGITLRLGPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCEEEEECCC FYGYGFALALLVVVVAAVKVLDRKFMSLEYETYMLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure AGIGFELRKIMRRDTLTGVARAYAYAGLISSGPLILSIFGILIIGLISLTSVIPTFAIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QFQVSVTYLIALSLILTGPLQLSFTRFISDRLFEKRDDLVLSNYNGVVLVSTILAGVVAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH IAMLVGFREEPLIYRLLMITGFVVVSNIWIAVIFLSSVKQYRQILLVFAVGYACVVCLAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALNGYGLVGLLGGFVAGHIVLLAGLSGLIYRNYRSERFVSFEVFERRFAYPSLALVGLLF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHH NIGVWLDKFMFWYAPGTGTRVIGPLHASVIYDIPIFIAYVCVMPGMATFLVRIEADFVEY HHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH YDAFYDAVRSGATLRHINEMRDMMVGSVRAGLYEIIKVQAVVLLLIIAFGERVLGSLGIS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLYMPLLVVDVVSASLQVLLLGLLNVFFYLDGRRVVLRLTGAFVVLNGVFTGITLRLGPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCEEEEECCC FYGYGFALALLVVVVAAVKVLDRKFMSLEYETYMLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA