| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782769
Identifier: 91782769
GI number: 91782769
Start: 1533779
End: 1535275
Strand: Direct
Name: 91782769
Synonym: Bxe_A3056
Alternate gene names: NA
Gene position: 1533779-1535275 (Clockwise)
Preceding gene: 91782768
Following gene: 91782770
Centisome position: 31.33
GC content: 60.92
Gene sequence:
>1497_bases GTGAGCGTTCCGTTCAAGAATATTCCTGCTGGCGATCAGATCCGCGTGCCGCTGTTTTACGCGGAGGTCGACAACAGCCA GGCCAATACCGCGACGCAGTCCCAGCGCGCGCTGATCATTGGCCAGATCACGGCCTCGGGTACCGGTACCCCCAATACGC CGACGATCTGCCAGGGCAAATCGGATGCGAAGACCGTCGGCGGCCCGGGCTCCATGCTCGCGCTGATGACTGCTGCGTAT CGAGATAGCGATGACTTCGGAGAGGTCTGGTACTTGCCGCTCGCGGATGATGGCAGCGCAGTGGCCGCAACGGGTTCGAT CAATTTCACGGCGGCCGCGACGGCCGTAGGTGTGCTCTTCCTGTATCTCGCAGGTCAGCTGGTCACGCAGACGGTGAATG CTTCGCTTACCGCTGCGCAACTCGCAACGGCGCTGGTGGCGACAGTCAATGCCGCGACCGATCTGCCGGTAACAGCGGCC GTCGACGGCACGACCACGAGCAAGGTGAACTTTACGGCGAAGAACAAAGGCCTCGCCGGCAACGATATCGACATCAGCGT GAATTATCGCGGCACGGCCAATGGGGAAGTGACGCCGGCCGGCCTCACGTTCGCTATCACGGCAATGAGTGGGGGCCTGG TGAACCCTTCGCTGACGGCGGGTCTCGCCAACCTCGCAGATATGCCGTTCGACTTCATCGTCATGCCCTACACGGATGCG ACGTCACTCGATGCGGTCAAGTCTTTCCTCAACGACCAGAACGGGCGATGGGCATGGTCGAAAGGCATCTATGGGCATTT CTTTGCGATGTATCGCGGTACGGTCGGTGCTCTGACCACGTTCGGCGTGACGCGCAATGATCAGCATGGCAGTGTGATGG GCTTCAATGGTTCGCCGACGCCGGCGTGGGTGGGTGCGGCCGATTTGTGTGGCGCTGTCGCCGTCTCGCTGCGTGCAGAT CCGGGGCTCCCGCTTCAGACCGTCGCTCTCTCGACATTCCTTGCCCCGCCGGTCGCATCGCGCTTTGCGCTACCGGATCG CAATACGCTGCTGTTCGACGGTATTTCCACCTTCACCGTCGCCGACGACGGAACGGTCGCGATCGAAAATCTGATCACCA CGTACCAGAAGAACGGCTTCGGACAGCCCGACAACAGCTATTTGCAGGTCGAGACGCTATTCCTGCTGATGTATGTGATC CGACGGCTGAAAGGCGTCGTCACCAGCAAATATGGCCGCAAGAAACTGGCAGCGAACGGCACGCGCTTCGCACCGGGCGC GAACATCGTCACGCCCAACATCATCCGGGCCGATCAGATCGCTGAGTATCAGGCGATGGAATTCGAGGGATATGTCCAGA ACAGTGATGCGTTTGCCGCGGGCCTGATCGTCGAGCAGGACGCCCAGAACCCGAGCCGCATTAACGAGCTGTGGGACGGC GTTCTCATCGACGGACTGCGAATCTTCGCGCTGCTTGCCCAGTTCCGCCTCAGTTGA
Upstream 100 bases:
>100_bases ATTGGCACCGCCGCCTGCGCGATGGTGACGTCGTCCTCGTTGAAAAATCGAATGCGTCGGCGGTTGCACAGCCCGCGCGT AACATCGGGAGCGAACAATC
Downstream 100 bases:
>100_bases TATGGAGTTGAAGTTTTGCCCGGGCTGCTGCACCGAGAAGGCAGCAACCTCAGAAAATTTCAGTCGTAATCGGCGAACGC GCGACGGACTTGCTTGTTAC
Product: putative bacteriophage tail sheath protein GpL, Mu-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MSVPFKNIPAGDQIRVPLFYAEVDNSQANTATQSQRALIIGQITASGTGTPNTPTICQGKSDAKTVGGPGSMLALMTAAY RDSDDFGEVWYLPLADDGSAVAATGSINFTAAATAVGVLFLYLAGQLVTQTVNASLTAAQLATALVATVNAATDLPVTAA VDGTTTSKVNFTAKNKGLAGNDIDISVNYRGTANGEVTPAGLTFAITAMSGGLVNPSLTAGLANLADMPFDFIVMPYTDA TSLDAVKSFLNDQNGRWAWSKGIYGHFFAMYRGTVGALTTFGVTRNDQHGSVMGFNGSPTPAWVGAADLCGAVAVSLRAD PGLPLQTVALSTFLAPPVASRFALPDRNTLLFDGISTFTVADDGTVAIENLITTYQKNGFGQPDNSYLQVETLFLLMYVI RRLKGVVTSKYGRKKLAANGTRFAPGANIVTPNIIRADQIAEYQAMEFEGYVQNSDAFAAGLIVEQDAQNPSRINELWDG VLIDGLRIFALLAQFRLS
Sequences:
>Translated_498_residues MSVPFKNIPAGDQIRVPLFYAEVDNSQANTATQSQRALIIGQITASGTGTPNTPTICQGKSDAKTVGGPGSMLALMTAAY RDSDDFGEVWYLPLADDGSAVAATGSINFTAAATAVGVLFLYLAGQLVTQTVNASLTAAQLATALVATVNAATDLPVTAA VDGTTTSKVNFTAKNKGLAGNDIDISVNYRGTANGEVTPAGLTFAITAMSGGLVNPSLTAGLANLADMPFDFIVMPYTDA TSLDAVKSFLNDQNGRWAWSKGIYGHFFAMYRGTVGALTTFGVTRNDQHGSVMGFNGSPTPAWVGAADLCGAVAVSLRAD PGLPLQTVALSTFLAPPVASRFALPDRNTLLFDGISTFTVADDGTVAIENLITTYQKNGFGQPDNSYLQVETLFLLMYVI RRLKGVVTSKYGRKKLAANGTRFAPGANIVTPNIIRADQIAEYQAMEFEGYVQNSDAFAAGLIVEQDAQNPSRINELWDG VLIDGLRIFALLAQFRLS >Mature_497_residues SVPFKNIPAGDQIRVPLFYAEVDNSQANTATQSQRALIIGQITASGTGTPNTPTICQGKSDAKTVGGPGSMLALMTAAYR DSDDFGEVWYLPLADDGSAVAATGSINFTAAATAVGVLFLYLAGQLVTQTVNASLTAAQLATALVATVNAATDLPVTAAV DGTTTSKVNFTAKNKGLAGNDIDISVNYRGTANGEVTPAGLTFAITAMSGGLVNPSLTAGLANLADMPFDFIVMPYTDAT SLDAVKSFLNDQNGRWAWSKGIYGHFFAMYRGTVGALTTFGVTRNDQHGSVMGFNGSPTPAWVGAADLCGAVAVSLRADP GLPLQTVALSTFLAPPVASRFALPDRNTLLFDGISTFTVADDGTVAIENLITTYQKNGFGQPDNSYLQVETLFLLMYVIR RLKGVVTSKYGRKKLAANGTRFAPGANIVTPNIIRADQIAEYQAMEFEGYVQNSDAFAAGLIVEQDAQNPSRINELWDGV LIDGLRIFALLAQFRLS
Specific function: Major component of the tail [H]
COG id: COG4386
COG function: function code R; Mu-like prophage tail sheath protein gpL
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein L [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007067 [H]
Pfam domain/function: PF04984 Phage_sheath_1 [H]
EC number: NA
Molecular weight: Translated: 52383; Mature: 52252
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPFKNIPAGDQIRVPLFYAEVDNSQANTATQSQRALIIGQITASGTGTPNTPTICQGK CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCC SDAKTVGGPGSMLALMTAAYRDSDDFGEVWYLPLADDGSAVAATGSINFTAAATAVGVLF CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH LYLAGQLVTQTVNASLTAAQLATALVATVNAATDLPVTAAVDGTTTSKVNFTAKNKGLAG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCC NDIDISVNYRGTANGEVTPAGLTFAITAMSGGLVNPSLTAGLANLADMPFDFIVMPYTDA CCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC TSLDAVKSFLNDQNGRWAWSKGIYGHFFAMYRGTVGALTTFGVTRNDQHGSVMGFNGSPT CHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCHHHHEEECCCCCCCCCCEEECCCCCC PAWVGAADLCGAVAVSLRADPGLPLQTVALSTFLAPPVASRFALPDRNTLLFDGISTFTV CCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCEEEEE ADDGTVAIENLITTYQKNGFGQPDNSYLQVETLFLLMYVIRRLKGVVTSKYGRKKLAANG ECCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC TRFAPGANIVTPNIIRADQIAEYQAMEFEGYVQNSDAFAAGLIVEQDAQNPSRINELWDG CEECCCCCCCCCCCCCHHHHHHHHHEEECCEEECCCCEEEEEEEECCCCCHHHHHHHHHH VLIDGLRIFALLAQFRLS HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVPFKNIPAGDQIRVPLFYAEVDNSQANTATQSQRALIIGQITASGTGTPNTPTICQGK CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCC SDAKTVGGPGSMLALMTAAYRDSDDFGEVWYLPLADDGSAVAATGSINFTAAATAVGVLF CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH LYLAGQLVTQTVNASLTAAQLATALVATVNAATDLPVTAAVDGTTTSKVNFTAKNKGLAG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCC NDIDISVNYRGTANGEVTPAGLTFAITAMSGGLVNPSLTAGLANLADMPFDFIVMPYTDA CCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC TSLDAVKSFLNDQNGRWAWSKGIYGHFFAMYRGTVGALTTFGVTRNDQHGSVMGFNGSPT CHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCHHHHEEECCCCCCCCCCEEECCCCCC PAWVGAADLCGAVAVSLRADPGLPLQTVALSTFLAPPVASRFALPDRNTLLFDGISTFTV CCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCEEEEE ADDGTVAIENLITTYQKNGFGQPDNSYLQVETLFLLMYVIRRLKGVVTSKYGRKKLAANG ECCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC TRFAPGANIVTPNIIRADQIAEYQAMEFEGYVQNSDAFAAGLIVEQDAQNPSRINELWDG CEECCCCCCCCCCCCCHHHHHHHHHEEECCEEECCCCEEEEEEEECCCCCHHHHHHHHHH VLIDGLRIFALLAQFRLS HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]