| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91782761
Identifier: 91782761
GI number: 91782761
Start: 1527642
End: 1529297
Strand: Direct
Name: 91782761
Synonym: Bxe_A3064
Alternate gene names: NA
Gene position: 1527642-1529297 (Clockwise)
Preceding gene: 91782760
Following gene: 91782762
Centisome position: 31.2
GC content: 65.22
Gene sequence:
>1656_bases ATGAGCAGCGCCGCCATACTGGTCGACGCGAGCGGCCGGCCGCTGCGCGCGCGCGCGAATACCGGCGCCGGTCCGGGTAC CCTGGCGAACAACGTCGGCCGTGCGTTCTTCCCGTATCAGGCCGCGGACTGGCAGACGCAGGAGATGGGCGCGTGGCTGC CGTGGATCCGCTCACCCGATGCCGAGATCAACCAGTTCCGCGACCGCATGGTCGCGCGCTCGCGCGATCAGGTTCGTAAC GACGGTCGCTCGAGCGGCGGCATCACGCGGATCCTCGACAACGCCGTCGGCGCGTCGCTGCGTTTGTCGGCCGCGCCGGA CTATCGCGCCCTCGCCGAGATCAGCGGAGCAGCTTTCGATATCAAGTGGGCGAACGAATTCAGGCGTGCAGTGGAGGCGC GTTGGCGCCTCTTTTCGAACGACTTCGGCCGCTACAACGACGTGTCCCGTCAGCTCACCGTCTCGCAGCAGCTGCGTCTC GCGCTGCGCCACAAGCTGATTGACGGTGAGGATCTGGTCATCAATTACTGGATGCCGGAACGGGTGGGGCGCGGCGGCGC GCGATATGCCACGGCCTATCTCGTCGTGGATCCTGACCGCCTGTCGAATCCCAACCAGATGGTCGACACGCGCCACATGC GCAACGGCGTGGAAGTGGATGAAAACGGCGTGCCGCTGGCATACCACATCCGCAAGGCGCACCAGAACGACTGGTACAAC TCTGTCGAAAGCATGATCTGGGAGCGCGTCGAACGCGAGGACGATGACGGCTGGCTGCGCGTGATCCACGACTTCGAGCG TGACCGTGCTGGCCAGAACCGCGGCGTGGGCGTCTTCATTCCGGTGCTCGCCCACGCAAAGATGCTTGCGCGCTACTACG GCATCGAGCTGCAGGCGGCGGCCCTCGCCGCGTCGATTGGTACGTACGTCACGAGCCCATATGATCCGTCGGAAGTTCAG GACGCGGTCGGCGGCGAGGATCACGAGCTCGGCTATTACCAGGGTCTCCGGGCGGAATGGAACGAAGAGCGCCCAGCGAT GTTCAACGGTGTGCGCGTGCCTGCGCTGGCCCCCGGCGAAGACATCAAGGCGTTCACGTCCGACCATCCGCACAACGGCT TTACCGAGTTCGTGCACGAGATGCAGGGTTGTGTCGCATCCGCCCTCGGGATTTCGCTCGAGCAGGTTACGCAGGACTGG TCGAGGAGCAACTACTCGAACATGCGCGGGTCACTGCTGGAGAGCTGGAAGACGCTCATTCGACGCCGGCTCGAATTCTC TGCAGGCACCGCGACGCCCATGTACGCGGTTTGGCTTCGCGAGTCGATGGAGAACGGCGAACTCCCCCTTCCGGCCGGCG CGCCCGATTTTCTCGATGGGGTGACCGCATACGCGGGCTGCAGCTGGCTCGGGCCCGCACGCGGTTGGGTGGATCCGGTG AAAGAGCCGCAGGGTTCGATCCTGAAGATGGATGCGGCGCTGACCACGCTCAAGCAGGAAGCCGCCGAGCAGGGATCCGA CTGGGAGGAGCTGCTCGATCAGCGTCAGATCGAAATCGAGGCCTTCCGCGAACGTGGCATCCCGCTACCCGAATGGGGCG GCAGCGAGATGGCCACGCGCACCGACGAACCTCCCCAGGAGCCGCAGGCAGCATGA
Upstream 100 bases:
>100_bases CGAACCTTGCCGCGGTCCGGATGTTTATCCGTGACCTGCAGGCAGCTCTCAACCCGGGCGTGAAGATGTGCAAGCGCCGC CGCATGGTTCCGTTGTTCTG
Downstream 100 bases:
>100_bases GCAACTATCCCCATCTTGCAACGCGGCTCTTCAACGTGCCGATCGCAATCGCGCCGCAGAAGGCCGAAATCGTAATGGCA GCGCTCGCGGATCGTTTCGG
Product: putative phage portal protein Gp17
Products: NA
Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Bacteriophage Capsid Protein; Phage Portal Protein Lambda; Portal Protein; Phage Portal Protein Lambda Family Protein; Portal Protein Lambda Family; Portal Protein B; Phage Portal Protein Of Lambda Family; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Lytic Transglycosylase Catalytic; Bacteriophage Capsid Protein; Capsid Protein Of Prophage; Prophage; Head-Tail Preconnector Protein Phage Origin; Phage Capsid Protein; Head Portal Protein; Phage Portal Protein Gp; Phage-Related Portal Protein
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MSSAAILVDASGRPLRARANTGAGPGTLANNVGRAFFPYQAADWQTQEMGAWLPWIRSPDAEINQFRDRMVARSRDQVRN DGRSSGGITRILDNAVGASLRLSAAPDYRALAEISGAAFDIKWANEFRRAVEARWRLFSNDFGRYNDVSRQLTVSQQLRL ALRHKLIDGEDLVINYWMPERVGRGGARYATAYLVVDPDRLSNPNQMVDTRHMRNGVEVDENGVPLAYHIRKAHQNDWYN SVESMIWERVEREDDDGWLRVIHDFERDRAGQNRGVGVFIPVLAHAKMLARYYGIELQAAALAASIGTYVTSPYDPSEVQ DAVGGEDHELGYYQGLRAEWNEERPAMFNGVRVPALAPGEDIKAFTSDHPHNGFTEFVHEMQGCVASALGISLEQVTQDW SRSNYSNMRGSLLESWKTLIRRRLEFSAGTATPMYAVWLRESMENGELPLPAGAPDFLDGVTAYAGCSWLGPARGWVDPV KEPQGSILKMDAALTTLKQEAAEQGSDWEELLDQRQIEIEAFRERGIPLPEWGGSEMATRTDEPPQEPQAA
Sequences:
>Translated_551_residues MSSAAILVDASGRPLRARANTGAGPGTLANNVGRAFFPYQAADWQTQEMGAWLPWIRSPDAEINQFRDRMVARSRDQVRN DGRSSGGITRILDNAVGASLRLSAAPDYRALAEISGAAFDIKWANEFRRAVEARWRLFSNDFGRYNDVSRQLTVSQQLRL ALRHKLIDGEDLVINYWMPERVGRGGARYATAYLVVDPDRLSNPNQMVDTRHMRNGVEVDENGVPLAYHIRKAHQNDWYN SVESMIWERVEREDDDGWLRVIHDFERDRAGQNRGVGVFIPVLAHAKMLARYYGIELQAAALAASIGTYVTSPYDPSEVQ DAVGGEDHELGYYQGLRAEWNEERPAMFNGVRVPALAPGEDIKAFTSDHPHNGFTEFVHEMQGCVASALGISLEQVTQDW SRSNYSNMRGSLLESWKTLIRRRLEFSAGTATPMYAVWLRESMENGELPLPAGAPDFLDGVTAYAGCSWLGPARGWVDPV KEPQGSILKMDAALTTLKQEAAEQGSDWEELLDQRQIEIEAFRERGIPLPEWGGSEMATRTDEPPQEPQAA >Mature_550_residues SSAAILVDASGRPLRARANTGAGPGTLANNVGRAFFPYQAADWQTQEMGAWLPWIRSPDAEINQFRDRMVARSRDQVRND GRSSGGITRILDNAVGASLRLSAAPDYRALAEISGAAFDIKWANEFRRAVEARWRLFSNDFGRYNDVSRQLTVSQQLRLA LRHKLIDGEDLVINYWMPERVGRGGARYATAYLVVDPDRLSNPNQMVDTRHMRNGVEVDENGVPLAYHIRKAHQNDWYNS VESMIWERVEREDDDGWLRVIHDFERDRAGQNRGVGVFIPVLAHAKMLARYYGIELQAAALAASIGTYVTSPYDPSEVQD AVGGEDHELGYYQGLRAEWNEERPAMFNGVRVPALAPGEDIKAFTSDHPHNGFTEFVHEMQGCVASALGISLEQVTQDWS RSNYSNMRGSLLESWKTLIRRRLEFSAGTATPMYAVWLRESMENGELPLPAGAPDFLDGVTAYAGCSWLGPARGWVDPVK EPQGSILKMDAALTTLKQEAAEQGSDWEELLDQRQIEIEAFRERGIPLPEWGGSEMATRTDEPPQEPQAA
Specific function: Unknown
COG id: COG5511
COG function: function code R; Bacteriophage capsid protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61627; Mature: 61496
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAAILVDASGRPLRARANTGAGPGTLANNVGRAFFPYQAADWQTQEMGAWLPWIRSPD CCCCEEEEECCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCC AEINQFRDRMVARSRDQVRNDGRSSGGITRILDNAVGASLRLSAAPDYRALAEISGAAFD HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCEEE IKWANEFRRAVEARWRLFSNDFGRYNDVSRQLTVSQQLRLALRHKLIDGEDLVINYWMPE EHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHH RVGRGGARYATAYLVVDPDRLSNPNQMVDTRHMRNGVEVDENGVPLAYHIRKAHQNDWYN HHCCCCCEEEEEEEEECCHHCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCCHHHH SVESMIWERVEREDDDGWLRVIHDFERDRAGQNRGVGVFIPVLAHAKMLARYYGIELQAA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHH ALAASIGTYVTSPYDPSEVQDAVGGEDHELGYYQGLRAEWNEERPAMFNGVRVPALAPGE HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHCCEECCCCCCCC DIKAFTSDHPHNGFTEFVHEMQGCVASALGISLEQVTQDWSRSNYSNMRGSLLESWKTLI CHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RRRLEFSAGTATPMYAVWLRESMENGELPLPAGAPDFLDGVTAYAGCSWLGPARGWVDPV HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC KEPQGSILKMDAALTTLKQEAAEQGSDWEELLDQRQIEIEAFRERGIPLPEWGGSEMATR CCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDEPPQEPQAA CCCCCCCCCCC >Mature Secondary Structure SSAAILVDASGRPLRARANTGAGPGTLANNVGRAFFPYQAADWQTQEMGAWLPWIRSPD CCCEEEEECCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCC AEINQFRDRMVARSRDQVRNDGRSSGGITRILDNAVGASLRLSAAPDYRALAEISGAAFD HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCEEE IKWANEFRRAVEARWRLFSNDFGRYNDVSRQLTVSQQLRLALRHKLIDGEDLVINYWMPE EHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHH RVGRGGARYATAYLVVDPDRLSNPNQMVDTRHMRNGVEVDENGVPLAYHIRKAHQNDWYN HHCCCCCEEEEEEEEECCHHCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCCHHHH SVESMIWERVEREDDDGWLRVIHDFERDRAGQNRGVGVFIPVLAHAKMLARYYGIELQAA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHH ALAASIGTYVTSPYDPSEVQDAVGGEDHELGYYQGLRAEWNEERPAMFNGVRVPALAPGE HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHCCEECCCCCCCC DIKAFTSDHPHNGFTEFVHEMQGCVASALGISLEQVTQDWSRSNYSNMRGSLLESWKTLI CHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RRRLEFSAGTATPMYAVWLRESMENGELPLPAGAPDFLDGVTAYAGCSWLGPARGWVDPV HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC KEPQGSILKMDAALTTLKQEAAEQGSDWEELLDQRQIEIEAFRERGIPLPEWGGSEMATR CCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDEPPQEPQAA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA