Click here to switch to the map view.

The map label for this gene is hrpB3 [H]

Identifier: 91782699

GI number: 91782699

Start: 1476741

End: 1477586

Strand: Direct

Name: hrpB3 [H]

Synonym: Bxe_A3126

Alternate gene names: 91782699

Gene position: 1476741-1477586 (Clockwise)

Preceding gene: 91782698

Following gene: 91782700

Centisome position: 30.16

GC content: 68.32

Gene sequence:

>846_bases
ATGCGCCGCGCCCTGATCCTGCTGCCGCTGCTGCTTCTCCTCGCCGGCTGCAGAACCTCGCTTTTCGAAGGCCTGGACGA
GGACCAGGCCAACCGCATCGTCGCCGCGCTGAGCCATCACGGTATCAACGGCTACAAGGAGCGCAACCCCGACCGCACCT
GGAACATCACGGTCGACGACGCCGACGCGGTGGTCGCCACCGAACTGGCGAGCGCCTATGCGCTGCCGCGCGGCGGCCAC
GCGAATCTCGGCGACCTGTTCAGCCGCCAGGGGCTCATTTCGAGCCCCGAGGAGGACCGCGTCCGCTACGTGTACGGGCT
CTCGCAGGAGCTCTCCGAGACGCTCGAAAAAATGGACGGCGTGCTGCTTGCCCGCGTGCATATCGTGCTGCCGGAGAAGG
ATCCGATGGATTCCACTCAGGACACTTTGCCGTCGGCCTCCGTGATGATGCGTTATCGCAGCGACTACAACCTCGAACCA
ATGCGCGACCGGATTCGTGCGCTGGTCGCGGGCGGCGTCGAAGGGCTGACACCCGCGCGCGTTTCGCTGACGCTCGTCGC
GGTCACGCCCGTGCTGACTTTTCCCGGCGATTGCGCGGCCGGCGGCGATGTCGCGAGCGCCGCCGGCGCCGTCGCGGCCA
CGTCCTGCGAGGAAGCGGGCGGCTACACGCCGTCGCGCTCCACGGCGATGCTGGGCGTGCTGGCCTTGCTGGTGCTGCTG
ATGAGCGGCTCGATCTGGCTGTGGCGCTCGGGACGGCGCACGTGGTTCAAGCCGAAGAAGCGCGGCGCGGCAACCGGCGG
CAGCGTTCAGCCGAATTCAGGCAGCCACGCCGGAGGCGACGCATGA

Upstream 100 bases:

>100_bases
TTCAGGCTCACGTGGGCGCGGTCACGGTGCAAGTGGAAATGATGAAGAGCGTTGCCGATGAATTGGGCCGCGCGATCCAG
ACGCTGACGCAGCGAAGCTG

Downstream 100 bases:

>100_bases
AGCACGCGTACACCTGCGCGCCGGCCGACTGGGCACATCACAGCTGGCTCGAACGTGGGCGGCCCGTCCGTAACGAACGC
GCCGCGCGCGCCGCCCACGC

Product: secretory protein YscJ/FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRRALILLPLLLLLAGCRTSLFEGLDEDQANRIVAALSHHGINGYKERNPDRTWNITVDDADAVVATELASAYALPRGGH
ANLGDLFSRQGLISSPEEDRVRYVYGLSQELSETLEKMDGVLLARVHIVLPEKDPMDSTQDTLPSASVMMRYRSDYNLEP
MRDRIRALVAGGVEGLTPARVSLTLVAVTPVLTFPGDCAAGGDVASAAGAVAATSCEEAGGYTPSRSTAMLGVLALLVLL
MSGSIWLWRSGRRTWFKPKKRGAATGGSVQPNSGSHAGGDA

Sequences:

>Translated_281_residues
MRRALILLPLLLLLAGCRTSLFEGLDEDQANRIVAALSHHGINGYKERNPDRTWNITVDDADAVVATELASAYALPRGGH
ANLGDLFSRQGLISSPEEDRVRYVYGLSQELSETLEKMDGVLLARVHIVLPEKDPMDSTQDTLPSASVMMRYRSDYNLEP
MRDRIRALVAGGVEGLTPARVSLTLVAVTPVLTFPGDCAAGGDVASAAGAVAATSCEEAGGYTPSRSTAMLGVLALLVLL
MSGSIWLWRSGRRTWFKPKKRGAATGGSVQPNSGSHAGGDA
>Mature_281_residues
MRRALILLPLLLLLAGCRTSLFEGLDEDQANRIVAALSHHGINGYKERNPDRTWNITVDDADAVVATELASAYALPRGGH
ANLGDLFSRQGLISSPEEDRVRYVYGLSQELSETLEKMDGVLLARVHIVLPEKDPMDSTQDTLPSASVMMRYRSDYNLEP
MRDRIRALVAGGVEGLTPARVSLTLVAVTPVLTFPGDCAAGGDVASAAGAVAATSCEEAGGYTPSRSTAMLGVLALLVLL
MSGSIWLWRSGRRTWFKPKKRGAATGGSVQPNSGSHAGGDA

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. Could be a part of a specific transport apparatus or a secretion apparatus that is required for pathogenicity. Hrp proteins may form a complex (tu

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 29931; Mature: 29931

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRALILLPLLLLLAGCRTSLFEGLDEDQANRIVAALSHHGINGYKERNPDRTWNITVDD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECC
ADAVVATELASAYALPRGGHANLGDLFSRQGLISSPEEDRVRYVYGLSQELSETLEKMDG
CCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
VLLARVHIVLPEKDPMDSTQDTLPSASVMMRYRSDYNLEPMRDRIRALVAGGVEGLTPAR
EEEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH
VSLTLVAVTPVLTFPGDCAAGGDVASAAGAVAATSCEEAGGYTPSRSTAMLGVLALLVLL
HEEEEEEEEHHHCCCCCCCCCCCHHHHHCHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHH
MSGSIWLWRSGRRTWFKPKKRGAATGGSVQPNSGSHAGGDA
HCCCEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRALILLPLLLLLAGCRTSLFEGLDEDQANRIVAALSHHGINGYKERNPDRTWNITVDD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECC
ADAVVATELASAYALPRGGHANLGDLFSRQGLISSPEEDRVRYVYGLSQELSETLEKMDG
CCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
VLLARVHIVLPEKDPMDSTQDTLPSASVMMRYRSDYNLEPMRDRIRALVAGGVEGLTPAR
EEEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH
VSLTLVAVTPVLTFPGDCAAGGDVASAAGAVAATSCEEAGGYTPSRSTAMLGVLALLVLL
HEEEEEEEEHHHCCCCCCCCCCCHHHHHCHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHH
MSGSIWLWRSGRRTWFKPKKRGAATGGSVQPNSGSHAGGDA
HCCCEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]