| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782676
Identifier: 91782676
GI number: 91782676
Start: 1458106
End: 1459512
Strand: Direct
Name: 91782676
Synonym: Bxe_A3149
Alternate gene names: NA
Gene position: 1458106-1459512 (Clockwise)
Preceding gene: 91782675
Following gene: 91782677
Centisome position: 29.78
GC content: 64.11
Gene sequence:
>1407_bases ATGAGCACCGTCATGACCCGTCCGGGCCGCCTCGCGGCGGCCGGGCAGTGGATGCAGCGGCACGGCGCCGCGATTCGCGG CATTCAGTGGGTCGTGGTGGCGGTGTACGCGTTCCTGATTCTGGTGCCGGCGGTGATGCCGCTGCCGGGCGACACCGCGC ACCTGTGGAACAACCTCACGCTCGCCGCGCAGTTCGTTTTCTGGGGTATCTGGTGGCCGTTCGTATTGCTTTCGATGGTC ATGCTCGGCCGTGTCTGGTGCGGCGTGCTCTGTCCCGAAGGCGCGCTCGCCGAATTCGCCAGCAAATACGGACGAGGCTG GGCGATTCCACACTGGATGCGCTGGGGCGGCTGGCCGTTCGTCGCGTTCGGCCTCACGACCATCTACGGGCAGATGGTGA GTGTGTATCAGTATCCGAAAGCCGTGCTGCTGGTGCTCGGCGGCTCGACCTTCGCGGCGATGATCATCGGCCTGCTATAC GGACGCGAGAAGCGGGTCTGGTGCAAGTATCTGTGCCCCGTCAACGGGGTCTTTTCGCTTCTGGCGCGGCTCGCGCCGTT TCACTACAAGGTCGATGAGGACGCATGGCGCCGTTCCTACAAGGACGGTGAGCATGGGCACCGGGTGATCCCGATCAATT GCGCGCCGCTCGTGCCGTTGCGCAATATGAAGGGCGCGTCGGCCTGTCATATGTGCGGCCGCTGTAGCGGGCACCGCGAC GCGATTGCGTTGACGTGGCGCGCGCCGTCGTCGGAAGTGGTTGAGTTGGGCGACAAACAGGCGAATGCGTGGGACACCGC GTTGATCCTGTACGGCCTGCTCGGCATTGCGATCGGCGCGTTTCACTGGACCGCGTCGCGCTGGTTCGTCGATCTGAAGA TGTTCTTCGCGACCTGGCTGGTCGACCACGACATTACGTGGCCGCTCGACACCAATGCGCCGTGGTTCCTGTTCACGCAT TATCCCGAGCAGAACGATGTGTTTTCGTGGCTCGACGGCACGATGGTGATCGGCTATATCCTCGCCACGGCGCTGGTGTA CGGCACCGCGCTGCTGATCCTGCTGATGGGCGCGACGCGCATGCTGGGGCGCTTCAATGCCGTGCGTCTGCATCATCTGA CACAAGGGCTGATTCCGATTGCCGGCGCGGGCGTGTTCCTCGGCCTGTCCGCTACCACGCTGTCGCTGTTGCGCGCGGAG CATGTGTCGTTGTGGTGGGCGTCGGACATGCGTATCGCGATTCTGGCGATCGCCAATCTGTGGAGCGCATGGCTCGCCTG GCTCGTTACGCGCCGCTATAGCGAGCGCTTCGTGCAGCGCGGCCTCGCGATGGTCTGGTTCGTCGCGGCGCTGGCCGTGG TCGATAGCGCATGGTGGCTGATGTTCTGGGGTTGGGCTTCGAAATAA
Upstream 100 bases:
>100_bases TGATGAATCTGCTGGCGTACGCGCTGTACTGGGCGGTGGTTTATCTGCTGGTGCGCCGCGCGAATCGCAAGCCGGTGCAG CAAGCCGCCGGGCGTGCGGC
Downstream 100 bases:
>100_bases GGCTTCAAAGAAGGCTTCAAAGCAACGTTTCAACGCAACGTTTCAACGCAACGCATGGCCCGTCGCTGCGACCTGCCGCA GTAGCCGGCGCCGGCCCAGA
Product: putative nitrogen fixation protein VnfA
Products: NA
Alternate protein names: Regulatory Protein; Polyferredoxin-Like Protein; Polyferredoxin; Polyferredoxin-Like; Nitrogen Assimilation Regulatory Protein; Ferredoxin; Polyferredoxin Protein; Sigma-54 Interaction Domain Family
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSTVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLTLAAQFVFWGIWWPFVLLSMV MLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLY GREKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWLVDHDITWPLDTNAPWFLFTH YPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATRMLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAE HVSLWWASDMRIAILAIANLWSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK
Sequences:
>Translated_468_residues MSTVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLTLAAQFVFWGIWWPFVLLSMV MLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLY GREKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWLVDHDITWPLDTNAPWFLFTH YPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATRMLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAE HVSLWWASDMRIAILAIANLWSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK >Mature_467_residues STVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLTLAAQFVFWGIWWPFVLLSMVM LGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLYG REKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRDA IALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWLVDHDITWPLDTNAPWFLFTHY PEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATRMLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAEH VSLWWASDMRIAILAIANLWSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK
Specific function: Unknown
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52622; Mature: 52491
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLT CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHH LAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCHH VAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLYGREKRVWCKYLCPVNGVFSL HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH LARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD HHHHCCCCEECCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCC AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWL EEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDHDITWPLDTNAPWFLFTHYPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATR HCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAEHVSLWWASDMRIAILAIANL HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH WSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLT CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHH LAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCHH VAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLYGREKRVWCKYLCPVNGVFSL HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH LARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD HHHHCCCCEECCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCC AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWL EEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDHDITWPLDTNAPWFLFTHYPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATR HCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAEHVSLWWASDMRIAILAIANL HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH WSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA