Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91782676

Identifier: 91782676

GI number: 91782676

Start: 1458106

End: 1459512

Strand: Direct

Name: 91782676

Synonym: Bxe_A3149

Alternate gene names: NA

Gene position: 1458106-1459512 (Clockwise)

Preceding gene: 91782675

Following gene: 91782677

Centisome position: 29.78

GC content: 64.11

Gene sequence:

>1407_bases
ATGAGCACCGTCATGACCCGTCCGGGCCGCCTCGCGGCGGCCGGGCAGTGGATGCAGCGGCACGGCGCCGCGATTCGCGG
CATTCAGTGGGTCGTGGTGGCGGTGTACGCGTTCCTGATTCTGGTGCCGGCGGTGATGCCGCTGCCGGGCGACACCGCGC
ACCTGTGGAACAACCTCACGCTCGCCGCGCAGTTCGTTTTCTGGGGTATCTGGTGGCCGTTCGTATTGCTTTCGATGGTC
ATGCTCGGCCGTGTCTGGTGCGGCGTGCTCTGTCCCGAAGGCGCGCTCGCCGAATTCGCCAGCAAATACGGACGAGGCTG
GGCGATTCCACACTGGATGCGCTGGGGCGGCTGGCCGTTCGTCGCGTTCGGCCTCACGACCATCTACGGGCAGATGGTGA
GTGTGTATCAGTATCCGAAAGCCGTGCTGCTGGTGCTCGGCGGCTCGACCTTCGCGGCGATGATCATCGGCCTGCTATAC
GGACGCGAGAAGCGGGTCTGGTGCAAGTATCTGTGCCCCGTCAACGGGGTCTTTTCGCTTCTGGCGCGGCTCGCGCCGTT
TCACTACAAGGTCGATGAGGACGCATGGCGCCGTTCCTACAAGGACGGTGAGCATGGGCACCGGGTGATCCCGATCAATT
GCGCGCCGCTCGTGCCGTTGCGCAATATGAAGGGCGCGTCGGCCTGTCATATGTGCGGCCGCTGTAGCGGGCACCGCGAC
GCGATTGCGTTGACGTGGCGCGCGCCGTCGTCGGAAGTGGTTGAGTTGGGCGACAAACAGGCGAATGCGTGGGACACCGC
GTTGATCCTGTACGGCCTGCTCGGCATTGCGATCGGCGCGTTTCACTGGACCGCGTCGCGCTGGTTCGTCGATCTGAAGA
TGTTCTTCGCGACCTGGCTGGTCGACCACGACATTACGTGGCCGCTCGACACCAATGCGCCGTGGTTCCTGTTCACGCAT
TATCCCGAGCAGAACGATGTGTTTTCGTGGCTCGACGGCACGATGGTGATCGGCTATATCCTCGCCACGGCGCTGGTGTA
CGGCACCGCGCTGCTGATCCTGCTGATGGGCGCGACGCGCATGCTGGGGCGCTTCAATGCCGTGCGTCTGCATCATCTGA
CACAAGGGCTGATTCCGATTGCCGGCGCGGGCGTGTTCCTCGGCCTGTCCGCTACCACGCTGTCGCTGTTGCGCGCGGAG
CATGTGTCGTTGTGGTGGGCGTCGGACATGCGTATCGCGATTCTGGCGATCGCCAATCTGTGGAGCGCATGGCTCGCCTG
GCTCGTTACGCGCCGCTATAGCGAGCGCTTCGTGCAGCGCGGCCTCGCGATGGTCTGGTTCGTCGCGGCGCTGGCCGTGG
TCGATAGCGCATGGTGGCTGATGTTCTGGGGTTGGGCTTCGAAATAA

Upstream 100 bases:

>100_bases
TGATGAATCTGCTGGCGTACGCGCTGTACTGGGCGGTGGTTTATCTGCTGGTGCGCCGCGCGAATCGCAAGCCGGTGCAG
CAAGCCGCCGGGCGTGCGGC

Downstream 100 bases:

>100_bases
GGCTTCAAAGAAGGCTTCAAAGCAACGTTTCAACGCAACGTTTCAACGCAACGCATGGCCCGTCGCTGCGACCTGCCGCA
GTAGCCGGCGCCGGCCCAGA

Product: putative nitrogen fixation protein VnfA

Products: NA

Alternate protein names: Regulatory Protein; Polyferredoxin-Like Protein; Polyferredoxin; Polyferredoxin-Like; Nitrogen Assimilation Regulatory Protein; Ferredoxin; Polyferredoxin Protein; Sigma-54 Interaction Domain Family

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSTVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLTLAAQFVFWGIWWPFVLLSMV
MLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLY
GREKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD
AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWLVDHDITWPLDTNAPWFLFTH
YPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATRMLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAE
HVSLWWASDMRIAILAIANLWSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK

Sequences:

>Translated_468_residues
MSTVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLTLAAQFVFWGIWWPFVLLSMV
MLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLY
GREKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD
AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWLVDHDITWPLDTNAPWFLFTH
YPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATRMLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAE
HVSLWWASDMRIAILAIANLWSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK
>Mature_467_residues
STVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLTLAAQFVFWGIWWPFVLLSMVM
LGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLYG
REKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRDA
IALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWLVDHDITWPLDTNAPWFLFTHY
PEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATRMLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAEH
VSLWWASDMRIAILAIANLWSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52622; Mature: 52491

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLT
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHH
LAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCHH
VAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLYGREKRVWCKYLCPVNGVFSL
HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
LARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD
HHHHCCCCEECCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCC
AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWL
EEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDHDITWPLDTNAPWFLFTHYPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATR
HCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAEHVSLWWASDMRIAILAIANL
HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
WSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STVMTRPGRLAAAGQWMQRHGAAIRGIQWVVVAVYAFLILVPAVMPLPGDTAHLWNNLT
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHH
LAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKYGRGWAIPHWMRWGGWPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCHH
VAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMIIGLLYGREKRVWCKYLCPVNGVFSL
HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
LARLAPFHYKVDEDAWRRSYKDGEHGHRVIPINCAPLVPLRNMKGASACHMCGRCSGHRD
HHHHCCCCEECCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCC
AIALTWRAPSSEVVELGDKQANAWDTALILYGLLGIAIGAFHWTASRWFVDLKMFFATWL
EEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDHDITWPLDTNAPWFLFTHYPEQNDVFSWLDGTMVIGYILATALVYGTALLILLMGATR
HCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLGRFNAVRLHHLTQGLIPIAGAGVFLGLSATTLSLLRAEHVSLWWASDMRIAILAIANL
HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
WSAWLAWLVTRRYSERFVQRGLAMVWFVAALAVVDSAWWLMFWGWASK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA