Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yibF [C]

Identifier: 91782643

GI number: 91782643

Start: 1415033

End: 1415680

Strand: Direct

Name: yibF [C]

Synonym: Bxe_A3183

Alternate gene names: 91782643

Gene position: 1415033-1415680 (Clockwise)

Preceding gene: 91782637

Following gene: 91782646

Centisome position: 28.9

GC content: 59.88

Gene sequence:

>648_bases
ATGATCAGGCTGTGCGGTTTCGCGCTTTCTAACTATTACAACAAAGTGAAGTTCGTGCTGCTCGAACACGGTATTCCGTT
CGAGGAAGTGGCGGTGCTGCCGAGCCAGGAAGAGGCCATGCTCGAGCATTCGCCGCTCGGCAAGGTGCCTTATCTGCAGA
CTGAAGACGGCGATCTGTGCGAATCGCAATGCATTGTCGAGTATCTGGCCGCGCGCTTTCCCGACAAGGCGATTTTCTCC
ACCGACCCGTGGGAAGCGGCCAAGGAGCGCGAGCTGATCATGTTCGTGGATGTGCATCTCGAACTGACCGCGCGCAATCT
CTACAAGGAAGCGTTCTTCGGCGGCACCGTGACCGAGGCGACCAAAGGGCGTGTCGAGAAACTGCTTGAGCATCATATTG
CCGGCTTCAGGCGGATCGCGAAGTTCGCGCCGTATCTGAGCGGCGAGCGTTTTAGCGTTGCGGATACGGCCGGGTACGTG
AGCTTGCCGCTGGTGGGCATGGCGACGCAGACCATCTACGGGCGCGATTTTCTGCTGGACGCCGGCGTGGACTGGAAGGG
CTACGTGAAAGCGATCAACGCACGGCCGGCCGCGCAGCGTGTGACCGAGGATCGCAAGGCATATATCGCCGCGTCGCGTC
CGGTTTGA

Upstream 100 bases:

>100_bases
TAGAATAGCACGATCGTGCAATTTACCGGATGATTGATCGAAGACCGCTGCTTTGACGTTGACAGACGGTCACATACAAC
CCGAAGGAAGGAGACACCCG

Downstream 100 bases:

>100_bases
CGCGTGCGGCCTGCCGGCAAGCGAACGACGGGCGCGCGCCGTGCACGCCCGGGCCGTTGCGCGCGATGGCAAGGAACGGG
GAAGCGTTCTTGGCATCGCG

Product: putative glutathione S-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIRLCGFALSNYYNKVKFVLLEHGIPFEEVAVLPSQEEAMLEHSPLGKVPYLQTEDGDLCESQCIVEYLAARFPDKAIFS
TDPWEAAKERELIMFVDVHLELTARNLYKEAFFGGTVTEATKGRVEKLLEHHIAGFRRIAKFAPYLSGERFSVADTAGYV
SLPLVGMATQTIYGRDFLLDAGVDWKGYVKAINARPAAQRVTEDRKAYIAASRPV

Sequences:

>Translated_215_residues
MIRLCGFALSNYYNKVKFVLLEHGIPFEEVAVLPSQEEAMLEHSPLGKVPYLQTEDGDLCESQCIVEYLAARFPDKAIFS
TDPWEAAKERELIMFVDVHLELTARNLYKEAFFGGTVTEATKGRVEKLLEHHIAGFRRIAKFAPYLSGERFSVADTAGYV
SLPLVGMATQTIYGRDFLLDAGVDWKGYVKAINARPAAQRVTEDRKAYIAASRPV
>Mature_215_residues
MIRLCGFALSNYYNKVKFVLLEHGIPFEEVAVLPSQEEAMLEHSPLGKVPYLQTEDGDLCESQCIVEYLAARFPDKAIFS
TDPWEAAKERELIMFVDVHLELTARNLYKEAFFGGTVTEATKGRVEKLLEHHIAGFRRIAKFAPYLSGERFSVADTAGYV
SLPLVGMATQTIYGRDFLLDAGVDWKGYVKAINARPAAQRVTEDRKAYIAASRPV

Specific function: Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: =2.5.1.18 [H]

Molecular weight: Translated: 24113; Mature: 24113

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLCGFALSNYYNKVKFVLLEHGIPFEEVAVLPSQEEAMLEHSPLGKVPYLQTEDGDLC
CEEEHHHHHHHHHHHHEEEEEECCCCHHHEEECCCCHHHHHHCCCCCCCCEEECCCCCHH
ESQCIVEYLAARFPDKAIFSTDPWEAAKERELIMFVDVHLELTARNLYKEAFFGGTVTEA
HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEEEEEEEEHHHHHHHHHHHCCCCCCHH
TKGRVEKLLEHHIAGFRRIAKFAPYLSGERFSVADTAGYVSLPLVGMATQTIYGRDFLLD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHCHHHHHHHHHCCCEEEEE
AGVDWKGYVKAINARPAAQRVTEDRKAYIAASRPV
CCCCHHHHHEEECCCHHHHHHHHHHHEEEEECCCC
>Mature Secondary Structure
MIRLCGFALSNYYNKVKFVLLEHGIPFEEVAVLPSQEEAMLEHSPLGKVPYLQTEDGDLC
CEEEHHHHHHHHHHHHEEEEEECCCCHHHEEECCCCHHHHHHCCCCCCCCEEECCCCCHH
ESQCIVEYLAARFPDKAIFSTDPWEAAKERELIMFVDVHLELTARNLYKEAFFGGTVTEA
HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEEEEEEEEHHHHHHHHHHHCCCCCCHH
TKGRVEKLLEHHIAGFRRIAKFAPYLSGERFSVADTAGYVSLPLVGMATQTIYGRDFLLD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHCHHHHHHHHHCCCEEEEE
AGVDWKGYVKAINARPAAQRVTEDRKAYIAASRPV
CCCCHHHHHEEECCCHHHHHHHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11900268 [H]