| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is qorA [H]
Identifier: 91782609
GI number: 91782609
Start: 1379597
End: 1380613
Strand: Direct
Name: qorA [H]
Synonym: Bxe_A3217
Alternate gene names: 91782609
Gene position: 1379597-1380613 (Clockwise)
Preceding gene: 91782608
Following gene: 91782610
Centisome position: 28.18
GC content: 65.09
Gene sequence:
>1017_bases ATGAAAGCGATCGAAATCACCGAATTCGGTGCACCGGAAGTCCTGAAGCTGGCCGAGCGGCCCACGCCGCAACCGGCGGC GGGCGAGGTGCTGATCAAGGTGGCCGCATCCGGCATCAACCGTCCGGACGTGTTCCAGCGCAAAGGCGGCTATGCGCCGC CGCCGGGCGCGTCGGATCTGCCGGGGCTGGAAGTGGCGGGAGAAATTGTCGGCGGTACGATCGACGAAAAGAACAACCCG TTTGGCCTGAAGGTCGGCGATCGCGTATGCGCGTTGCTCGCCGGCGGCGGCTATGCGGAATACGCGGTCGCGCCGCTGCT GCAGTGCCTGCCGGTGCCGGCAGGCCTGTCGGACGTCGAAGCGGCTTCGCTGCCGGAAACGTTCTTCACGGTGTGGAGCA ATGTGTTCGACCGTGCACAACTGGGCAAGGGCGAAGGCGCGCCTAACGAAACGCTGCTGGTGCAGGGCGGTTCGAGCGGC ATCGGCGTGACGGCGATCCAGATTGCGCATGCACTCGGTTTTCGCGTGTTCGCGACCGCCGGGTCGGACGAGAAATGCCG TGCGTGTGAGGCGTTGGGCGCCGAGCGGGCGATCAACTACAAGACGGAAGATTTCGTCGAAGTGATCAAGTCGCTCACCA ACGACCGCGGCGTCGACGTGGTCCTCGACATGGTGGCGGGCAGTTATGTGTCGCGCGAGCTGACGGCGTTGGCCGACGGC GGCCGCATCGTGCTGATCGCGTTGCTGGGCGGCGCGAAAGCGGAACTGAATCTGAACGAAGTGCTGCGCCGCCGTTTGAC GGTGACCGGTTCGACGCTGCGTCCGCGGCCGATCGAATTCAAGGCGAAGATTGCCGCGCAACTGAAAGAGCGCGTCTGGC CGCATCTCGAAGACGGCCGCATCAAGCCCGTGGTGCATCGCGTGTTTCCGGCCGCGCAGGCGGCCGAGGCGCACGCGCTG ATGGAAAGCAGTACGCATGTCGGCAAGATTGTGCTGTCTTGGGGCCAGGACGCTTGA
Upstream 100 bases:
>100_bases CACGCGGGCGCCCCGGAGGAAATCCCGTCGGGGCACACAAACGGGTACTCTGTTTGTTCATGCCGGCATGCAACGCAATC CAATCTTGGAGTTGACGCAG
Downstream 100 bases:
>100_bases CACGGTCGGTTTGACCCGATCCACCCCACGCAGTAAAATTGCGCGTTTTGCGCACGCCGCATGAATCCGCAAGGCGGACT GTAAGCGCAAACGAAGTCCG
Product: putative NADPH quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKAIEITEFGAPEVLKLAERPTPQPAAGEVLIKVAASGINRPDVFQRKGGYAPPPGASDLPGLEVAGEIVGGTIDEKNNP FGLKVGDRVCALLAGGGYAEYAVAPLLQCLPVPAGLSDVEAASLPETFFTVWSNVFDRAQLGKGEGAPNETLLVQGGSSG IGVTAIQIAHALGFRVFATAGSDEKCRACEALGAERAINYKTEDFVEVIKSLTNDRGVDVVLDMVAGSYVSRELTALADG GRIVLIALLGGAKAELNLNEVLRRRLTVTGSTLRPRPIEFKAKIAAQLKERVWPHLEDGRIKPVVHRVFPAAQAAEAHAL MESSTHVGKIVLSWGQDA
Sequences:
>Translated_338_residues MKAIEITEFGAPEVLKLAERPTPQPAAGEVLIKVAASGINRPDVFQRKGGYAPPPGASDLPGLEVAGEIVGGTIDEKNNP FGLKVGDRVCALLAGGGYAEYAVAPLLQCLPVPAGLSDVEAASLPETFFTVWSNVFDRAQLGKGEGAPNETLLVQGGSSG IGVTAIQIAHALGFRVFATAGSDEKCRACEALGAERAINYKTEDFVEVIKSLTNDRGVDVVLDMVAGSYVSRELTALADG GRIVLIALLGGAKAELNLNEVLRRRLTVTGSTLRPRPIEFKAKIAAQLKERVWPHLEDGRIKPVVHRVFPAAQAAEAHAL MESSTHVGKIVLSWGQDA >Mature_338_residues MKAIEITEFGAPEVLKLAERPTPQPAAGEVLIKVAASGINRPDVFQRKGGYAPPPGASDLPGLEVAGEIVGGTIDEKNNP FGLKVGDRVCALLAGGGYAEYAVAPLLQCLPVPAGLSDVEAASLPETFFTVWSNVFDRAQLGKGEGAPNETLLVQGGSSG IGVTAIQIAHALGFRVFATAGSDEKCRACEALGAERAINYKTEDFVEVIKSLTNDRGVDVVLDMVAGSYVSRELTALADG GRIVLIALLGGAKAELNLNEVLRRRLTVTGSTLRPRPIEFKAKIAAQLKERVWPHLEDGRIKPVVHRVFPAAQAAEAHAL MESSTHVGKIVLSWGQDA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=342, Percent_Identity=37.4269005847953, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI22538444, Length=342, Percent_Identity=37.4269005847953, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI194239674, Length=337, Percent_Identity=32.6409495548961, Blast_Score=165, Evalue=5e-41, Organism=Homo sapiens, GI13236495, Length=337, Percent_Identity=32.6409495548961, Blast_Score=165, Evalue=5e-41, Organism=Homo sapiens, GI194239676, Length=337, Percent_Identity=29.9703264094956, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI18379349, Length=351, Percent_Identity=28.2051282051282, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI24308257, Length=356, Percent_Identity=25.561797752809, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI197927207, Length=184, Percent_Identity=30.4347826086957, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI28557745, Length=281, Percent_Identity=29.5373665480427, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI41872631, Length=325, Percent_Identity=28.6153846153846, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI47519420, Length=364, Percent_Identity=26.0989010989011, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790485, Length=338, Percent_Identity=30.4733727810651, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI226510941, Length=300, Percent_Identity=27, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17507255, Length=346, Percent_Identity=28.6127167630058, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319520, Length=347, Percent_Identity=26.2247838616715, Blast_Score=89, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6323961, Length=291, Percent_Identity=26.1168384879725, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6319621, Length=291, Percent_Identity=24.3986254295533, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330659, Length=283, Percent_Identity=26.1484098939929, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI19920632, Length=298, Percent_Identity=26.1744966442953, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581345, Length=255, Percent_Identity=26.2745098039216, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35631; Mature: 35631
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIEITEFGAPEVLKLAERPTPQPAAGEVLIKVAASGINRPDVFQRKGGYAPPPGASDL CCCEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC PGLEVAGEIVGGTIDEKNNPFGLKVGDRVCALLAGGGYAEYAVAPLLQCLPVPAGLSDVE CCHHHHHHHHCCEECCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCH AASLPETFFTVWSNVFDRAQLGKGEGAPNETLLVQGGSSGIGVTAIQIAHALGFRVFATA HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEC GSDEKCRACEALGAERAINYKTEDFVEVIKSLTNDRGVDVVLDMVAGSYVSRELTALADG CCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC GRIVLIALLGGAKAELNLNEVLRRRLTVTGSTLRPRPIEFKAKIAAQLKERVWPHLEDGR CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC IKPVVHRVFPAAQAAEAHALMESSTHVGKIVLSWGQDA CHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MKAIEITEFGAPEVLKLAERPTPQPAAGEVLIKVAASGINRPDVFQRKGGYAPPPGASDL CCCEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC PGLEVAGEIVGGTIDEKNNPFGLKVGDRVCALLAGGGYAEYAVAPLLQCLPVPAGLSDVE CCHHHHHHHHCCEECCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCH AASLPETFFTVWSNVFDRAQLGKGEGAPNETLLVQGGSSGIGVTAIQIAHALGFRVFATA HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEC GSDEKCRACEALGAERAINYKTEDFVEVIKSLTNDRGVDVVLDMVAGSYVSRELTALADG CCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC GRIVLIALLGGAKAELNLNEVLRRRLTVTGSTLRPRPIEFKAKIAAQLKERVWPHLEDGR CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC IKPVVHRVFPAAQAAEAHALMESSTHVGKIVLSWGQDA CHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]