| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ybbP [H]
Identifier: 91782583
GI number: 91782583
Start: 1350644
End: 1353226
Strand: Direct
Name: ybbP [H]
Synonym: Bxe_A3245
Alternate gene names: 91782583
Gene position: 1350644-1353226 (Clockwise)
Preceding gene: 91782582
Following gene: 91782584
Centisome position: 27.59
GC content: 68.1
Gene sequence:
>2583_bases TTGAGCGATACGGTACGGGGTTCCACGGCGCGCACGGCTTCACCTTCGGCACGCCGGTTCGGCGGTATGGATCTGTTGCG CCAGTCCGTGCGCATGACGTCGCGCGACTGGCGCGCGGGCGAATTGACGATGCTGCTGCTGGCGCTGGTGCTGGCCGTGG CGGCTTTGTCGAGTGTCGGCTTTCTGGCTGACCGTCTGCACCAGGGGCTCGAGCGCGACGCGCGGCGCATGATCGCCGCC GACTTCATCGTGCGGGCCGATCATCCGGTCGATCCGCAATTCGCCGCGCAAGCCAGAGCGCTCGGTCTGGACACCGCCAG CACGGCGATCTTTCCCAGCATGATCAATTCGACCGGCGCGCAGCCGGTCTCGCGGCTCGCCGCCATCAAGGCGGTGTCGC CGGGTTATCCGTTGCGCGGCGCGTTGCGCATCGCCCCGGCGCCGGGTGCGGCGGACTATCCGGCGCGATCGATTCCGCCG CCGGGCGTCGTGTGGGTCGATCAGGCGCTGCTCGACGCGTTGAAGCTGCATGTCGGCGATACGGTGAAAGTCGGCAACCG CAACTTCACGATCGGCGCGGTGATCACGCGCGAGCTCGACCGCGGCTTCTCGTTCGTCAATTTCTCGCCGCGCCTGATGC TGCGCGTCGACGACGTGCTGTCCACCGGCCTCATCACCTACGGCAGCCGCGTGACCTATCGCCTGCTGGTCGCGGGGGCG GACGAATCGGTGGCGCGTTTCGCGCAGTTCGCGCACGAGCGGGTGGACGGCGGCAAGATGCGCGGCGTCGCGCTCGAATC GTTGCAGGACGGCCAGCCGCAAGTGCGCCAGACGCTCGACCGCGCGAGTCACTTCCTCACGCTCGTCTCGCTGCTCACCG CGTTGCTGGCGGCCGTGGCGATTGCGATGGCCGCGCATCGGTACATGCGCCGGCATCTGGACGGCTGTGCGGTGATGCGC TGCCTCGGCGTCAGTCAGACGACACTGCGCGCGCTCTTCACGCTCGAATTCGTGGGGTTGGGTTTGATCGGCGGCGCGCT TGGCGTGGCGCTCGGTTATCTGGGGCATCTCGCGCTGCTCACGTGGCTCGGCAGTCTGATCGATGTCGCGCTGCCGTATC CGACCGCATGGCCGGCGCTCGAAGGCATCGCAGCCGGTCTCGTGCTGTTGCTGGGCTTCGCGCTGCCGCCGCTGTTGCCG CTTACGCGCGTGCCGCCGGTGCGCGTGCTGCGCCGCGAATGGGGCGAAGCGGGGCGCACGGCGTGGGCGGCCTATGCGCT CGGCATCGTGCTGTTCGCCGCGCTGCTGATCGTCGCGGCGGGCGAACTGAAGCTCGGCGGGATCGTGGCGGGCGGCTTCG CGGGCGGGCTGCTGGTGTTCGCGTGCATCGCGCGGCTGGCGTTGTGGGGCGCGGCGCGGCTCGTGCGCAGCGAGCGCGTG AATGCGGGGATCGGCTGGCGTTATGCACTGGCCTCGCTCGAACGGCGCAGCAGCGCGAGCGCATTGCAGATCACCGCGCT CGGCATCGGCCTGATGTGCCTGTTGCTGATCGCCATGACGCGCAATGACCTCGTGGCCGGCTGGCGCAAGTCGACGCCGC CCGACGCGCCGAACGAATTCATCATCGACATCCAGCCCGATCAGCGTGACGCCGTGACGCAGTATCTGGGCGCGCACGGC TTACCCGGCACGGTGCTTTCGCCGATGGTGCGCGGCCGGCTGACGGCGATCAATGGCAAGCCGGTCAATCCGGATTCGTT CAAGGGCGACGACGCCAAACGTCTCGTGGACCGCGAATTCAATCTGTCGTACACCACCGAGCTGCCCGACGACAATCGCC TCGCCGCCGGCACGTGGTACGGCGACACGAAAACGCCGCAGATTTCGATCGAGCAGGGACTGGCCAAACTGATCAACGTG AAGCCCGGCGACGTGCTGCGTTTCGACGTGACCGGCTTGCAGATCGACGCGCCGGTTACGAGTGTGCGCAAGCTCGACTG GGGTTCGTTCAAGGTCAACTTCTTCGTGCTGATGCCGCTCGCCGCGCTGCAGGATTTCCCGGCGACGTTCATTACCAGCT TCCATCTGCCGCAGGAAAAGCAGTCGATCATCGACGGCCTGATCGCCGCCTATCCGAACCTCACGGCGATCGATACCGGG CCGATTCTCGCGCAGGTGCAGCGCGTGCTGCAGCAGGTGATCGGCGCGGTGCAGTTCCTGTTCGCATTCACGCTCGCAGC GGGCGTGCTCGTGCTGTACGCGGCGCTCGCCGGCACGCGCGATGAGCGCATGCGAGAATCCGCGCTGCTGCGCGCGCTGG GGGCGTCGCATCGTCAGGTGCGCTCGGTGCAGATCGCCGAGTTTGTCGCGGTAGGCGCGCTGGCGGGGCTGATGGCGGCG GCAGGCGCGCAGGCGATCGGCTACGTACTGGCAACGCGCGTGTTCGAGTTCTATCTGAGCTTCGATCCGTGGCTGCTGCC GGCGGGTATCGCCGCCGGCATAGCGTGCGCCGGCGTGGGCGGCTGGCTGAGCTTGCGGCATGTGCTGGCGCGGCCCGCGT TGCAATCGCTGCGGGACGCGTGA
Upstream 100 bases:
>100_bases TGGCCGGCTGGGCATTGCCGCGGCTCTGGCGCGGGGTGCAGGGCGGTTTTCGCGGCATGGCGACGCACATGGTGTCGCGC TTTGCCAGGAGCAGGCACGA
Downstream 100 bases:
>100_bases ATTCTTATTTTCTGGTTGACGAGTGGGTATGAGCGACTTGAACGACGAAGTGTCCGCGGCGCAGCCGACGGCCTTCGAAC TGGTGGGCGGTGAAGCGCGC
Product: ABC lysophospholipase exporter, fused innermembrane subunits, FtsX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 860; Mature: 859
Protein sequence:
>860_residues MSDTVRGSTARTASPSARRFGGMDLLRQSVRMTSRDWRAGELTMLLLALVLAVAALSSVGFLADRLHQGLERDARRMIAA DFIVRADHPVDPQFAAQARALGLDTASTAIFPSMINSTGAQPVSRLAAIKAVSPGYPLRGALRIAPAPGAADYPARSIPP PGVVWVDQALLDALKLHVGDTVKVGNRNFTIGAVITRELDRGFSFVNFSPRLMLRVDDVLSTGLITYGSRVTYRLLVAGA DESVARFAQFAHERVDGGKMRGVALESLQDGQPQVRQTLDRASHFLTLVSLLTALLAAVAIAMAAHRYMRRHLDGCAVMR CLGVSQTTLRALFTLEFVGLGLIGGALGVALGYLGHLALLTWLGSLIDVALPYPTAWPALEGIAAGLVLLLGFALPPLLP LTRVPPVRVLRREWGEAGRTAWAAYALGIVLFAALLIVAAGELKLGGIVAGGFAGGLLVFACIARLALWGAARLVRSERV NAGIGWRYALASLERRSSASALQITALGIGLMCLLLIAMTRNDLVAGWRKSTPPDAPNEFIIDIQPDQRDAVTQYLGAHG LPGTVLSPMVRGRLTAINGKPVNPDSFKGDDAKRLVDREFNLSYTTELPDDNRLAAGTWYGDTKTPQISIEQGLAKLINV KPGDVLRFDVTGLQIDAPVTSVRKLDWGSFKVNFFVLMPLAALQDFPATFITSFHLPQEKQSIIDGLIAAYPNLTAIDTG PILAQVQRVLQQVIGAVQFLFAFTLAAGVLVLYAALAGTRDERMRESALLRALGASHRQVRSVQIAEFVAVGALAGLMAA AGAQAIGYVLATRVFEFYLSFDPWLLPAGIAAGIACAGVGGWLSLRHVLARPALQSLRDA
Sequences:
>Translated_860_residues MSDTVRGSTARTASPSARRFGGMDLLRQSVRMTSRDWRAGELTMLLLALVLAVAALSSVGFLADRLHQGLERDARRMIAA DFIVRADHPVDPQFAAQARALGLDTASTAIFPSMINSTGAQPVSRLAAIKAVSPGYPLRGALRIAPAPGAADYPARSIPP PGVVWVDQALLDALKLHVGDTVKVGNRNFTIGAVITRELDRGFSFVNFSPRLMLRVDDVLSTGLITYGSRVTYRLLVAGA DESVARFAQFAHERVDGGKMRGVALESLQDGQPQVRQTLDRASHFLTLVSLLTALLAAVAIAMAAHRYMRRHLDGCAVMR CLGVSQTTLRALFTLEFVGLGLIGGALGVALGYLGHLALLTWLGSLIDVALPYPTAWPALEGIAAGLVLLLGFALPPLLP LTRVPPVRVLRREWGEAGRTAWAAYALGIVLFAALLIVAAGELKLGGIVAGGFAGGLLVFACIARLALWGAARLVRSERV NAGIGWRYALASLERRSSASALQITALGIGLMCLLLIAMTRNDLVAGWRKSTPPDAPNEFIIDIQPDQRDAVTQYLGAHG LPGTVLSPMVRGRLTAINGKPVNPDSFKGDDAKRLVDREFNLSYTTELPDDNRLAAGTWYGDTKTPQISIEQGLAKLINV KPGDVLRFDVTGLQIDAPVTSVRKLDWGSFKVNFFVLMPLAALQDFPATFITSFHLPQEKQSIIDGLIAAYPNLTAIDTG PILAQVQRVLQQVIGAVQFLFAFTLAAGVLVLYAALAGTRDERMRESALLRALGASHRQVRSVQIAEFVAVGALAGLMAA AGAQAIGYVLATRVFEFYLSFDPWLLPAGIAAGIACAGVGGWLSLRHVLARPALQSLRDA >Mature_859_residues SDTVRGSTARTASPSARRFGGMDLLRQSVRMTSRDWRAGELTMLLLALVLAVAALSSVGFLADRLHQGLERDARRMIAAD FIVRADHPVDPQFAAQARALGLDTASTAIFPSMINSTGAQPVSRLAAIKAVSPGYPLRGALRIAPAPGAADYPARSIPPP GVVWVDQALLDALKLHVGDTVKVGNRNFTIGAVITRELDRGFSFVNFSPRLMLRVDDVLSTGLITYGSRVTYRLLVAGAD ESVARFAQFAHERVDGGKMRGVALESLQDGQPQVRQTLDRASHFLTLVSLLTALLAAVAIAMAAHRYMRRHLDGCAVMRC LGVSQTTLRALFTLEFVGLGLIGGALGVALGYLGHLALLTWLGSLIDVALPYPTAWPALEGIAAGLVLLLGFALPPLLPL TRVPPVRVLRREWGEAGRTAWAAYALGIVLFAALLIVAAGELKLGGIVAGGFAGGLLVFACIARLALWGAARLVRSERVN AGIGWRYALASLERRSSASALQITALGIGLMCLLLIAMTRNDLVAGWRKSTPPDAPNEFIIDIQPDQRDAVTQYLGAHGL PGTVLSPMVRGRLTAINGKPVNPDSFKGDDAKRLVDREFNLSYTTELPDDNRLAAGTWYGDTKTPQISIEQGLAKLINVK PGDVLRFDVTGLQIDAPVTSVRKLDWGSFKVNFFVLMPLAALQDFPATFITSFHLPQEKQSIIDGLIAAYPNLTAIDTGP ILAQVQRVLQQVIGAVQFLFAFTLAAGVLVLYAALAGTRDERMRESALLRALGASHRQVRSVQIAEFVAVGALAGLMAAA GAQAIGYVLATRVFEFYLSFDPWLLPAGIAAGIACAGVGGWLSLRHVLARPALQSLRDA
Specific function: Unknown
COG id: COG3127
COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1786704, Length=828, Percent_Identity=31.0386473429952, Blast_Score=319, Evalue=4e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 91857; Mature: 91726
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTVRGSTARTASPSARRFGGMDLLRQSVRMTSRDWRAGELTMLLLALVLAVAALSSVG CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FLADRLHQGLERDARRMIAADFIVRADHPVDPQFAAQARALGLDTASTAIFPSMINSTGA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC QPVSRLAAIKAVSPGYPLRGALRIAPAPGAADYPARSIPPPGVVWVDQALLDALKLHVGD HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCC TVKVGNRNFTIGAVITRELDRGFSFVNFSPRLMLRVDDVLSTGLITYGSRVTYRLLVAGA EEEECCCCEEEHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECC DESVARFAQFAHERVDGGKMRGVALESLQDGQPQVRQTLDRASHFLTLVSLLTALLAAVA CHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAMAAHRYMRRHLDGCAVMRCLGVSQTTLRALFTLEFVGLGLIGGALGVALGYLGHLALL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWLGSLIDVALPYPTAWPALEGIAAGLVLLLGFALPPLLPLTRVPPVRVLRREWGEAGRT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AWAAYALGIVLFAALLIVAAGELKLGGIVAGGFAGGLLVFACIARLALWGAARLVRSERV HHHHHHHHHHHHHHHHHHHCCCEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAGIGWRYALASLERRSSASALQITALGIGLMCLLLIAMTRNDLVAGWRKSTPPDAPNEF CCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE IIDIQPDQRDAVTQYLGAHGLPGTVLSPMVRGRLTAINGKPVNPDSFKGDDAKRLVDREF EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHCCCC NLSYTTELPDDNRLAAGTWYGDTKTPQISIEQGLAKLINVKPGDVLRFDVTGLQIDAPVT CCEEEECCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCCCCCEEEEEECCEEECCCHH SVRKLDWGSFKVNFFVLMPLAALQDFPATFITSFHLPQEKQSIIDGLIAAYPNLTAIDTG HHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCC PILAQVQRVLQQVIGAVQFLFAFTLAAGVLVLYAALAGTRDERMRESALLRALGASHRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH RSVQIAEFVAVGALAGLMAAAGAQAIGYVLATRVFEFYLSFDPWLLPAGIAAGIACAGVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH GWLSLRHVLARPALQSLRDA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDTVRGSTARTASPSARRFGGMDLLRQSVRMTSRDWRAGELTMLLLALVLAVAALSSVG CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FLADRLHQGLERDARRMIAADFIVRADHPVDPQFAAQARALGLDTASTAIFPSMINSTGA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC QPVSRLAAIKAVSPGYPLRGALRIAPAPGAADYPARSIPPPGVVWVDQALLDALKLHVGD HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCC TVKVGNRNFTIGAVITRELDRGFSFVNFSPRLMLRVDDVLSTGLITYGSRVTYRLLVAGA EEEECCCCEEEHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECC DESVARFAQFAHERVDGGKMRGVALESLQDGQPQVRQTLDRASHFLTLVSLLTALLAAVA CHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAMAAHRYMRRHLDGCAVMRCLGVSQTTLRALFTLEFVGLGLIGGALGVALGYLGHLALL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWLGSLIDVALPYPTAWPALEGIAAGLVLLLGFALPPLLPLTRVPPVRVLRREWGEAGRT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AWAAYALGIVLFAALLIVAAGELKLGGIVAGGFAGGLLVFACIARLALWGAARLVRSERV HHHHHHHHHHHHHHHHHHHCCCEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAGIGWRYALASLERRSSASALQITALGIGLMCLLLIAMTRNDLVAGWRKSTPPDAPNEF CCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE IIDIQPDQRDAVTQYLGAHGLPGTVLSPMVRGRLTAINGKPVNPDSFKGDDAKRLVDREF EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHCCCC NLSYTTELPDDNRLAAGTWYGDTKTPQISIEQGLAKLINVKPGDVLRFDVTGLQIDAPVT CCEEEECCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCCCCCEEEEEECCEEECCCHH SVRKLDWGSFKVNFFVLMPLAALQDFPATFITSFHLPQEKQSIIDGLIAAYPNLTAIDTG HHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCC PILAQVQRVLQQVIGAVQFLFAFTLAAGVLVLYAALAGTRDERMRESALLRALGASHRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH RSVQIAEFVAVGALAGLMAAAGAQAIGYVLATRVFEFYLSFDPWLLPAGIAAGIACAGVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH GWLSLRHVLARPALQSLRDA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]