| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91782547
Identifier: 91782547
GI number: 91782547
Start: 1315723
End: 1316631
Strand: Direct
Name: 91782547
Synonym: Bxe_A3281
Alternate gene names: NA
Gene position: 1315723-1316631 (Clockwise)
Preceding gene: 91782546
Following gene: 91782548
Centisome position: 26.87
GC content: 64.36
Gene sequence:
>909_bases ATGAATGAGCCGCAGCGATTCACGGTGCGCCATGTCAGTGTCTACCGTTACTCGGAACCCGTGCGTTTCGGCGAGCATCG CATGATGTTTCGTCCGCGCGCCAGCCATGATTTGCGCCTCGTTACCAACCATTTGGTGATCACGCCTACGCCGTCGCGGC TTCATTGGCTGCACGACGTATTCGACAACTCGGTGGCGGTCGCGAGTTTCGCGGACAAGGCGAGCGAACTGCGCTTTGAC AGCGAAGTGACGCTCGAACACTTCGAAGCGCCAATGCCCGATTACGCACTCGAACCGTACGCGGTGAACTGGCCGTTCGC ATACACCAACGAGGAAGCGTCCGATCTCGTGAACGCGCGCAGCCGCCCGTATCCGGACAGCGACGTGGACGAGTGGGCGC GCCGTTTCGTGCCGACGGCCGGCGGCGCCGCAAGGAGCGGCAAGCGCGGCGCTGGCGCCGCCGGCGGCACGATGGCGCTG TTGCGCGCCATGACGCTCGAAATCAAGAGCACGTTTTTCTATGTGCGCCGCACGGAAAAAGGCGTGAACCGTCCCGGCGA AACCTTGCGCAGCCGCAGCGGCAGCTGCCGCGATTTCGCCGTGCTGATGATGGACGCGGTGCGCTCGCTCGGTCTTGCGG CACGCTTCGTGAGCGGCTATCTGTTCGTGCCCGAGCACGACGCGGCGCAAGGCGGCGGCGCGACGCACGCATGGCTGCAG ATCTATTTGCCGGGCGCGGGCTGGGTGGATTTCGATCCGACCAACAGTATCGTCGGCAACCGCCATCTGATTCGCGTGGC GGTGGCGTGGAACGCCTACCAGGCGCTGCCGTTGTGGGGCACGTGGCATGGCGCGCCGCATTCGTTCCGCGGTTTGCAGG TGGATGTGAGCGTGACTGAAGGCGAATGA
Upstream 100 bases:
>100_bases AAACCGCGCGGCGCGCTCTTCGCCTGCTGCGGCTGTGGCTTTTTTACAAGCGTGAACGCGATGGACAGGACGAACCCAGC GGTATTCATCGGGTGGTCAG
Downstream 100 bases:
>100_bases GCGCGAGTAAGTACGAGTAAGTGCGAACGGGGGCGCAGCGCCGGATAAGCGGCGCACCGACAGGGCGCCGAATGTCCCGG ATCGGCGAATCGAACGTGTT
Product: transglutaminase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNEPQRFTVRHVSVYRYSEPVRFGEHRMMFRPRASHDLRLVTNHLVITPTPSRLHWLHDVFDNSVAVASFADKASELRFD SEVTLEHFEAPMPDYALEPYAVNWPFAYTNEEASDLVNARSRPYPDSDVDEWARRFVPTAGGAARSGKRGAGAAGGTMAL LRAMTLEIKSTFFYVRRTEKGVNRPGETLRSRSGSCRDFAVLMMDAVRSLGLAARFVSGYLFVPEHDAAQGGGATHAWLQ IYLPGAGWVDFDPTNSIVGNRHLIRVAVAWNAYQALPLWGTWHGAPHSFRGLQVDVSVTEGE
Sequences:
>Translated_302_residues MNEPQRFTVRHVSVYRYSEPVRFGEHRMMFRPRASHDLRLVTNHLVITPTPSRLHWLHDVFDNSVAVASFADKASELRFD SEVTLEHFEAPMPDYALEPYAVNWPFAYTNEEASDLVNARSRPYPDSDVDEWARRFVPTAGGAARSGKRGAGAAGGTMAL LRAMTLEIKSTFFYVRRTEKGVNRPGETLRSRSGSCRDFAVLMMDAVRSLGLAARFVSGYLFVPEHDAAQGGGATHAWLQ IYLPGAGWVDFDPTNSIVGNRHLIRVAVAWNAYQALPLWGTWHGAPHSFRGLQVDVSVTEGE >Mature_302_residues MNEPQRFTVRHVSVYRYSEPVRFGEHRMMFRPRASHDLRLVTNHLVITPTPSRLHWLHDVFDNSVAVASFADKASELRFD SEVTLEHFEAPMPDYALEPYAVNWPFAYTNEEASDLVNARSRPYPDSDVDEWARRFVPTAGGAARSGKRGAGAAGGTMAL LRAMTLEIKSTFFYVRRTEKGVNRPGETLRSRSGSCRDFAVLMMDAVRSLGLAARFVSGYLFVPEHDAAQGGGATHAWLQ IYLPGAGWVDFDPTNSIVGNRHLIRVAVAWNAYQALPLWGTWHGAPHSFRGLQVDVSVTEGE
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 33765; Mature: 33765
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPQRFTVRHVSVYRYSEPVRFGEHRMMFRPRASHDLRLVTNHLVITPTPSRLHWLHDV CCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCEEEECCCHHHHHHHHH FDNSVAVASFADKASELRFDSEVTLEHFEAPMPDYALEPYAVNWPFAYTNEEASDLVNAR HCCCEEEHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEECCCEEECCCHHHHHHHHC SRPYPDSDVDEWARRFVPTAGGAARSGKRGAGAAGGTMALLRAMTLEIKSTFFYVRRTEK CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECHH GVNRPGETLRSRSGSCRDFAVLMMDAVRSLGLAARFVSGYLFVPEHDAAQGGGATHAWLQ CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEE IYLPGAGWVDFDPTNSIVGNRHLIRVAVAWNAYQALPLWGTWHGAPHSFRGLQVDVSVTE EEECCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECEEEECCCCCCCCCCCEEEEEEEEC GE CC >Mature Secondary Structure MNEPQRFTVRHVSVYRYSEPVRFGEHRMMFRPRASHDLRLVTNHLVITPTPSRLHWLHDV CCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCEEEECCCHHHHHHHHH FDNSVAVASFADKASELRFDSEVTLEHFEAPMPDYALEPYAVNWPFAYTNEEASDLVNAR HCCCEEEHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEECCCEEECCCHHHHHHHHC SRPYPDSDVDEWARRFVPTAGGAARSGKRGAGAAGGTMALLRAMTLEIKSTFFYVRRTEK CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECHH GVNRPGETLRSRSGSCRDFAVLMMDAVRSLGLAARFVSGYLFVPEHDAAQGGGATHAWLQ CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEE IYLPGAGWVDFDPTNSIVGNRHLIRVAVAWNAYQALPLWGTWHGAPHSFRGLQVDVSVTE EEECCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECEEEECCCCCCCCCCCEEEEEEEEC GE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]