| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is rhlE [H]
Identifier: 91782534
GI number: 91782534
Start: 1296551
End: 1298026
Strand: Direct
Name: rhlE [H]
Synonym: Bxe_A3295
Alternate gene names: 91782534
Gene position: 1296551-1298026 (Clockwise)
Preceding gene: 91782533
Following gene: 91782537
Centisome position: 26.48
GC content: 65.99
Gene sequence:
>1476_bases ATGTCCGACACACCCGTCACGCCCAGCACTTCGACTTTTGATCAATTCGGCCTCGCGCCCGACATCCTGAAAGCCGTCAA AGAGTCGGGCTACACCATCCCCACGCCGATCCAGGAGCAGGCGATTCCCGTCGTGCTGGCCGGCCGTGACATGATGGGCG CCGCGCAAACCGGCACCGGCAAGACCGCGAGCTTCTCGCTGCCGATCATCCAGCGCCTGCTGCCGCAGGCGAGCACGAGC GCTTCGCCCGCCCGCCATCCGGTGCGCGCGCTGATCCTCACGCCGACCCGCGAGTTGGCCGACCAGGTCGCCGCGAACGT GCAGGCCTATGCGAAGCACACGGCGCTGCGCAGCGCCGTGGTGTTCGGCGGGGTGGATATGAATCCGCAATCCGAGCAAC TGCGCCGCGGCGTCGAGATTCTGATCGCCACGCCGGGCCGCCTGCTCGATCATGTGCAGCAGAAAACCGCCAACCTGGGC CAGGTGCAGATTCTCGTGCTCGACGAAGCCGACCGCATGCTCGACATGGGTTTCCTGCCGGATCTGCAGCGCATTCTGAA CCTGCTGCCGAAAGAACGTCAGACGCTGCTGTTTTCGGCCACCTTCTCGGGCGAAATCAAGAAGCTCGCCGCCACCTATC TGCGCGACCCGCAGACTATCGAAGTCGCGCGCAGCAATTCGACTGCGACCAACGTGAGGCAGATCGTCTATGAAGTCGCC GAGGGCGACAAGACCGGCGCGGTCGTGCAACTGATTCGCGAGCGCGGCCTCAAGCAGGTTATCGTGTTCTGCAACAGCAA GATCGGCGCGAGCCGTCTCTCGCGCAGCCTGGAGCGCGACGGCGTGATCGCGACCGCGATTCACGGCGACCGCTCGCAGA ATGAACGGATGCAGGCGCTCGACGCGTTCAAGCGCGGCGAGATCGAAGCGCTGGTGGCAACAGATGTCGCCGCGCGCGGC CTGGATATCGCCGAACTGCCGGCGGTGATCAACTTCGATCTGCCCTTCAACGCGGAAGACTACGTGCATCGGATCGGCCG TACCGGCCGCGCGGGCGCCTCGGGCGACGCGTTGTCGCTGTGCAGCCCGAACGAGCGCAAGCAGCTTGCCGATATCGAAA AGCTGATCAAGCGCCCGCTGGAGGTGCAGCGCCTGACGGTGGAAGCGCCGGTGCGGCATCACCATGAAGAGCGCGCGCCG CGGCGCGAGCGTAGCAGCGAGGGGCGCGAAGATCGGGGCGGCCGCCGCCGCTCGGGCGCTTCGTCGTCGGGTTCGTTCGA CCGGCCGCATCATCATCGCGCGCAGCCTGTGGATGATTTCTTCCTGAAGCCTTATGAGCCGTCGCCTGCTTCGGTGCGCA AGGTCGAGGAGGCCGACGCGGCTTCGGCCGCGCCGCAGAAGCCGGCTTCCAAGCAGCCGTTGGCAGCGCTGTTGGGCGGG TTCGGCATGCCGAGAAAGTCGCCTTCGTCTTCCTGA
Upstream 100 bases:
>100_bases CCCGTGCGGAACGCCGTGGCTCCGCCTTCATCACAATGCCCTCTGCGGTTCCGACCGCTGCCGCGCGCACGCGCCAAGCG CATTTTTAGCGAAAGCCACC
Downstream 100 bases:
>100_bases TGGGGGTGTGTCGGCGCAGCCAGTCTGCGCGACGCACGCCGCGCACGGCGAGATCGCTTTCAGACGCGAATCGCGTTTAA TCCGCTGCTAATCCCATTCG
Product: putative ATP-dependent RNA helicase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQRLLPQASTS ASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQKTANLG QVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVA EGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLSRSLERDGVIATAIHGDRSQNERMQALDAFKRGEIEALVATDVAARG LDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPLEVQRLTVEAPVRHHHEERAP RRERSSEGREDRGGRRRSGASSSGSFDRPHHHRAQPVDDFFLKPYEPSPASVRKVEEADAASAAPQKPASKQPLAALLGG FGMPRKSPSSS
Sequences:
>Translated_491_residues MSDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQRLLPQASTS ASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQKTANLG QVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVA EGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLSRSLERDGVIATAIHGDRSQNERMQALDAFKRGEIEALVATDVAARG LDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPLEVQRLTVEAPVRHHHEERAP RRERSSEGREDRGGRRRSGASSSGSFDRPHHHRAQPVDDFFLKPYEPSPASVRKVEEADAASAAPQKPASKQPLAALLGG FGMPRKSPSSS >Mature_490_residues SDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQRLLPQASTSA SPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQKTANLGQ VQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVAE GDKTGAVVQLIRERGLKQVIVFCNSKIGASRLSRSLERDGVIATAIHGDRSQNERMQALDAFKRGEIEALVATDVAARGL DIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPLEVQRLTVEAPVRHHHEERAPR RERSSEGREDRGGRRRSGASSSGSFDRPHHHRAQPVDDFFLKPYEPSPASVRKVEEADAASAAPQKPASKQPLAALLGGF GMPRKSPSSS
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI262118318, Length=370, Percent_Identity=40.8108108108108, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI13518015, Length=370, Percent_Identity=40.8108108108108, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI148613856, Length=360, Percent_Identity=42.5, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI38201710, Length=360, Percent_Identity=42.5, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI262231852, Length=370, Percent_Identity=40.8108108108108, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI216548263, Length=370, Percent_Identity=40.8108108108108, Blast_Score=286, Evalue=3e-77, Organism=Homo sapiens, GI301171467, Length=419, Percent_Identity=40.3341288782816, Blast_Score=285, Evalue=9e-77, Organism=Homo sapiens, GI222352149, Length=377, Percent_Identity=40.5835543766578, Blast_Score=284, Evalue=2e-76, Organism=Homo sapiens, GI4758138, Length=370, Percent_Identity=41.0810810810811, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI87196351, Length=409, Percent_Identity=40.8312958435208, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI301171475, Length=409, Percent_Identity=40.8312958435208, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI45446747, Length=365, Percent_Identity=40.8219178082192, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI45446743, Length=365, Percent_Identity=40.8219178082192, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI169881239, Length=418, Percent_Identity=39.4736842105263, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI13514809, Length=418, Percent_Identity=39.4736842105263, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=38.4816753926702, Blast_Score=275, Evalue=6e-74, Organism=Homo sapiens, GI20149629, Length=415, Percent_Identity=37.8313253012048, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=40.8970976253298, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI21071032, Length=378, Percent_Identity=39.4179894179894, Blast_Score=269, Evalue=3e-72, Organism=Homo sapiens, GI188035877, Length=377, Percent_Identity=39.2572944297082, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI55749865, Length=412, Percent_Identity=35.9223300970874, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI41327773, Length=372, Percent_Identity=38.9784946236559, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI31542656, Length=377, Percent_Identity=38.1962864721485, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI41327776, Length=415, Percent_Identity=35.9036144578313, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=34.3163538873995, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=34.9862258953168, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI164419743, Length=374, Percent_Identity=36.6310160427808, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI51094101, Length=374, Percent_Identity=36.6310160427808, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI13514831, Length=382, Percent_Identity=36.3874345549738, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI50659095, Length=397, Percent_Identity=35.0125944584383, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI13129006, Length=375, Percent_Identity=36, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI38327634, Length=356, Percent_Identity=35.9550561797753, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI21040371, Length=373, Percent_Identity=31.3672922252011, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI4758112, Length=373, Percent_Identity=31.6353887399464, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI18375623, Length=373, Percent_Identity=31.6353887399464, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=34.6456692913386, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=32.4120603015075, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI38569505, Length=383, Percent_Identity=31.5926892950392, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI38569503, Length=383, Percent_Identity=31.5926892950392, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI4503529, Length=378, Percent_Identity=31.7460317460317, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI17505907, Length=411, Percent_Identity=32.1167883211679, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=31.1827956989247, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI8922886, Length=368, Percent_Identity=33.4239130434783, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI6005743, Length=368, Percent_Identity=32.8804347826087, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=29.6195652173913, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI164419732, Length=395, Percent_Identity=33.1645569620253, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI62241022, Length=347, Percent_Identity=33.1412103746398, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI9966805, Length=340, Percent_Identity=33.5294117647059, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=32.8402366863905, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI256773275, Length=373, Percent_Identity=32.9758713136729, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI62241024, Length=326, Percent_Identity=32.5153374233129, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI154759257, Length=415, Percent_Identity=30.3614457831325, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI20336298, Length=270, Percent_Identity=37.037037037037, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI284005309, Length=358, Percent_Identity=23.463687150838, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1787016, Length=376, Percent_Identity=56.1170212765958, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI87082221, Length=368, Percent_Identity=40.7608695652174, Blast_Score=288, Evalue=5e-79, Organism=Escherichia coli, GI1790214, Length=424, Percent_Identity=38.9150943396226, Blast_Score=282, Evalue=4e-77, Organism=Escherichia coli, GI1787605, Length=367, Percent_Identity=39.7820163487738, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1788930, Length=377, Percent_Identity=38.4615384615385, Blast_Score=238, Evalue=9e-64, Organism=Escherichia coli, GI48994977, Length=370, Percent_Identity=27.5675675675676, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787942, Length=450, Percent_Identity=25.7777777777778, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32565321, Length=407, Percent_Identity=38.5749385749386, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI17510307, Length=390, Percent_Identity=42.3076923076923, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI71995514, Length=390, Percent_Identity=42.3076923076923, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17510309, Length=390, Percent_Identity=42.3076923076923, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17555296, Length=373, Percent_Identity=39.4101876675603, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI115533224, Length=408, Percent_Identity=38.2352941176471, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI71995718, Length=381, Percent_Identity=41.4698162729659, Blast_Score=262, Evalue=3e-70, Organism=Caenorhabditis elegans, GI17510559, Length=400, Percent_Identity=37, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=36.3143631436314, Blast_Score=254, Evalue=1e-67, Organism=Caenorhabditis elegans, GI86570094, Length=366, Percent_Identity=39.6174863387978, Blast_Score=251, Evalue=8e-67, Organism=Caenorhabditis elegans, GI17507945, Length=379, Percent_Identity=37.467018469657, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17537549, Length=387, Percent_Identity=35.1421188630491, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=35.4395604395604, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=35.1648351648352, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=38.3378016085791, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=36.8421052631579, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17507881, Length=403, Percent_Identity=36.4764267990074, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=38.031914893617, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17552642, Length=381, Percent_Identity=36.2204724409449, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71999646, Length=370, Percent_Identity=35.1351351351351, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71999644, Length=370, Percent_Identity=35.1351351351351, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=31.8059299191375, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI115532546, Length=392, Percent_Identity=33.1632653061224, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI115532548, Length=385, Percent_Identity=33.5064935064935, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI71982858, Length=375, Percent_Identity=30.4, Blast_Score=198, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17505370, Length=353, Percent_Identity=35.9773371104816, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17508543, Length=378, Percent_Identity=32.5396825396825, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=33.6134453781513, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=32.4468085106383, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71990816, Length=377, Percent_Identity=32.0954907161804, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI17556951, Length=354, Percent_Identity=33.6158192090396, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=33.4164588528678, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17536099, Length=402, Percent_Identity=30.5970149253731, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17536101, Length=402, Percent_Identity=30.5970149253731, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=30.1745635910224, Blast_Score=176, Evalue=4e-44, Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=26.491646778043, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=33.4210526315789, Blast_Score=164, Evalue=9e-41, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=25.6983240223464, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=29.8192771084337, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71982862, Length=214, Percent_Identity=31.3084112149533, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71997889, Length=443, Percent_Identity=26.1851015801354, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148205, Length=334, Percent_Identity=24.251497005988, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17557982, Length=381, Percent_Identity=24.4094488188976, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=40.8163265306122, Blast_Score=93, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6321856, Length=380, Percent_Identity=41.8421052631579, Blast_Score=290, Evalue=3e-79, Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=43.7325905292479, Blast_Score=289, Evalue=6e-79, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=40.5994550408719, Blast_Score=274, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6324778, Length=350, Percent_Identity=42.2857142857143, Blast_Score=271, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=39.6694214876033, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6320041, Length=373, Percent_Identity=35.9249329758713, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6323021, Length=357, Percent_Identity=38.655462184874, Blast_Score=246, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=32.972972972973, Blast_Score=229, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6322427, Length=393, Percent_Identity=35.3689567430025, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=366, Percent_Identity=37.1584699453552, Blast_Score=221, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=387, Percent_Identity=34.8837209302326, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320173, Length=424, Percent_Identity=30.8962264150943, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=35.2617079889807, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6319714, Length=391, Percent_Identity=33.5038363171356, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=33.2432432432432, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=33.2432432432432, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=372, Percent_Identity=32.5268817204301, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321963, Length=422, Percent_Identity=32.9383886255924, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6321111, Length=399, Percent_Identity=29.8245614035088, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=28.743961352657, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=30.1932367149758, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=353, Percent_Identity=30.8781869688385, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=379, Percent_Identity=31.1345646437995, Blast_Score=153, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=418, Percent_Identity=28.4688995215311, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=445, Percent_Identity=25.6179775280899, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6321374, Length=470, Percent_Identity=24.468085106383, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323844, Length=350, Percent_Identity=22.2857142857143, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24584399, Length=361, Percent_Identity=42.382271468144, Blast_Score=289, Evalue=2e-78, Organism=Drosophila melanogaster, GI17985987, Length=389, Percent_Identity=41.6452442159383, Blast_Score=287, Evalue=1e-77, Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=38.265306122449, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24585582, Length=420, Percent_Identity=38.3333333333333, Blast_Score=284, Evalue=1e-76, Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=40.053050397878, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI21355075, Length=398, Percent_Identity=38.9447236180905, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI28574962, Length=375, Percent_Identity=39.4666666666667, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI21356161, Length=368, Percent_Identity=41.8478260869565, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI24662330, Length=366, Percent_Identity=40.1639344262295, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=40.0552486187845, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=40.0552486187845, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=40.0552486187845, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=40.0552486187845, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=40.0552486187845, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=40.0552486187845, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=40.0552486187845, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI17977678, Length=381, Percent_Identity=39.1076115485564, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI24642151, Length=389, Percent_Identity=37.0179948586118, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=36.1878453038674, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=36.1878453038674, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24645031, Length=373, Percent_Identity=33.5120643431635, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI17136814, Length=404, Percent_Identity=37.1287128712871, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI281365720, Length=319, Percent_Identity=38.871473354232, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=34.2318059299191, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=34.2318059299191, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=34.2318059299191, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=34.2318059299191, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=37.3937677053824, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=37.3937677053824, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI28575014, Length=373, Percent_Identity=32.4396782841823, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24581954, Length=375, Percent_Identity=31.7333333333333, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24581952, Length=375, Percent_Identity=31.7333333333333, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24581956, Length=375, Percent_Identity=31.7333333333333, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24666101, Length=371, Percent_Identity=34.2318059299191, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=33.0687830687831, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI21355559, Length=431, Percent_Identity=32.7146171693735, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI20130173, Length=453, Percent_Identity=28.9183222958057, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17647335, Length=376, Percent_Identity=29.2553191489362, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24643725, Length=402, Percent_Identity=29.1044776119403, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI19920478, Length=388, Percent_Identity=32.2164948453608, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=31.5315315315315, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=29.6296296296296, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI17136666, Length=444, Percent_Identity=27.2522522522523, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI28571338, Length=200, Percent_Identity=34.5, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI18859659, Length=200, Percent_Identity=34.5, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24646066, Length=333, Percent_Identity=23.1231231231231, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 53386; Mature: 53255
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTG CCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCC KTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAV CCEEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP HCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCH DLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVA HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH EGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLSRSLERDGVIATAIHGDRSQNERMQAL CCCCHHHHHHHHHHCCHHEEHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSL HHHHCCCCEEHHHHHHHHCCCCHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEC CSPNERKQLADIEKLIKRPLEVQRLTVEAPVRHHHEERAPRRERSSEGREDRGGRRRSGA CCCCHHHHHHHHHHHHHCCHHHHHEEECCHHHHHHHHHCHHHHHHCCCCHHCCCCCCCCC SSSGSFDRPHHHRAQPVDDFFLKPYEPSPASVRKVEEADAASAAPQKPASKQPLAALLGG CCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC FGMPRKSPSSS CCCCCCCCCCC >Mature Secondary Structure SDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTG CCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCC KTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAV CCEEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP HCCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCH DLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVA HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH EGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLSRSLERDGVIATAIHGDRSQNERMQAL CCCCHHHHHHHHHHCCHHEEHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSL HHHHCCCCEEHHHHHHHHCCCCHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEC CSPNERKQLADIEKLIKRPLEVQRLTVEAPVRHHHEERAPRRERSSEGREDRGGRRRSGA CCCCHHHHHHHHHHHHHCCHHHHHEEECCHHHHHHHHHCHHHHHHCCCCHHCCCCCCCCC SSSGSFDRPHHHRAQPVDDFFLKPYEPSPASVRKVEEADAASAAPQKPASKQPLAALLGG CCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC FGMPRKSPSSS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]