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The map label for this gene is rfaC [H]

Identifier: 91782410

GI number: 91782410

Start: 1150610

End: 1151614

Strand: Direct

Name: rfaC [H]

Synonym: Bxe_A3421

Alternate gene names: 91782410

Gene position: 1150610-1151614 (Clockwise)

Preceding gene: 91782409

Following gene: 91782413

Centisome position: 23.5

GC content: 64.38

Gene sequence:

>1005_bases
ATGAAGCGAGTCCTTATCGTCAAGGTCACTTCACTCGGCGATATCGTGCAGGCTCTGCCGGTCGTCGCCGATATCAAACG
CGCGTTTCCCGGCGTTCAGGTGGATTGGGCCGCTGACGAAGCATTCGCCGAAGTGGTGCAATGGAGCGAGAACGTGGACC
GCGTGCTGTGCGCGCCGCTGCGCCGCTTCAAGAAAGCGCGCCGCTGGGCCGATTTCAAATCGATCTGGGCGTCGATCGCC
GAACTGCGCGCCTACCGCTACGATTTCATCATCGATATTCAGGGGGTGTACAAGAGCGCGATCATCGCGTTTCTGGCACG
CTCGTCGCGGCGCATCGGCTATCAGGCTCCGGATCTCGGCGAGCGCGGCGCCGCATTCGCTTACACCGGGCGGTTCGGCC
GGCGTCCGCAGTGCAATGCATGGCACGGCATGCGGATCAACGTAGGCGAGGCGCTCGGCTACCAGATAGAAGGTCCGGCC
GTGTTCCAGCTGCGGCTGCCGGAGACCACCGGGCTGCCGTTCGTTGCGAATGGCGCACCGGTCGCGGCGTTTTTTCACGC
CACCTCGAAAGACGACAAGAAGTGGCCGTTGACTCATTGGGTGGCGGTCGGTCGCGAGTTGACGCAGCGCGGTTTTCAGC
TGGTGCTGCCGTGGGGCTCGGAAGGCGAGCGGATCGAAGCGGAGCAGATCGCGGCACAACTGCCGGGCGCGACCGTGCTG
CCGAAAATGAGCGTGACCGAAATCGCGCAGATGATCGACGCGTGCGCCCTCGTGATCGGCACGGACACCGGCTTCGTCCA
TCTCGCGCACGCGCTGCAAAAGCGCGTGGTGATGATTTTCGTGGCGACGCCGCCGTCGCATTACGGCATCGAATCGCCGT
TCCGCTCCATCTCGATCGGTGACGGCGAGTCAGTGCCGTCCGTCAGCGCCGCGCTCGAGGCGATCGACTACGTTCATACC
GAGCCGCATGCGGTGGCCGTGCAACACGGCGCGGCCACGGCCTGA

Upstream 100 bases:

>100_bases
CGCCGTATTAATGCCCGAAGTGCACGCTGCGCGGTTCGGCAGAGGCCATTGCATTCGTCGGCTAAAATGTTCGGATGTTC
GAACAACTCACAGGTCCTCA

Downstream 100 bases:

>100_bases
GCGACGCGGCTCTCGCCGTCTTTCTTGCGCAATGCGCAATCGTTTGCCCGAAAAGAAAAGAGGCGTGACGTGCAGGCCGC
CCGATCAAACGGGCGCTGCC

Product: putative lipopolysaccharide heptosyltransferase-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRVLIVKVTSLGDIVQALPVVADIKRAFPGVQVDWAADEAFAEVVQWSENVDRVLCAPLRRFKKARRWADFKSIWASIA
ELRAYRYDFIIDIQGVYKSAIIAFLARSSRRIGYQAPDLGERGAAFAYTGRFGRRPQCNAWHGMRINVGEALGYQIEGPA
VFQLRLPETTGLPFVANGAPVAAFFHATSKDDKKWPLTHWVAVGRELTQRGFQLVLPWGSEGERIEAEQIAAQLPGATVL
PKMSVTEIAQMIDACALVIGTDTGFVHLAHALQKRVVMIFVATPPSHYGIESPFRSISIGDGESVPSVSAALEAIDYVHT
EPHAVAVQHGAATA

Sequences:

>Translated_334_residues
MKRVLIVKVTSLGDIVQALPVVADIKRAFPGVQVDWAADEAFAEVVQWSENVDRVLCAPLRRFKKARRWADFKSIWASIA
ELRAYRYDFIIDIQGVYKSAIIAFLARSSRRIGYQAPDLGERGAAFAYTGRFGRRPQCNAWHGMRINVGEALGYQIEGPA
VFQLRLPETTGLPFVANGAPVAAFFHATSKDDKKWPLTHWVAVGRELTQRGFQLVLPWGSEGERIEAEQIAAQLPGATVL
PKMSVTEIAQMIDACALVIGTDTGFVHLAHALQKRVVMIFVATPPSHYGIESPFRSISIGDGESVPSVSAALEAIDYVHT
EPHAVAVQHGAATA
>Mature_334_residues
MKRVLIVKVTSLGDIVQALPVVADIKRAFPGVQVDWAADEAFAEVVQWSENVDRVLCAPLRRFKKARRWADFKSIWASIA
ELRAYRYDFIIDIQGVYKSAIIAFLARSSRRIGYQAPDLGERGAAFAYTGRFGRRPQCNAWHGMRINVGEALGYQIEGPA
VFQLRLPETTGLPFVANGAPVAAFFHATSKDDKKWPLTHWVAVGRELTQRGFQLVLPWGSEGERIEAEQIAAQLPGATVL
PKMSVTEIAQMIDACALVIGTDTGFVHLAHALQKRVVMIFVATPPSHYGIESPFRSISIGDGESVPSVSAALEAIDYVHT
EPHAVAVQHGAATA

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=292, Percent_Identity=33.9041095890411, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36602; Mature: 36602

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLIVKVTSLGDIVQALPVVADIKRAFPGVQVDWAADEAFAEVVQWSENVDRVLCAPL
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCHHHHHHHHH
RRFKKARRWADFKSIWASIAELRAYRYDFIIDIQGVYKSAIIAFLARSSRRIGYQAPDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCC
ERGAAFAYTGRFGRRPQCNAWHGMRINVGEALGYQIEGPAVFQLRLPETTGLPFVANGAP
CCCCEEEEECCCCCCCCCCCCCCEEEECCHHCCEEECCCEEEEEECCCCCCCCEEECCCC
VAAFFHATSKDDKKWPLTHWVAVGRELTQRGFQLVLPWGSEGERIEAEQIAAQLPGATVL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCCC
PKMSVTEIAQMIDACALVIGTDTGFVHLAHALQKRVVMIFVATPPSHYGIESPFRSISIG
CCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEECC
DGESVPSVSAALEAIDYVHTEPHAVAVQHGAATA
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKRVLIVKVTSLGDIVQALPVVADIKRAFPGVQVDWAADEAFAEVVQWSENVDRVLCAPL
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCHHHHHHHHH
RRFKKARRWADFKSIWASIAELRAYRYDFIIDIQGVYKSAIIAFLARSSRRIGYQAPDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCC
ERGAAFAYTGRFGRRPQCNAWHGMRINVGEALGYQIEGPAVFQLRLPETTGLPFVANGAP
CCCCEEEEECCCCCCCCCCCCCCEEEECCHHCCEEECCCEEEEEECCCCCCCCEEECCCC
VAAFFHATSKDDKKWPLTHWVAVGRELTQRGFQLVLPWGSEGERIEAEQIAAQLPGATVL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCCC
PKMSVTEIAQMIDACALVIGTDTGFVHLAHALQKRVVMIFVATPPSHYGIESPFRSISIG
CCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEECC
DGESVPSVSAALEAIDYVHTEPHAVAVQHGAATA
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]