| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yxlA [H]
Identifier: 91782393
GI number: 91782393
Start: 1133733
End: 1135049
Strand: Reverse
Name: yxlA [H]
Synonym: Bxe_A3437
Alternate gene names: 91782393
Gene position: 1135049-1133733 (Counterclockwise)
Preceding gene: 91782402
Following gene: 91782391
Centisome position: 23.18
GC content: 68.41
Gene sequence:
>1317_bases ATGGCACAAGATCCACTCGCCGGCGACGCCGGTTCCACTTACGCACCGCTCACGCCGGTGCCCGACGCGCGACGCGCGTT CCGCACCGGCGACGCGTTCGCGCTCTGGTTCTCGCTCGGCATCGGCCTGCTGGTCGCGCAGGCGGGTGCGCTGCTGGTGC CGGGACTGTCGCTGCCGCATGCGTTGCTGGCCATCGTTATCGGCAGCGTGATCGGCGTGGTGCTGCTCGCTCTCGCGGGC GTGATCGGCACGGATACGGGGCTTGCGGCGATGTCGTCGTTGCGGCCGACGCTCGGCGTGCGCGGCGCATCGGTGCCCGC CGTGCTGAACGCGGTGCAACTGGTCGGCTGGGGCTCGTTCGAGGTAATCGTGATGCGCGATTCCGCCGACGCCCTCGCCA AACAGGCCTTCGGCCTCTCCATGCCGCTCATCTGGACGGTGATCTTCGGCCTGCTCGCGACGCTGCTGGCGATCAGCGGG CCGCTCTCGTTCGTGCGGCGCTTTCTGCGCACGTGGGGCATCTGGCTGTTGCTCGCGGGCGCGGCGTGGCTGACATGGAA CCTGCTCGCAAAACACGATCTCGCTGCGCTGATGCAGCGTCCGGGCACGGGCGAGATGTCGTTCGGCGGCGCCATCGATC TGGTGGTCGCCATGCCGCTGTCGTGGCTGCCGCTGATCGCCGATTACACCCGCTTCGGCCGGCGTGCCGGTGAGACGTTC CGCGGCACGCTGCTCGGCTACGGCATCGCCAACATCTGGTTTTACGCGCTCGGCGCGGTCTACGGCCTCGCGGCAGGCGG CGGCGACGCGCTGCTGACGAGCGCGCTGGCGCAAGCCGGCGGCGGTCTCGCCCTGCTGCTGATCCTGATCGACGAAGTCG ACAACGCGTTCGCCGACATTCACTCCGCCGCGGTATCGACGGGCACGTTCTGGACGCGCGGCAGCGTGCCCATCCTGTCG GCGGCATTCGGCGCGCTGTGCACGCTGATCGCGCTGCTCGTGCCGATGGCGAAGTATCAGAACTTCCTGCTGCTGATCGG CTCGGTGTTCGCGCCGCTGTTCGGCGTGGTGCTGGTGGATCACTTCATCGTGCGCAAGCGCCGTATCGAAGCCGCGGTTC TCGCCGACGTACGCGGCCGTTACGGCTTCTCGGGCGGCTGGCATCTGAGCGCGTTTCTCGCGTGGGCCATCGGCATCGTC GCCTATCAGGCGATCAATCAATGGCTGCCGAATCTCGGCGCGACGCTGCCCGCGCTGGTGATCGGCGCGGTGTGCTATCT GGCGTTCGTGTCGGCACGCAAGACGGCGTATGCCTGA
Upstream 100 bases:
>100_bases CCGGCAAAGTACGACGCAACGGGGCACGTAATCGAAGCCCCAGCCGCGGACATGACAGCAGATGCAACATCGCAGGCAAC ACCAACAGGGACAAGACCAG
Downstream 100 bases:
>100_bases TTGAACTAACTCCACGGTTAAACGGAAAGGCCTGCAATTGCAGGCCTTTCCGTTTGCGCGGTCACTTCAGCGGGTGGACG CCCGATACTCGACGCCCGGC
Product: nucleobase/cation symporter, (NCS1) family
Products: Proton [Cytoplasm]; cytosine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MAQDPLAGDAGSTYAPLTPVPDARRAFRTGDAFALWFSLGIGLLVAQAGALLVPGLSLPHALLAIVIGSVIGVVLLALAG VIGTDTGLAAMSSLRPTLGVRGASVPAVLNAVQLVGWGSFEVIVMRDSADALAKQAFGLSMPLIWTVIFGLLATLLAISG PLSFVRRFLRTWGIWLLLAGAAWLTWNLLAKHDLAALMQRPGTGEMSFGGAIDLVVAMPLSWLPLIADYTRFGRRAGETF RGTLLGYGIANIWFYALGAVYGLAAGGGDALLTSALAQAGGGLALLLILIDEVDNAFADIHSAAVSTGTFWTRGSVPILS AAFGALCTLIALLVPMAKYQNFLLLIGSVFAPLFGVVLVDHFIVRKRRIEAAVLADVRGRYGFSGGWHLSAFLAWAIGIV AYQAINQWLPNLGATLPALVIGAVCYLAFVSARKTAYA
Sequences:
>Translated_438_residues MAQDPLAGDAGSTYAPLTPVPDARRAFRTGDAFALWFSLGIGLLVAQAGALLVPGLSLPHALLAIVIGSVIGVVLLALAG VIGTDTGLAAMSSLRPTLGVRGASVPAVLNAVQLVGWGSFEVIVMRDSADALAKQAFGLSMPLIWTVIFGLLATLLAISG PLSFVRRFLRTWGIWLLLAGAAWLTWNLLAKHDLAALMQRPGTGEMSFGGAIDLVVAMPLSWLPLIADYTRFGRRAGETF RGTLLGYGIANIWFYALGAVYGLAAGGGDALLTSALAQAGGGLALLLILIDEVDNAFADIHSAAVSTGTFWTRGSVPILS AAFGALCTLIALLVPMAKYQNFLLLIGSVFAPLFGVVLVDHFIVRKRRIEAAVLADVRGRYGFSGGWHLSAFLAWAIGIV AYQAINQWLPNLGATLPALVIGAVCYLAFVSARKTAYA >Mature_437_residues AQDPLAGDAGSTYAPLTPVPDARRAFRTGDAFALWFSLGIGLLVAQAGALLVPGLSLPHALLAIVIGSVIGVVLLALAGV IGTDTGLAAMSSLRPTLGVRGASVPAVLNAVQLVGWGSFEVIVMRDSADALAKQAFGLSMPLIWTVIFGLLATLLAISGP LSFVRRFLRTWGIWLLLAGAAWLTWNLLAKHDLAALMQRPGTGEMSFGGAIDLVVAMPLSWLPLIADYTRFGRRAGETFR GTLLGYGIANIWFYALGAVYGLAAGGGDALLTSALAQAGGGLALLLILIDEVDNAFADIHSAAVSTGTFWTRGSVPILSA AFGALCTLIALLVPMAKYQNFLLLIGSVFAPLFGVVLVDHFIVRKRRIEAAVLADVRGRYGFSGGWHLSAFLAWAIGIVA YQAINQWLPNLGATLPALVIGAVCYLAFVSARKTAYA
Specific function: Required For Cytosine Transport Into The Cell. [C]
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 45830; Mature: 45698
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDPLAGDAGSTYAPLTPVPDARRAFRTGDAFALWFSLGIGLLVAQAGALLVPGLSLPH CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCHHH ALLAIVIGSVIGVVLLALAGVIGTDTGLAAMSSLRPTLGVRGASVPAVLNAVQLVGWGSF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCE EVIVMRDSADALAKQAFGLSMPLIWTVIFGLLATLLAISGPLSFVRRFLRTWGIWLLLAG EEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAWLTWNLLAKHDLAALMQRPGTGEMSFGGAIDLVVAMPLSWLPLIADYTRFGRRAGETF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RGTLLGYGIANIWFYALGAVYGLAAGGGDALLTSALAQAGGGLALLLILIDEVDNAFADI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH HSAAVSTGTFWTRGSVPILSAAFGALCTLIALLVPMAKYQNFLLLIGSVFAPLFGVVLVD HHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFIVRKRRIEAAVLADVRGRYGFSGGWHLSAFLAWAIGIVAYQAINQWLPNLGATLPALV HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IGAVCYLAFVSARKTAYA HHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQDPLAGDAGSTYAPLTPVPDARRAFRTGDAFALWFSLGIGLLVAQAGALLVPGLSLPH CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCHHH ALLAIVIGSVIGVVLLALAGVIGTDTGLAAMSSLRPTLGVRGASVPAVLNAVQLVGWGSF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCE EVIVMRDSADALAKQAFGLSMPLIWTVIFGLLATLLAISGPLSFVRRFLRTWGIWLLLAG EEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAWLTWNLLAKHDLAALMQRPGTGEMSFGGAIDLVVAMPLSWLPLIADYTRFGRRAGETF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RGTLLGYGIANIWFYALGAVYGLAAGGGDALLTSALAQAGGGLALLLILIDEVDNAFADI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH HSAAVSTGTFWTRGSVPILSAAFGALCTLIALLVPMAKYQNFLLLIGSVFAPLFGVVLVD HHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFIVRKRRIEAAVLADVRGRYGFSGGWHLSAFLAWAIGIVAYQAINQWLPNLGATLPALV HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IGAVCYLAFVSARKTAYA HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; cytosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + cytosine [Periplasm] = Proton [Cytoplasm] + cytosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]