| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is trxB [H]
Identifier: 91782388
GI number: 91782388
Start: 1126876
End: 1127877
Strand: Reverse
Name: trxB [H]
Synonym: Bxe_A3442
Alternate gene names: 91782388
Gene position: 1127877-1126876 (Counterclockwise)
Preceding gene: 91782391
Following gene: 91782387
Centisome position: 23.04
GC content: 64.17
Gene sequence:
>1002_bases ATGCCCGCAACTTCCACGAAACACGCCAAGGTTCTGATTCTCGGTTCCGGTCCCGCCGGCTACACGGCAGCGGTCTACGC GGCGCGCGCAAACCTCGCGCCGGTGCTCGTCACGGGCCTCGCCCAGGGCGGCCAGCTCATGACCACGACCGACGTCGAAA ACTGGCCTGCCGACGCCAACGGCGTGCAAGGCCCGGAACTGATGGCGCGCTTTCTGGAGCACGCCGAGCGCTTCAACACC GAAATCATTTTCGACCACATTCACACGGCAAAGCTGGACGAGAAGCCGATCCGCCTGATCGGCGACTCGGGCGAATACAC CTGCGACTCGCTGATCATCGCGACCGGCGCATCGGCGCAATACCTCGGCCTGCCGTCGGAAGAAGCGTTCATGGGCAAGG GCGTGTCGGCTTGCGCCACCTGCGACGGTTTCTTCTACAAGCAGCAACATGTGGCCGTGATCGGCGGCGGCAATACTGCG GTCGAGGAAGCCCTCTATCTGGCCGGGATCGCGAAGAAGGTGACCGTGATCCATCGCCGCGACAAGTTCCGCGCCGAGCC GATCCTGATCGACCGTCTGCTGGCCAAAGAGAAAGAAGGCATTGTCGAGATCAAGTGGAACCACACGCTCGACGAAGTGA CCGGCGACCAGTCCGGCGTGACCGGCCTGCGCATCAAGCACACGCAGACCGGCGAAACCACGGACCTCGCGCTGCAGGGC CTGTTCGTCGCGATCGGCCACAAGCCGAACACGGACATTTTCGCGGGCCAGCTGGAGATGAAGAACGGCTACATCATCAC CAAGGGCGGCCTGAACGGCTTTGCAACCGCCACCAGCGTGCCGGGCGTATTCGCCGCAGGCGACGTGCAGGACCACGTGT ACCGCCAGGCAATCACCAGCGCGGGCACGGGCTGTATGGCCGCGCTCGACGCGCAGCGCTATCTGGAAACCATCGACGAG ATGGCCGGCGAACACGCCATGAGCCAGGAAGCCGGGCGTTGA
Upstream 100 bases:
>100_bases GCCCCGCCCTTTATAATGCCGCACTGATACCCAACTATAGTTCCAGCTCAAGTCGCGCGGCCTCGCATGGGCGAGCCGGG CGCCGTAAAAGGATTCGATC
Downstream 100 bases:
>100_bases TCGGCCGCGCCGGTCCGCGAACCGGCCGGGAAGATTAGCGCAACGGTAAAATGGCGGCTGGGCATGGCCCGGCCGCCTGC TCGAACAAGGCCGCGGCTGA
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPATSTKHAKVLILGSGPAGYTAAVYAARANLAPVLVTGLAQGGQLMTTTDVENWPADANGVQGPELMARFLEHAERFNT EIIFDHIHTAKLDEKPIRLIGDSGEYTCDSLIIATGASAQYLGLPSEEAFMGKGVSACATCDGFFYKQQHVAVIGGGNTA VEEALYLAGIAKKVTVIHRRDKFRAEPILIDRLLAKEKEGIVEIKWNHTLDEVTGDQSGVTGLRIKHTQTGETTDLALQG LFVAIGHKPNTDIFAGQLEMKNGYIITKGGLNGFATATSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRYLETIDE MAGEHAMSQEAGR
Sequences:
>Translated_333_residues MPATSTKHAKVLILGSGPAGYTAAVYAARANLAPVLVTGLAQGGQLMTTTDVENWPADANGVQGPELMARFLEHAERFNT EIIFDHIHTAKLDEKPIRLIGDSGEYTCDSLIIATGASAQYLGLPSEEAFMGKGVSACATCDGFFYKQQHVAVIGGGNTA VEEALYLAGIAKKVTVIHRRDKFRAEPILIDRLLAKEKEGIVEIKWNHTLDEVTGDQSGVTGLRIKHTQTGETTDLALQG LFVAIGHKPNTDIFAGQLEMKNGYIITKGGLNGFATATSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRYLETIDE MAGEHAMSQEAGR >Mature_332_residues PATSTKHAKVLILGSGPAGYTAAVYAARANLAPVLVTGLAQGGQLMTTTDVENWPADANGVQGPELMARFLEHAERFNTE IIFDHIHTAKLDEKPIRLIGDSGEYTCDSLIIATGASAQYLGLPSEEAFMGKGVSACATCDGFFYKQQHVAVIGGGNTAV EEALYLAGIAKKVTVIHRRDKFRAEPILIDRLLAKEKEGIVEIKWNHTLDEVTGDQSGVTGLRIKHTQTGETTDLALQGL FVAIGHKPNTDIFAGQLEMKNGYIITKGGLNGFATATSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRYLETIDEM AGEHAMSQEAGR
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=313, Percent_Identity=69.9680511182109, Blast_Score=456, Evalue=1e-129, Organism=Escherichia coli, GI87081763, Length=312, Percent_Identity=36.5384615384615, Blast_Score=146, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320560, Length=324, Percent_Identity=47.8395061728395, Blast_Score=280, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6321898, Length=320, Percent_Identity=47.1875, Blast_Score=271, Evalue=1e-73,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 35447; Mature: 35315
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATSTKHAKVLILGSGPAGYTAAVYAARANLAPVLVTGLAQGGQLMTTTDVENWPADAN CCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCC GVQGPELMARFLEHAERFNTEIIFDHIHTAKLDEKPIRLIGDSGEYTCDSLIIATGASAQ CCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCEEEECCCCCCEECEEEEEECCCCE YLGLPSEEAFMGKGVSACATCDGFFYKQQHVAVIGGGNTAVEEALYLAGIAKKVTVIHRR EECCCCCHHHHCCCCHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHEEEEEC DKFRAEPILIDRLLAKEKEGIVEIKWNHTLDEVTGDQSGVTGLRIKHTQTGETTDLALQG CCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHEE LFVAIGHKPNTDIFAGQLEMKNGYIITKGGLNGFATATSVPGVFAAGDVQDHVYRQAITS EEEEECCCCCCCEEEEEEEECCCEEEEECCCCCCCHHCCCCCEEEECCHHHHHHHHHHHH AGTGCMAALDAQRYLETIDEMAGEHAMSQEAGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PATSTKHAKVLILGSGPAGYTAAVYAARANLAPVLVTGLAQGGQLMTTTDVENWPADAN CCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCC GVQGPELMARFLEHAERFNTEIIFDHIHTAKLDEKPIRLIGDSGEYTCDSLIIATGASAQ CCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCEEEECCCCCCEECEEEEEECCCCE YLGLPSEEAFMGKGVSACATCDGFFYKQQHVAVIGGGNTAVEEALYLAGIAKKVTVIHRR EECCCCCHHHHCCCCHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHEEEEEC DKFRAEPILIDRLLAKEKEGIVEIKWNHTLDEVTGDQSGVTGLRIKHTQTGETTDLALQG CCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHEE LFVAIGHKPNTDIFAGQLEMKNGYIITKGGLNGFATATSVPGVFAAGDVQDHVYRQAITS EEEEECCCCCCCEEEEEEEECCCEEEEECCCCCCCHHCCCCCEEEECCHHHHHHHHHHHH AGTGCMAALDAQRYLETIDEMAGEHAMSQEAGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]