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The map label for this gene is potD [C]

Identifier: 91782361

GI number: 91782361

Start: 1097632

End: 1098678

Strand: Reverse

Name: potD [C]

Synonym: Bxe_A3470

Alternate gene names: 91782361

Gene position: 1098678-1097632 (Counterclockwise)

Preceding gene: 91782362

Following gene: 91782360

Centisome position: 22.44

GC content: 63.51

Gene sequence:

>1047_bases
ATGCGCAACAACCTCAAAGCACAATGCGCCGCACTCGCCGTGCTCGCGTTCACCGCCGCGGCCACCCAGGCAGCGGAGAC
GCTTTCCGTCGTGACCTTCGGCGGCGCGTATGAAGCGGCCGCGAAGAAGGCCTATTTCGAGCCGTTCACGCAGGCCACCG
GCATCGGCTTCTCGACCGAATCGTATGACGGCGGTCTCGCCAAGCTCTCCGCGATGGAGCAGGCGAAGAACACCACGTGG
GACCTGATCGACCTCGAAACGAACGACGCGATCACCGCCTGCGACGAAGGCCTCCTGCAGAAGTTCGACAAGAAGTCGCT
CGGCAAGACGAGCGACTTCATCCCCGGCTCGATCAGCGATTGCGCGGTCGCGAGCATGGTCTGGTCCACGGTCTACGCCT
ACGATGCAAGCAAGCTCAAGACCGCGCCGACCACCGTCAACGACTTCTTCGACCTGCAGAAATTCCCTGGCAAGCGCGGC
CTGCGCAAGTCGCCGAAGGTCTCGATGGAATGGGCGCTGATCGCCGACGGCGTCGATCCCAAGGATGTCTACAAAGTGCT
CGGCACGCCCGCCGGCGTGGATCGCGCGTTCAGGAAACTCGATACGATCAAGAAGAGCATTGTGTGGTGGGAGTCGGGCG
CGCAGGCGCCGCAGTTGCTCGCGGACGGCGCGGTGGTGATGACGCAGGCCTACAACGGCCGCATCGACGACGCCGCGAAG
AAAGACAACAAGCCGTTCAAGGCCGTCTGGGACGCGCAGGTCTACGACTTCGACTGGTGGGGCGTGCCGACCGGCGCGAA
GCATGCCGACGCGGCCGCGAAGTTCATCGTCTCGGCTTCGCAGCCGAAGGCGTATGCGGACCTGACGAAATACATCGCCT
ATGCGCCGCCGCGCAAGGACGCGATCGCGCTCATCGACAAGCAGCGCCTCGCCGATCTGCCGACGTCACCGCAGAACTTC
AAGCGCGCATTGCAGATCAACGCAACCTTCTGGGCCGACAACGCGGACCAGATCAACAAGCGCTTCCAGGTGTGGCTGAC
GCAGTAA

Upstream 100 bases:

>100_bases
ATTCTCGCGGCCAGCGCGCCACGCAGCGCGCCCGCGCTCCAGGTATCCACACCGCCTTCACCTTCCATCATCACTACAGC
AGCCGCAGGAGCCAACTGAT

Downstream 100 bases:

>100_bases
CCCCATCGTCCGACGAGAGCCCAACGTGACTACCAGCATGCCCGCTCCGGCCCGCGCCACAGCCGTGGGCTCTCCGACGA
GAGCCGACGGCGGCGCGTCA

Product: ABC spermidine/putrescine transporter, periplasmic ligand binding protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: None

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRNNLKAQCAALAVLAFTAAATQAAETLSVVTFGGAYEAAAKKAYFEPFTQATGIGFSTESYDGGLAKLSAMEQAKNTTW
DLIDLETNDAITACDEGLLQKFDKKSLGKTSDFIPGSISDCAVASMVWSTVYAYDASKLKTAPTTVNDFFDLQKFPGKRG
LRKSPKVSMEWALIADGVDPKDVYKVLGTPAGVDRAFRKLDTIKKSIVWWESGAQAPQLLADGAVVMTQAYNGRIDDAAK
KDNKPFKAVWDAQVYDFDWWGVPTGAKHADAAAKFIVSASQPKAYADLTKYIAYAPPRKDAIALIDKQRLADLPTSPQNF
KRALQINATFWADNADQINKRFQVWLTQ

Sequences:

>Translated_348_residues
MRNNLKAQCAALAVLAFTAAATQAAETLSVVTFGGAYEAAAKKAYFEPFTQATGIGFSTESYDGGLAKLSAMEQAKNTTW
DLIDLETNDAITACDEGLLQKFDKKSLGKTSDFIPGSISDCAVASMVWSTVYAYDASKLKTAPTTVNDFFDLQKFPGKRG
LRKSPKVSMEWALIADGVDPKDVYKVLGTPAGVDRAFRKLDTIKKSIVWWESGAQAPQLLADGAVVMTQAYNGRIDDAAK
KDNKPFKAVWDAQVYDFDWWGVPTGAKHADAAAKFIVSASQPKAYADLTKYIAYAPPRKDAIALIDKQRLADLPTSPQNF
KRALQINATFWADNADQINKRFQVWLTQ
>Mature_348_residues
MRNNLKAQCAALAVLAFTAAATQAAETLSVVTFGGAYEAAAKKAYFEPFTQATGIGFSTESYDGGLAKLSAMEQAKNTTW
DLIDLETNDAITACDEGLLQKFDKKSLGKTSDFIPGSISDCAVASMVWSTVYAYDASKLKTAPTTVNDFFDLQKFPGKRG
LRKSPKVSMEWALIADGVDPKDVYKVLGTPAGVDRAFRKLDTIKKSIVWWESGAQAPQLLADGAVVMTQAYNGRIDDAAK
KDNKPFKAVWDAQVYDFDWWGVPTGAKHADAAAKFIVSASQPKAYADLTKYIAYAPPRKDAIALIDKQRLADLPTSPQNF
KRALQINATFWADNADQINKRFQVWLTQ

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38015; Mature: 38015

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNLKAQCAALAVLAFTAAATQAAETLSVVTFGGAYEAAAKKAYFEPFTQATGIGFSTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCC
SYDGGLAKLSAMEQAKNTTWDLIDLETNDAITACDEGLLQKFDKKSLGKTSDFIPGSISD
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
CAVASMVWSTVYAYDASKLKTAPTTVNDFFDLQKFPGKRGLRKSPKVSMEWALIADGVDP
HHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCH
KDVYKVLGTPAGVDRAFRKLDTIKKSIVWWESGAQAPQLLADGAVVMTQAYNGRIDDAAK
HHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHH
KDNKPFKAVWDAQVYDFDWWGVPTGAKHADAAAKFIVSASQPKAYADLTKYIAYAPPRKD
HCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCC
AIALIDKQRLADLPTSPQNFKRALQINATFWADNADQINKRFQVWLTQ
HHHHHHHHHHHCCCCCHHHHHHEEEEEEEEECCCHHHHCCEEEEEECC
>Mature Secondary Structure
MRNNLKAQCAALAVLAFTAAATQAAETLSVVTFGGAYEAAAKKAYFEPFTQATGIGFSTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCC
SYDGGLAKLSAMEQAKNTTWDLIDLETNDAITACDEGLLQKFDKKSLGKTSDFIPGSISD
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
CAVASMVWSTVYAYDASKLKTAPTTVNDFFDLQKFPGKRGLRKSPKVSMEWALIADGVDP
HHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCH
KDVYKVLGTPAGVDRAFRKLDTIKKSIVWWESGAQAPQLLADGAVVMTQAYNGRIDDAAK
HHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHH
KDNKPFKAVWDAQVYDFDWWGVPTGAKHADAAAKFIVSASQPKAYADLTKYIAYAPPRKD
HCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCC
AIALIDKQRLADLPTSPQNFKRALQINATFWADNADQINKRFQVWLTQ
HHHHHHHHHHHCCCCCHHHHHHEEEEEEEEECCCHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA