Click here to switch to the map view.

The map label for this gene is ydiI [C]

Identifier: 91782340

GI number: 91782340

Start: 1070878

End: 1071297

Strand: Reverse

Name: ydiI [C]

Synonym: Bxe_A3491

Alternate gene names: 91782340

Gene position: 1071297-1070878 (Counterclockwise)

Preceding gene: 91782342

Following gene: 91782338

Centisome position: 21.88

GC content: 62.86

Gene sequence:

>420_bases
ATGAGCAAACTGCGCCCGGAATACACCGTCGAACACCTTCACGAACGCCAGAAAGGCTCGCTGCCGGGCCTGCTGGGCGT
GCATGTCGTGTCGCTGGAAGAAGGCGCGCTGACCGCGGAATTGACCGTGCGCACGGAACTGCTTGCGCCGAACGGCTTTT
TGCATGCCGCCACCGTGATCGGTCTCGCCGACACCGCCTGCGGCTACGCCTGCCTCGCGCATCTGCCGGAGACGGCGCGC
AATTTCACGACGATCGAAGTGAAAAGCAATTTTCTCGGCACGGCGACGGAAGGGACGATCCGCGCGGTCGCAAAGAGCGT
GCATCTGGGGCGCAGCACGCAGGTTTGGGACGCCACGGTCACGGATCCGAAGGGCAAGACGATGGCGCTGTTCCGGTGTA
CGCAGATCGTGTTGTATTGA

Upstream 100 bases:

>100_bases
CAGCCGTTGATAATATCGACAAATGCACGTTGGCCGAAGCCCCCAAACGGCTAATTAGCCGCCGTGCACCGCCGATTTTT
CCAACCAGGACCCGAATCTC

Downstream 100 bases:

>100_bases
TTGGGCGATGGTAGAACCACGCCATGAAAAAAGGCACGCAGCCCTGCGGCGCGTGCTTTTTCAACCCTCCGCCTAACCGC
TCAGGCGGCCACCGCCCGCG

Product: phenylacetic acid degradation-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSKLRPEYTVEHLHERQKGSLPGLLGVHVVSLEEGALTAELTVRTELLAPNGFLHAATVIGLADTACGYACLAHLPETAR
NFTTIEVKSNFLGTATEGTIRAVAKSVHLGRSTQVWDATVTDPKGKTMALFRCTQIVLY

Sequences:

>Translated_139_residues
MSKLRPEYTVEHLHERQKGSLPGLLGVHVVSLEEGALTAELTVRTELLAPNGFLHAATVIGLADTACGYACLAHLPETAR
NFTTIEVKSNFLGTATEGTIRAVAKSVHLGRSTQVWDATVTDPKGKTMALFRCTQIVLY
>Mature_138_residues
SKLRPEYTVEHLHERQKGSLPGLLGVHVVSLEEGALTAELTVRTELLAPNGFLHAATVIGLADTACGYACLAHLPETARN
FTTIEVKSNFLGTATEGTIRAVAKSVHLGRSTQVWDATVTDPKGKTMALFRCTQIVLY

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=137, Percent_Identity=28.4671532846715, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15002; Mature: 14871

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLRPEYTVEHLHERQKGSLPGLLGVHVVSLEEGALTAELTVRTELLAPNGFLHAATVI
CCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHH
GLADTACGYACLAHLPETARNFTTIEVKSNFLGTATEGTIRAVAKSVHLGRSTQVWDATV
HHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE
TDPKGKTMALFRCTQIVLY
ECCCCCEEHEEEEEEHCCC
>Mature Secondary Structure 
SKLRPEYTVEHLHERQKGSLPGLLGVHVVSLEEGALTAELTVRTELLAPNGFLHAATVI
CCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHH
GLADTACGYACLAHLPETARNFTTIEVKSNFLGTATEGTIRAVAKSVHLGRSTQVWDATV
HHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE
TDPKGKTMALFRCTQIVLY
ECCCCCEEHEEEEEEHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]