| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is btuC [H]
Identifier: 91782330
GI number: 91782330
Start: 1061088
End: 1062098
Strand: Direct
Name: btuC [H]
Synonym: Bxe_A3501
Alternate gene names: 91782330
Gene position: 1061088-1062098 (Clockwise)
Preceding gene: 91782329
Following gene: 91782331
Centisome position: 21.67
GC content: 72.8
Gene sequence:
>1011_bases ATGAGCGCGAAGCGCGCGGCCGCGATCTGGCTCGCGCTCGCTGTCATCGCGCTGGCCGTGCTGATGGCGTCGCTCGCGCT GGGCAGCGTATCGCTCGCGCCGCTGCGCGTGCTGGCGGCGCTGGTGCCAGCGCATGGGCCGTCTGCCGGCTCCTCTGATC TGACTGCCGAGATCGTGCGCACGCTGCGTTTGCCGCGCGCGGTGGCCGGCTTTGCGTGCGGCGCGTTGCTCGCATTGGCG GGCGCGCTGCTGCAGGTGCTGTTGCGCAATCCGCTCGCCGAACCCTACGTGCTGGGTGTGTCGGGCGGCGCGGCCAGCTT CGCGCTCGTCGCGATGATCGCCGGCTGCGCCTGGTGGATGGTCGACGCGAGCGCCTTCGCCGGCGCCTTCGCGTCGATCC TGCTGGTGCTCGGCCTCGCGCGCCGCGAGTTGTGGCGCGGCGAGCCGCAGGACACGTCGCCACGTCTGCTGCTGACGGGC GCGGTGATCGCCGCGGGCTGGGGCGCGCTCATCACCTTGCTGCTCAACCTCGCGCCGGACAACCGTCTGCGCGGCATGCT GTTCTGGCTGACCGGCGACCTCAACGGCGGCGCGATGCCGTGGACGGCGCTCGCCGCGCTGGTCGTCGCGCTGGCGGCGA TCGTGCCGGCCGCGCCGCGTCTGAACGTGCTGCTGCGTGGCGACGCCGCCGCGCAGGCGTTGGGCGTGGCGGTGATGCCG TTGCGCTTGCGCGTGTATCTGGTGGCTTCGCTGGCGGCGGCCGCGGCGGTGACGACGGCGGGCACCATCGGCTTTGTCGG GCTGGTCGTGCCGCATATGCTGCGGCTCGCGTTCGGCAACGATCAGCGCATGCTGCTGCCGGCCGCCGCGCTCGGCGGCG GCGTCGCCGTGATGGGCGCGGACCTGATCGCGCGCACCGTGATCGCGCCGGCGCAGTTGCCGGTCGGCGTGATCACGTCG ATCATCGGCGTGCCGGTGTTTCTGTGGATGCTCTTGCGCAGACGCCGATGA
Upstream 100 bases:
>100_bases GAGCCGACTTATGAGCCAACCCGCGAGCCAACCCACGAGCCCACAAGCGAGCCCACAAGCGACCCGCCACCCCGGCCCGA TACCCGCGACGCTGCGCGTG
Downstream 100 bases:
>100_bases TGCCGAGCTTCGAACCTTCCCGGGCTGTCCTCAGCGCGCAACGTCTGACTTTGCGTGCCGGCGCGCGCACCTTGCTCGAT GCATTCACGCATACGTTCTA
Product: ABC Fe3+-hydroxamate/cobalamin transporter, inner membrane subunit
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSAKRAAAIWLALAVIALAVLMASLALGSVSLAPLRVLAALVPAHGPSAGSSDLTAEIVRTLRLPRAVAGFACGALLALA GALLQVLLRNPLAEPYVLGVSGGAASFALVAMIAGCAWWMVDASAFAGAFASILLVLGLARRELWRGEPQDTSPRLLLTG AVIAAGWGALITLLLNLAPDNRLRGMLFWLTGDLNGGAMPWTALAALVVALAAIVPAAPRLNVLLRGDAAAQALGVAVMP LRLRVYLVASLAAAAAVTTAGTIGFVGLVVPHMLRLAFGNDQRMLLPAAALGGGVAVMGADLIARTVIAPAQLPVGVITS IIGVPVFLWMLLRRRR
Sequences:
>Translated_336_residues MSAKRAAAIWLALAVIALAVLMASLALGSVSLAPLRVLAALVPAHGPSAGSSDLTAEIVRTLRLPRAVAGFACGALLALA GALLQVLLRNPLAEPYVLGVSGGAASFALVAMIAGCAWWMVDASAFAGAFASILLVLGLARRELWRGEPQDTSPRLLLTG AVIAAGWGALITLLLNLAPDNRLRGMLFWLTGDLNGGAMPWTALAALVVALAAIVPAAPRLNVLLRGDAAAQALGVAVMP LRLRVYLVASLAAAAAVTTAGTIGFVGLVVPHMLRLAFGNDQRMLLPAAALGGGVAVMGADLIARTVIAPAQLPVGVITS IIGVPVFLWMLLRRRR >Mature_335_residues SAKRAAAIWLALAVIALAVLMASLALGSVSLAPLRVLAALVPAHGPSAGSSDLTAEIVRTLRLPRAVAGFACGALLALAG ALLQVLLRNPLAEPYVLGVSGGAASFALVAMIAGCAWWMVDASAFAGAFASILLVLGLARRELWRGEPQDTSPRLLLTGA VIAAGWGALITLLLNLAPDNRLRGMLFWLTGDLNGGAMPWTALAALVVALAAIVPAAPRLNVLLRGDAAAQALGVAVMPL RLRVYLVASLAAAAAVTTAGTIGFVGLVVPHMLRLAFGNDQRMLLPAAALGGGVAVMGADLIARTVIAPAQLPVGVITSI IGVPVFLWMLLRRRR
Specific function: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790740, Length=282, Percent_Identity=37.2340425531915, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1788004, Length=284, Percent_Identity=37.6760563380282, Blast_Score=131, Evalue=6e-32, Organism=Escherichia coli, GI1790741, Length=302, Percent_Identity=35.7615894039735, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786347, Length=300, Percent_Identity=31.6666666666667, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786805, Length=320, Percent_Identity=36.25, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1786804, Length=313, Percent_Identity=37.6996805111821, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 34343; Mature: 34212
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKRAAAIWLALAVIALAVLMASLALGSVSLAPLRVLAALVPAHGPSAGSSDLTAEIVR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH TLRLPRAVAGFACGALLALAGALLQVLLRNPLAEPYVLGVSGGAASFALVAMIAGCAWWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH VDASAFAGAFASILLVLGLARRELWRGEPQDTSPRLLLTGAVIAAGWGALITLLLNLAPD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCC NRLRGMLFWLTGDLNGGAMPWTALAALVVALAAIVPAAPRLNVLLRGDAAAQALGVAVMP CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH LRLRVYLVASLAAAAAVTTAGTIGFVGLVVPHMLRLAFGNDQRMLLPAAALGGGVAVMGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHH DLIARTVIAPAQLPVGVITSIIGVPVFLWMLLRRRR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAKRAAAIWLALAVIALAVLMASLALGSVSLAPLRVLAALVPAHGPSAGSSDLTAEIVR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH TLRLPRAVAGFACGALLALAGALLQVLLRNPLAEPYVLGVSGGAASFALVAMIAGCAWWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH VDASAFAGAFASILLVLGLARRELWRGEPQDTSPRLLLTGAVIAAGWGALITLLLNLAPD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCC NRLRGMLFWLTGDLNGGAMPWTALAALVVALAAIVPAAPRLNVLLRGDAAAQALGVAVMP CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH LRLRVYLVASLAAAAAVTTAGTIGFVGLVVPHMLRLAFGNDQRMLLPAAALGGGVAVMGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHH DLIARTVIAPAQLPVGVITSIIGVPVFLWMLLRRRR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA