| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782318
Identifier: 91782318
GI number: 91782318
Start: 1049518
End: 1051041
Strand: Reverse
Name: 91782318
Synonym: Bxe_A3513
Alternate gene names: NA
Gene position: 1051041-1049518 (Counterclockwise)
Preceding gene: 91782319
Following gene: 91782314
Centisome position: 21.47
GC content: 52.76
Gene sequence:
>1524_bases ATGACTAGCAATCAGCTATTCCGTTTGGTCAGAGATTTCTCGTTCCCGGAGCCGATTGAGCAGAACAGCTCGACCGGAGA ATATCTGACATGCCTCACAACGATGCCAGCCGCAATGGCGATATGCTGGCCAGACGGCCGCCCGTGCTGCCTGGCCGAGA TGTATCTATTAGAACGTTGGCCCGAATGTACAAGTCGTCGACTTGATGGCGGCTCTTTAAAAGTGTTCGCAGCTCAACTT TCACTGCTCTTGCGCTTCGCCTTTAACTCAAAGGTGAATTTGTGGGACTTCGACGATTTACGCATGAAAACCGCAATTTC TTGGCTTCAGCGTGAACGCAGTTCTCGCAATCCGGCTGAGCACCGACGTGACGATAACACGACACGTCGAATCGTCGCGA CGTGGGTATCATTTTTTCAATGGCTGCAAGTGCAATTATGTTGTGAGAAGCCAATTGTCGGGACCTCCGACGTCAATCCA CGCATACTGTTGAAGCTTAAAAAGAGTATCGGTCGACATGGCAAGGTTGTCATGTCTCTAGAGTATAGATATAGCCCCGA GCCAGTCACTCACGAAGACGCGCGGGGACCTATTGCACGAGAATTGAAGCTTCGACTATGGGAAGCGGTTAACAAGATGG CATCTAGGACACTCGCAAAACAAGGGCTACGTCTCAGCGACAAACTGCACACCGAAGAAATGATCGTAACCGAATACCTA CGGAAACGCAGAGAGGCTCTCCTTGCGCTGCTCGAGGCGACTGGCGCGCGCCCCGGTGAACTGGCCCGAGTCTCCGTGGA GAAGAATCGCGCTGCCCTGAAGAAAGCGAAATTACTTATGTGCACGTTGAAGCGTCGTAAGTCTATCGACCCCGAGCGAA TCGTACCGATCGACCGTGCCGTCGCCATGCGGATTGAGGTCTTTATATACAAATATCGAGCTCCTCTCATCGAGATGCTA GAGAAAAAAGGCCGCCGGGTCGACACTGGCGATTGTATGTTTTTGACAGTTGAAGGCAAACCGCTCACGGAATCGACCTT GGAGAAAGAATTCCCCAGAATTGTACAAGCAGCCGGGTTGCAAGATGAGCGCGCCTGCATGTCGATGTTCCGTCATCGTT TCATCACGAACATGGTGAAGCTGCACCTCATGGAGTTCATGAGCGCAAACCCGCTTAAGAACGGAAGACGGTTCATTACC GACTCAGACTATCGGACTATCTTGAAACGCGTCGCTGTTTTCACCGGTCACGGCGATGAACAAAGCCTTCTAGATTATAT AGATCTCGCGTGGGAGGAAATGGGCATATTCGACTACGTGGAGCCTGCGCGGGTACTGGCCTCTGCGGTGGAAAGCGGCC TCAATCGCGTCAGCGGCCTGCTCGCAACCATCCAATCAGGCGTGGATCTTTCCAGGCTTGATATCCGGATGCGGGTCGTT GATGAACTTTGCCATATCCGCAGCGTCACGTTGGAGGCGTTGGCACAGGACCGATCGGCATGTGCGACTGGGGCACTAGC GTAG
Upstream 100 bases:
>100_bases CTCGTTGCAAATGACCCACAAGGGCGAGAAGCGATCTTCAGGCATCAAAGCGTTTGGGGAAAAAACCTCGCCCTAACTAT AGTCACTCCGGAGAAACAGA
Downstream 100 bases:
>100_bases CTTCTTGCGAGACAGCGTAAAGCTTGAGATCGGAACAAGTCTAGATACCGAGGATTTTGCAAATAGCGTCAAACTCAGTC ACTGAGACTGGCATCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTSNQLFRLVRDFSFPEPIEQNSSTGEYLTCLTTMPAAMAICWPDGRPCCLAEMYLLERWPECTSRRLDGGSLKVFAAQL SLLLRFAFNSKVNLWDFDDLRMKTAISWLQRERSSRNPAEHRRDDNTTRRIVATWVSFFQWLQVQLCCEKPIVGTSDVNP RILLKLKKSIGRHGKVVMSLEYRYSPEPVTHEDARGPIARELKLRLWEAVNKMASRTLAKQGLRLSDKLHTEEMIVTEYL RKRREALLALLEATGARPGELARVSVEKNRAALKKAKLLMCTLKRRKSIDPERIVPIDRAVAMRIEVFIYKYRAPLIEML EKKGRRVDTGDCMFLTVEGKPLTESTLEKEFPRIVQAAGLQDERACMSMFRHRFITNMVKLHLMEFMSANPLKNGRRFIT DSDYRTILKRVAVFTGHGDEQSLLDYIDLAWEEMGIFDYVEPARVLASAVESGLNRVSGLLATIQSGVDLSRLDIRMRVV DELCHIRSVTLEALAQDRSACATGALA
Sequences:
>Translated_507_residues MTSNQLFRLVRDFSFPEPIEQNSSTGEYLTCLTTMPAAMAICWPDGRPCCLAEMYLLERWPECTSRRLDGGSLKVFAAQL SLLLRFAFNSKVNLWDFDDLRMKTAISWLQRERSSRNPAEHRRDDNTTRRIVATWVSFFQWLQVQLCCEKPIVGTSDVNP RILLKLKKSIGRHGKVVMSLEYRYSPEPVTHEDARGPIARELKLRLWEAVNKMASRTLAKQGLRLSDKLHTEEMIVTEYL RKRREALLALLEATGARPGELARVSVEKNRAALKKAKLLMCTLKRRKSIDPERIVPIDRAVAMRIEVFIYKYRAPLIEML EKKGRRVDTGDCMFLTVEGKPLTESTLEKEFPRIVQAAGLQDERACMSMFRHRFITNMVKLHLMEFMSANPLKNGRRFIT DSDYRTILKRVAVFTGHGDEQSLLDYIDLAWEEMGIFDYVEPARVLASAVESGLNRVSGLLATIQSGVDLSRLDIRMRVV DELCHIRSVTLEALAQDRSACATGALA >Mature_506_residues TSNQLFRLVRDFSFPEPIEQNSSTGEYLTCLTTMPAAMAICWPDGRPCCLAEMYLLERWPECTSRRLDGGSLKVFAAQLS LLLRFAFNSKVNLWDFDDLRMKTAISWLQRERSSRNPAEHRRDDNTTRRIVATWVSFFQWLQVQLCCEKPIVGTSDVNPR ILLKLKKSIGRHGKVVMSLEYRYSPEPVTHEDARGPIARELKLRLWEAVNKMASRTLAKQGLRLSDKLHTEEMIVTEYLR KRREALLALLEATGARPGELARVSVEKNRAALKKAKLLMCTLKRRKSIDPERIVPIDRAVAMRIEVFIYKYRAPLIEMLE KKGRRVDTGDCMFLTVEGKPLTESTLEKEFPRIVQAAGLQDERACMSMFRHRFITNMVKLHLMEFMSANPLKNGRRFITD SDYRTILKRVAVFTGHGDEQSLLDYIDLAWEEMGIFDYVEPARVLASAVESGLNRVSGLLATIQSGVDLSRLDIRMRVVD ELCHIRSVTLEALAQDRSACATGALA
Specific function: Unknown
COG id: COG4974
COG function: function code L; Site-specific recombinase XerD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58008; Mature: 57877
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNQLFRLVRDFSFPEPIEQNSSTGEYLTCLTTMPAAMAICWPDGRPCCLAEMYLLERW CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHC PECTSRRLDGGSLKVFAAQLSLLLRFAFNSKVNLWDFDDLRMKTAISWLQRERSSRNPAE HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH HRRDDNTTRRIVATWVSFFQWLQVQLCCEKPIVGTSDVNPRILLKLKKSIGRHGKVVMSL HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEE EYRYSPEPVTHEDARGPIARELKLRLWEAVNKMASRTLAKQGLRLSDKLHTEEMIVTEYL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RKRREALLALLEATGARPGELARVSVEKNRAALKKAKLLMCTLKRRKSIDPERIVPIDRA HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH VAMRIEVFIYKYRAPLIEMLEKKGRRVDTGDCMFLTVEGKPLTESTLEKEFPRIVQAAGL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC QDERACMSMFRHRFITNMVKLHLMEFMSANPLKNGRRFITDSDYRTILKRVAVFTGHGDE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCH QSLLDYIDLAWEEMGIFDYVEPARVLASAVESGLNRVSGLLATIQSGVDLSRLDIRMRVV HHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DELCHIRSVTLEALAQDRSACATGALA HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSNQLFRLVRDFSFPEPIEQNSSTGEYLTCLTTMPAAMAICWPDGRPCCLAEMYLLERW CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHC PECTSRRLDGGSLKVFAAQLSLLLRFAFNSKVNLWDFDDLRMKTAISWLQRERSSRNPAE HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH HRRDDNTTRRIVATWVSFFQWLQVQLCCEKPIVGTSDVNPRILLKLKKSIGRHGKVVMSL HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEE EYRYSPEPVTHEDARGPIARELKLRLWEAVNKMASRTLAKQGLRLSDKLHTEEMIVTEYL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RKRREALLALLEATGARPGELARVSVEKNRAALKKAKLLMCTLKRRKSIDPERIVPIDRA HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH VAMRIEVFIYKYRAPLIEMLEKKGRRVDTGDCMFLTVEGKPLTESTLEKEFPRIVQAAGL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC QDERACMSMFRHRFITNMVKLHLMEFMSANPLKNGRRFITDSDYRTILKRVAVFTGHGDE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCH QSLLDYIDLAWEEMGIFDYVEPARVLASAVESGLNRVSGLLATIQSGVDLSRLDIRMRVV HHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DELCHIRSVTLEALAQDRSACATGALA HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA