| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782317
Identifier: 91782317
GI number: 91782317
Start: 1049016
End: 1049477
Strand: Direct
Name: 91782317
Synonym: Bxe_A3514
Alternate gene names: NA
Gene position: 1049016-1049477 (Clockwise)
Preceding gene: 91782316
Following gene: 91782321
Centisome position: 21.43
GC content: 51.95
Gene sequence:
>462_bases TTGCGACACTGGCTCCTAAAATCGGAACCGTCTGAATTCGGCATCGATGATTTGGCCCAATCATCGAAACAAACCGCTCC TTGGACCGGTATCAGGAATTACCAAGCGCGGAATTTCTTGCGGGATGAATCTTCGGTTGGCGATCTGGCGTTCTTCTACC ACTCTAGTTGTCCGCAGCCTGGCATCGCTGGGCTCATGCTAATTGCATCCAAAGCCTACGCAGATCCCACGCAATTCGAC CAGAGCAGCCCGTATTTTGATCTCAAATCGACAGACGAAAAACCACGGTGGACGGCGGTCGACGTGAAGCTGGTCAAGAA AACTCGTCTCCTTGGGCTTGACGAGATGCGTCGGGTTGACGAATTGAGCGGCATGCGTTTGCTTGCACGCGGAAACAGAT TGTCGGTGATGCCAGTCTCAGTGACTGAGTTTGACGCTATTTGCAAAATCCTCGGTATCTAG
Upstream 100 bases:
>100_bases TGAAGTGAATTTCTAACTCGCGACACTAGAATGTCATCCTGACAGCGGCGATTTCGTCCCCGCTCTCGTCCTGCATCCGC TATTTCAACGAGGTCTTACG
Downstream 100 bases:
>100_bases ACTTGTTCCGATCTCAAGCTTTACGCTGTCTCGCAAGAAGCTACGCTAGTGCCCCAGTCGCACATGCCGATCGGTCCTGT GCCAACGCCTCCAACGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRHWLLKSEPSEFGIDDLAQSSKQTAPWTGIRNYQARNFLRDESSVGDLAFFYHSSCPQPGIAGLMLIASKAYADPTQFD QSSPYFDLKSTDEKPRWTAVDVKLVKKTRLLGLDEMRRVDELSGMRLLARGNRLSVMPVSVTEFDAICKILGI
Sequences:
>Translated_153_residues MRHWLLKSEPSEFGIDDLAQSSKQTAPWTGIRNYQARNFLRDESSVGDLAFFYHSSCPQPGIAGLMLIASKAYADPTQFD QSSPYFDLKSTDEKPRWTAVDVKLVKKTRLLGLDEMRRVDELSGMRLLARGNRLSVMPVSVTEFDAICKILGI >Mature_153_residues MRHWLLKSEPSEFGIDDLAQSSKQTAPWTGIRNYQARNFLRDESSVGDLAFFYHSSCPQPGIAGLMLIASKAYADPTQFD QSSPYFDLKSTDEKPRWTAVDVKLVKKTRLLGLDEMRRVDELSGMRLLARGNRLSVMPVSVTEFDAICKILGI
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=163, Percent_Identity=43.558282208589, Blast_Score=137, Evalue=3e-33, Organism=Homo sapiens, GI40806221, Length=163, Percent_Identity=43.558282208589, Blast_Score=137, Evalue=3e-33, Organism=Homo sapiens, GI7661804, Length=163, Percent_Identity=43.558282208589, Blast_Score=137, Evalue=3e-33, Organism=Homo sapiens, GI83267859, Length=105, Percent_Identity=50.4761904761905, Blast_Score=117, Evalue=4e-27, Organism=Homo sapiens, GI40806219, Length=105, Percent_Identity=50.4761904761905, Blast_Score=117, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17259; Mature: 17259
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHWLLKSEPSEFGIDDLAQSSKQTAPWTGIRNYQARNFLRDESSVGDLAFFYHSSCPQP CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC GIAGLMLIASKAYADPTQFDQSSPYFDLKSTDEKPRWTAVDVKLVKKTRLLGLDEMRRVD CHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHH ELSGMRLLARGNRLSVMPVSVTEFDAICKILGI HHCCCEEEECCCEEEEEEECHHHHHHHHHHHCC >Mature Secondary Structure MRHWLLKSEPSEFGIDDLAQSSKQTAPWTGIRNYQARNFLRDESSVGDLAFFYHSSCPQP CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC GIAGLMLIASKAYADPTQFDQSSPYFDLKSTDEKPRWTAVDVKLVKKTRLLGLDEMRRVD CHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHH ELSGMRLLARGNRLSVMPVSVTEFDAICKILGI HHCCCEEEECCCEEEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA