| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782293
Identifier: 91782293
GI number: 91782293
Start: 1020105
End: 1021283
Strand: Reverse
Name: 91782293
Synonym: Bxe_A3540
Alternate gene names: NA
Gene position: 1021283-1020105 (Counterclockwise)
Preceding gene: 91782294
Following gene: 91782292
Centisome position: 20.86
GC content: 66.84
Gene sequence:
>1179_bases ATGACACGTTCGCTCAAAGGTCAGGTGGCGATCGTCGGCATCGGTGAAACGCCGTATTACCGTCACGGCAAGTCGCCGGA CAGCGAGTTCAAGCTCGCGTTGAAAGCCATACTCGCCGCCTGCGCCGACGCAGGCATCGATCCGCGCGACATCGACGGCT TCGCTTCATACGGCGACGACCGCAGCGAAGCATCGCGTCTCGCCGCTGCGCTCGGCACGCGGCGTCTGCGTTCGAGCACG ATGCAATGGGGCGGCGGTGGCGGTGGCTGTTGCGCCGCCGTCGCCAACGGCTCGGCGGCGATCGTCGCGGGGCTCGCCGA CTGCGTGGTCGTGTTCCGCTCGCTCGCCCAGGGCGAGCACGGCCGTTTCGGACGAACCACCGGCATCAATACGATTTCGG GCGAAAAGGCGTGGCTGATGCCGTACGGCGTGCTCGCGCCGCCACAACGCTTCGCGATGCGCGTGCGGCGCTTCATGCAC GAGCACGGCGTTCGCCAGGAAGCGCTGCGTGCCGTGGCGATGGCGTCGTACCATCACGCGCAGTCGAATCCACGCGCGGT GATGTACGGCAAACCGCTCGATGTCGAAAAGTACGAGTCGTCGCGCTGGATCGCGGAACCCTTTCATCTGTTCGACTGCT GCATGGAAAACGACGGCGCGGCCGCGCTGATTCTGGTGCCCGCCGAACGGGCCCGGGAATTCGGCGACAACGCGGCGTTC GTCCTCGGGGCCGCCGCGGGCTCGGATCATCGCTTCGCGGCAGCTCCGCACAACGGTCCCGCGTACGCCAGCGCCAACTT CGGTACGGTCGCCCCCGACCTGTTCCGGATGGCCGACATCGACCCGGGCGATATCGGCGTCGTGCAGAGCTACGAAAATT TCACGGGGGGCGTCGTGATGGCGCTGGCCGAGCACGGCTTCTTCGCGCCCGAAAACGCGAACGACTTCCTCACGCTCGAC AACCTGATCGCGCCGGACGGCCGCCTGCCGCTCAACACCAGCGGCGGCAATCTCGCCGAGTGCTACATGCATGGTTTCGA GCTGGTGCTGGAAGCGGTGCGGCAAGTGCGCGGCACCTCGTGCAACCAGGCGCGCCGGAACGACGTTGCGCTCGTGATCG GCGGCCCGATGGTCTCGCCGGTGAGCAGCCTGCTACTCGGATCGGAGGCAACACGATGA
Upstream 100 bases:
>100_bases CGGGACCAGGCATCATGTTTACAGGCTTGGGCGATGAATCCGGGACCGCCATTTCCAGTGCGGAATGGGGCCCATACGTC TGCATGGGAGACATCTACGC
Downstream 100 bases:
>100_bases AAGAAGCAAGCACGTCGCCGTATTACCTTCCTGCCGGACTGCCGGTTCCGGTCGCCGAACCGGACGGACTCTCTGCCCCC TACTGGCAGGCGTTGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTRSLKGQVAIVGIGETPYYRHGKSPDSEFKLALKAILAACADAGIDPRDIDGFASYGDDRSEASRLAAALGTRRLRSST MQWGGGGGGCCAAVANGSAAIVAGLADCVVVFRSLAQGEHGRFGRTTGINTISGEKAWLMPYGVLAPPQRFAMRVRRFMH EHGVRQEALRAVAMASYHHAQSNPRAVMYGKPLDVEKYESSRWIAEPFHLFDCCMENDGAAALILVPAERAREFGDNAAF VLGAAAGSDHRFAAAPHNGPAYASANFGTVAPDLFRMADIDPGDIGVVQSYENFTGGVVMALAEHGFFAPENANDFLTLD NLIAPDGRLPLNTSGGNLAECYMHGFELVLEAVRQVRGTSCNQARRNDVALVIGGPMVSPVSSLLLGSEATR
Sequences:
>Translated_392_residues MTRSLKGQVAIVGIGETPYYRHGKSPDSEFKLALKAILAACADAGIDPRDIDGFASYGDDRSEASRLAAALGTRRLRSST MQWGGGGGGCCAAVANGSAAIVAGLADCVVVFRSLAQGEHGRFGRTTGINTISGEKAWLMPYGVLAPPQRFAMRVRRFMH EHGVRQEALRAVAMASYHHAQSNPRAVMYGKPLDVEKYESSRWIAEPFHLFDCCMENDGAAALILVPAERAREFGDNAAF VLGAAAGSDHRFAAAPHNGPAYASANFGTVAPDLFRMADIDPGDIGVVQSYENFTGGVVMALAEHGFFAPENANDFLTLD NLIAPDGRLPLNTSGGNLAECYMHGFELVLEAVRQVRGTSCNQARRNDVALVIGGPMVSPVSSLLLGSEATR >Mature_391_residues TRSLKGQVAIVGIGETPYYRHGKSPDSEFKLALKAILAACADAGIDPRDIDGFASYGDDRSEASRLAAALGTRRLRSSTM QWGGGGGGCCAAVANGSAAIVAGLADCVVVFRSLAQGEHGRFGRTTGINTISGEKAWLMPYGVLAPPQRFAMRVRRFMHE HGVRQEALRAVAMASYHHAQSNPRAVMYGKPLDVEKYESSRWIAEPFHLFDCCMENDGAAALILVPAERAREFGDNAAFV LGAAAGSDHRFAAAPHNGPAYASANFGTVAPDLFRMADIDPGDIGVVQSYENFTGGVVMALAEHGFFAPENANDFLTLDN LIAPDGRLPLNTSGGNLAECYMHGFELVLEAVRQVRGTSCNQARRNDVALVIGGPMVSPVSSLLLGSEATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 41651; Mature: 41519
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSLKGQVAIVGIGETPYYRHGKSPDSEFKLALKAILAACADAGIDPRDIDGFASYGDD CCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC RSEASRLAAALGTRRLRSSTMQWGGGGGGCCAAVANGSAAIVAGLADCVVVFRSLAQGEH HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC GRFGRTTGINTISGEKAWLMPYGVLAPPQRFAMRVRRFMHEHGVRQEALRAVAMASYHHA CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC QSNPRAVMYGKPLDVEKYESSRWIAEPFHLFDCCMENDGAAALILVPAERAREFGDNAAF CCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCEE VLGAAAGSDHRFAAAPHNGPAYASANFGTVAPDLFRMADIDPGDIGVVQSYENFTGGVVM EEEECCCCCCEEEECCCCCCCEECCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHEE ALAEHGFFAPENANDFLTLDNLIAPDGRLPLNTSGGNLAECYMHGFELVLEAVRQVRGTS EEHHCCCCCCCCCCCCEEECCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC CNQARRNDVALVIGGPMVSPVSSLLLGSEATR CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC >Mature Secondary Structure TRSLKGQVAIVGIGETPYYRHGKSPDSEFKLALKAILAACADAGIDPRDIDGFASYGDD CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC RSEASRLAAALGTRRLRSSTMQWGGGGGGCCAAVANGSAAIVAGLADCVVVFRSLAQGEH HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC GRFGRTTGINTISGEKAWLMPYGVLAPPQRFAMRVRRFMHEHGVRQEALRAVAMASYHHA CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC QSNPRAVMYGKPLDVEKYESSRWIAEPFHLFDCCMENDGAAALILVPAERAREFGDNAAF CCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCEE VLGAAAGSDHRFAAAPHNGPAYASANFGTVAPDLFRMADIDPGDIGVVQSYENFTGGVVM EEEECCCCCCEEEECCCCCCCEECCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHEE ALAEHGFFAPENANDFLTLDNLIAPDGRLPLNTSGGNLAECYMHGFELVLEAVRQVRGTS EEHHCCCCCCCCCCCCEEECCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC CNQARRNDVALVIGGPMVSPVSSLLLGSEATR CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]