| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is bedC2 [H]
Identifier: 91782279
GI number: 91782279
Start: 1007769
End: 1008311
Strand: Direct
Name: bedC2 [H]
Synonym: Bxe_A3555
Alternate gene names: 91782279
Gene position: 1007769-1008311 (Clockwise)
Preceding gene: 91782278
Following gene: 91782280
Centisome position: 20.58
GC content: 58.75
Gene sequence:
>543_bases ATGAGCGCCGTTACCATCGGGAAGGACCCCGTTCGAATCCCGTCTTCCAGCGACTTCGCGGAATACGTGACGAGAACGGA CGTAGAAGATCTGCTGTACCACGAGGCAGAACTCCTCGACACCTGGCAGCTGCACGACTGGCTGTCGCTGTTCACCGCGG ATGGCACCTACTACGTGCCGTCGGCCGACCTGCCGCGTGACGCCAGCGCGGATGAGAGCCTCTTCTACATTGCGGACGAT CCGGTCCGATTGCGGGAGCGGGTGATCCGGTTGATGAAGAAGACCGCTCACTCGGAATATCCGCGATCACGTACCCGGCA CCTGGTGAGCAATATCCGCATTCTGGGTGCGGGTGCGGACGAGATCAAGGTTGCCGCAGCATTTGTGACCTACCGGATGA AATTTGGCAGCAATGATGCATACATAGGCAGTACACATTATCGCCTGCGCCGCGTGGATGGCCAGCTGCGTATTGTCGAA AAACGCTGCTTTCTGGATCTCGAAGCGCTTCGCCCGCACGGACGGGTGAGCATCATTCTCTGA
Upstream 100 bases:
>100_bases GCGTTCTGGACACGCTGGAATCAGTACATCAGCGGCTCGCCGTCTCCGCAGGCGACCATCCGCCGGCTCCCGTCAGCAAC CGCAGCCTGAGGATACGCAT
Downstream 100 bases:
>100_bases GGGGCTGACCATGGATATTACGCTTCCCTTCCGCTACAGGAAGCTCGGCTATGCCGCGATCAATGTGACTGACCTGGACC GGTCAGTCGCCTTCTACAGG
Product: p-cumate dioxygenase small subunit (CmtAc)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSAVTIGKDPVRIPSSSDFAEYVTRTDVEDLLYHEAELLDTWQLHDWLSLFTADGTYYVPSADLPRDASADESLFYIADD PVRLRERVIRLMKKTAHSEYPRSRTRHLVSNIRILGAGADEIKVAAAFVTYRMKFGSNDAYIGSTHYRLRRVDGQLRIVE KRCFLDLEALRPHGRVSIIL
Sequences:
>Translated_180_residues MSAVTIGKDPVRIPSSSDFAEYVTRTDVEDLLYHEAELLDTWQLHDWLSLFTADGTYYVPSADLPRDASADESLFYIADD PVRLRERVIRLMKKTAHSEYPRSRTRHLVSNIRILGAGADEIKVAAAFVTYRMKFGSNDAYIGSTHYRLRRVDGQLRIVE KRCFLDLEALRPHGRVSIIL >Mature_179_residues SAVTIGKDPVRIPSSSDFAEYVTRTDVEDLLYHEAELLDTWQLHDWLSLFTADGTYYVPSADLPRDASADESLFYIADDP VRLRERVIRLMKKTAHSEYPRSRTRHLVSNIRILGAGADEIKVAAAFVTYRMKFGSNDAYIGSTHYRLRRVDGQLRIVEK RCFLDLEALRPHGRVSIIL
Specific function: The beta subunit may be responsible for the substrate specificity of the enzyme [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
Organism=Escherichia coli, GI1788889, Length=156, Percent_Identity=28.8461538461538, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.3 [H]
Molecular weight: Translated: 20603; Mature: 20471
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVTIGKDPVRIPSSSDFAEYVTRTDVEDLLYHEAELLDTWQLHDWLSLFTADGTYYVP CCCEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC SADLPRDASADESLFYIADDPVRLRERVIRLMKKTAHSEYPRSRTRHLVSNIRILGAGAD CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCC EIKVAAAFVTYRMKFGSNDAYIGSTHYRLRRVDGQLRIVEKRCFLDLEALRPHGRVSIIL HHHHHHHHHEEEEEECCCCCEECCCCEEEEECCCCEEEEEHHHHEEHHHCCCCCCEEEEC >Mature Secondary Structure SAVTIGKDPVRIPSSSDFAEYVTRTDVEDLLYHEAELLDTWQLHDWLSLFTADGTYYVP CCEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC SADLPRDASADESLFYIADDPVRLRERVIRLMKKTAHSEYPRSRTRHLVSNIRILGAGAD CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCC EIKVAAAFVTYRMKFGSNDAYIGSTHYRLRRVDGQLRIVEKRCFLDLEALRPHGRVSIIL HHHHHHHHHEEEEEECCCCCEECCCCEEEEECCCCEEEEEHHHHEEHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8344526 [H]