| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is xylA [H]
Identifier: 91782275
GI number: 91782275
Start: 1002324
End: 1003373
Strand: Direct
Name: xylA [H]
Synonym: Bxe_A3559
Alternate gene names: 91782275
Gene position: 1002324-1003373 (Clockwise)
Preceding gene: 91782274
Following gene: 91782276
Centisome position: 20.47
GC content: 59.33
Gene sequence:
>1050_bases ATGCGAGACTTCCTGAAATCCGCTTTTGGCAGATCGAAGCCAAAGCAGCTCCGAATCCTGCCCCAGGACGTGACGATCGA GATCGGGCAAGGGCAGACGCTGCTTGAAGCTGCGCTTGCCAACGGTATTGCCTATCCGCACGATTGCACCGTTGGCACCT GTGCGTCCTGCAAGACCCGTCTGAAGCAGGGGCGGGTACGCGAAGCAACTCCTTTTGGCTACACGCTCTCAAAGGACGAA CTCGACGCAGGATACATCCTTGCCTGCCAGGCGTTTCCAAAGGACGAACTGACGGTTGTCGAGATTGATTCCTCGGCCGG GGATCTGATGCCTGCCGAGAAATACACCGCCAATATCATCGCGACTGAGCCCCTCACGCACGACATCCTGAGAGTGACAG TGCAGACGGATCGGGCAGTCAGCTATGCCGCCGGGCAGTACGCAAATTTACGCAAGGCTGGCGGCGGTCGTGCGCGGTCG TATTCCTTCGCGAATGCACCTCAGCGCAAGGGCAGGACACTCCTCGAGTTCTATATTCGCAAGGTGCCGGGTGGCGAATT CACCGAATCGCTCTTTGGAGGGGAACTCAAGGGGGTGTCGCTCGAGATGGAAGCACCGCTGGGCACTTTTCATCTGCGTG CCGGCGATTCCCACATGGTATGCATCGCTGGCGGCAGTGGTCTCGCGCCGCTGGTCAGCATACTCGAGCATGCGCGAGGC AATCGTATCAAACGCGATTGCACGCTCCTGTTTGGCGCGAGGACCCAGGCTGATCTCTACCAGCTTGATGCAATCGGGAG CATCGCCAGCAACTGGCAAGGGGACTTCCGTTTTATTCCGGTCCTCTCAGACGAGCCGCTGGACAGTGACTGGAAGGGGG CAAGAGGGCTGGTCACCGATCATATCGCGCCCGGATTCTGCGAGGGGGGCGAGGGGTACCTGTGTGGTCCGCCTCTCATG ATCGACGCCGCCATCGCAAGCCTCGCGAAGCACGGCATCCCTCTCGAGAAGGTGTTTTACGACAAGTTCACCGATAGCCG TGACCGCTAA
Upstream 100 bases:
>100_bases TGGTATTCGCCGTCATTTCCATCGTCGTGGTTGTCGTATTAGCTGGACAGTCATTTCGACGTCTGGCATGGCCAGCGACA CAGAATATTAGTGGTGTTTG
Downstream 100 bases:
>100_bases CTAACCGATCTCGACAACAAGAGCGAAGATCCGGAGGAGACAAGAGATGAAGACGAAATATGTTGCTGTGGCGACAGGGT GCCTCGTTGTTATGCTCTGG
Product: p-cymene monooxygenase, reductase subunit(CymAb)
Products: NA
Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTRLKQGRVREATPFGYTLSKDE LDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANIIATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARS YSFANAPQRKGRTLLEFYIRKVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTDHIAPGFCEGGEGYLCGPPLM IDAAIASLAKHGIPLEKVFYDKFTDSRDR
Sequences:
>Translated_349_residues MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTRLKQGRVREATPFGYTLSKDE LDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANIIATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARS YSFANAPQRKGRTLLEFYIRKVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTDHIAPGFCEGGEGYLCGPPLM IDAAIASLAKHGIPLEKVFYDKFTDSRDR >Mature_349_residues MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTRLKQGRVREATPFGYTLSKDE LDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANIIATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARS YSFANAPQRKGRTLLEFYIRKVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTDHIAPGFCEGGEGYLCGPPLM IDAAIASLAKHGIPLEKVFYDKFTDSRDR
Specific function: Oxidizes toluene and xylenes to (methyl)benzyl alcohols. The enzyme has a broad specificity and also oxidizes (methyl)benzyl alcohols to (methyl)benzaldehydes and indole to indoxyl [H]
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=184, Percent_Identity=27.7173913043478, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1787658, Length=73, Percent_Identity=42.4657534246575, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.3 [H]
Molecular weight: Translated: 37851; Mature: 37851
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTR CHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LKQGRVREATPFGYTLSKDELDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANII HHCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHEEEEE ATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARSYSFANAPQRKGRTLLEFYIR EECCCCCEEEEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHH KVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG HCCCCHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCC NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTD CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH HIAPGFCEGGEGYLCGPPLMIDAAIASLAKHGIPLEKVFYDKFTDSRDR CCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MRDFLKSAFGRSKPKQLRILPQDVTIEIGQGQTLLEAALANGIAYPHDCTVGTCASCKTR CHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LKQGRVREATPFGYTLSKDELDAGYILACQAFPKDELTVVEIDSSAGDLMPAEKYTANII HHCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHEEEEE ATEPLTHDILRVTVQTDRAVSYAAGQYANLRKAGGGRARSYSFANAPQRKGRTLLEFYIR EECCCCCEEEEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHH KVPGGEFTESLFGGELKGVSLEMEAPLGTFHLRAGDSHMVCIAGGSGLAPLVSILEHARG HCCCCHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCC NRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGDFRFIPVLSDEPLDSDWKGARGLVTD CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH HIAPGFCEGGEGYLCGPPLMIDAAIASLAKHGIPLEKVFYDKFTDSRDR CCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1999388 [H]