Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is fdxB [H]

Identifier: 91782243

GI number: 91782243

Start: 964829

End: 965149

Strand: Reverse

Name: fdxB [H]

Synonym: Bxe_A3592

Alternate gene names: 91782243

Gene position: 965149-964829 (Counterclockwise)

Preceding gene: 91782244

Following gene: 91782242

Centisome position: 19.71

GC content: 61.37

Gene sequence:

>321_bases
ATGCCAACTATTCATTTCATCACATACAACGGCGAAACACACAGCGTCGTCGGAGCCGAAGGCGCTTCCGTCATGTCGGT
TGCACAGCAGAACAACGTTCCCGGCATCGACGGCGACTGCGGCGGCGTCTGTGCGTGCGCCACGTGTCATGTTTACGTCG
ATCCAGACTGGAGCGATCGCGTGGGCGGGCGCGGCGACCAGGAGGATTCCATGCTGACCTTTTCACCGATCCTCAGGGAC
AACTCGCGGCTCTCCTGCCAGATCGCGGTGCGCGAGGAACTCGACGGACTGGTCCTGCACCTTCCCGAAGGCCAGCACTG
A

Upstream 100 bases:

>100_bases
CTGAAAGCCCTCATGGATGACGCACTCACACGCGCCTGATCTCATCCACACGAATATCGGATTGCCCGAGAACACTACAC
GATTTCACAAGGAGACAGCC

Downstream 100 bases:

>100_bases
CCACGCTTGCCCGACACTCAAATCCCGTTCCAGACAAGGCGCTCGCCCCGCTCACGCGGAATTGCCATTCAGCCAAGGTG
AATTGTATGAATACCCTCGT

Product: putative ferredoxin

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MPTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDRVGGRGDQEDSMLTFSPILRD
NSRLSCQIAVREELDGLVLHLPEGQH

Sequences:

>Translated_106_residues
MPTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDRVGGRGDQEDSMLTFSPILRD
NSRLSCQIAVREELDGLVLHLPEGQH
>Mature_105_residues
PTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDRVGGRGDQEDSMLTFSPILRDN
SRLSCQIAVREELDGLVLHLPEGQH

Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=98, Percent_Identity=39.7959183673469, Blast_Score=74, Evalue=3e-14,
Organism=Homo sapiens, GI4758352, Length=103, Percent_Identity=36.8932038834951, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17544202, Length=99, Percent_Identity=39.3939393939394, Blast_Score=85, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6325004, Length=100, Percent_Identity=40, Blast_Score=82, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24661503, Length=101, Percent_Identity=35.6435643564356, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281365644, Length=102, Percent_Identity=36.2745098039216, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11356; Mature: 11225

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDR
CCEEEEEEECCCCCEEECCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCC
VGGRGDQEDSMLTFSPILRDNSRLSCQIAVREELDGLVLHLPEGQH
CCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCC
>Mature Secondary Structure 
PTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDR
CEEEEEEECCCCCEEECCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCC
VGGRGDQEDSMLTFSPILRDNSRLSCQIAVREELDGLVLHLPEGQH
CCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]