| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fdxB [H]
Identifier: 91782243
GI number: 91782243
Start: 964829
End: 965149
Strand: Reverse
Name: fdxB [H]
Synonym: Bxe_A3592
Alternate gene names: 91782243
Gene position: 965149-964829 (Counterclockwise)
Preceding gene: 91782244
Following gene: 91782242
Centisome position: 19.71
GC content: 61.37
Gene sequence:
>321_bases ATGCCAACTATTCATTTCATCACATACAACGGCGAAACACACAGCGTCGTCGGAGCCGAAGGCGCTTCCGTCATGTCGGT TGCACAGCAGAACAACGTTCCCGGCATCGACGGCGACTGCGGCGGCGTCTGTGCGTGCGCCACGTGTCATGTTTACGTCG ATCCAGACTGGAGCGATCGCGTGGGCGGGCGCGGCGACCAGGAGGATTCCATGCTGACCTTTTCACCGATCCTCAGGGAC AACTCGCGGCTCTCCTGCCAGATCGCGGTGCGCGAGGAACTCGACGGACTGGTCCTGCACCTTCCCGAAGGCCAGCACTG A
Upstream 100 bases:
>100_bases CTGAAAGCCCTCATGGATGACGCACTCACACGCGCCTGATCTCATCCACACGAATATCGGATTGCCCGAGAACACTACAC GATTTCACAAGGAGACAGCC
Downstream 100 bases:
>100_bases CCACGCTTGCCCGACACTCAAATCCCGTTCCAGACAAGGCGCTCGCCCCGCTCACGCGGAATTGCCATTCAGCCAAGGTG AATTGTATGAATACCCTCGT
Product: putative ferredoxin
Products: NA
Alternate protein names: FdII [H]
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MPTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDRVGGRGDQEDSMLTFSPILRD NSRLSCQIAVREELDGLVLHLPEGQH
Sequences:
>Translated_106_residues MPTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDRVGGRGDQEDSMLTFSPILRD NSRLSCQIAVREELDGLVLHLPEGQH >Mature_105_residues PTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDRVGGRGDQEDSMLTFSPILRDN SRLSCQIAVREELDGLVLHLPEGQH
Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI72534754, Length=98, Percent_Identity=39.7959183673469, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI4758352, Length=103, Percent_Identity=36.8932038834951, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17544202, Length=99, Percent_Identity=39.3939393939394, Blast_Score=85, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6325004, Length=100, Percent_Identity=40, Blast_Score=82, Evalue=2e-17, Organism=Drosophila melanogaster, GI24661503, Length=101, Percent_Identity=35.6435643564356, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI281365644, Length=102, Percent_Identity=36.2745098039216, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001055 - InterPro: IPR018298 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2 [H]
EC number: NA
Molecular weight: Translated: 11356; Mature: 11225
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDR CCEEEEEEECCCCCEEECCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCC VGGRGDQEDSMLTFSPILRDNSRLSCQIAVREELDGLVLHLPEGQH CCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCC >Mature Secondary Structure PTIHFITYNGETHSVVGAEGASVMSVAQQNNVPGIDGDCGGVCACATCHVYVDPDWSDR CEEEEEEECCCCCEEECCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCC VGGRGDQEDSMLTFSPILRDNSRLSCQIAVREELDGLVLHLPEGQH CCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: 2Fe-2S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751304; 11259647 [H]