| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is lip2 [H]
Identifier: 91782229
GI number: 91782229
Start: 948645
End: 949598
Strand: Direct
Name: lip2 [H]
Synonym: Bxe_A3606
Alternate gene names: 91782229
Gene position: 948645-949598 (Clockwise)
Preceding gene: 91782228
Following gene: 91782230
Centisome position: 19.38
GC content: 61.43
Gene sequence:
>954_bases ATGGAACCCGAGCTGAAGGCGTTGATAGAACAACTAAGCCAGGCAGGGCGGCGGCCGTTCTGGCAGTGCACTGTCGACGA CGCGCGCAATGCGCCGACACTGGTTAAGCGTCTCTTTCCCGATGCGCCGTCTGTCGAACGGACGCAGGACATCCGCATTT CTTCCACGCGCGGTCATGCATTTCCGGCACGGCTCTACGTGCCGCGTGACAGGCCATGCGGCCTGATTGTCTATCTGCAT GGCGGCGGCTGGGTCGTCGGTTCTGTCGACGACTATCATCCGCTCACTGCCACGATCACGGCGAGGAGCGGATTTGCCGT GTTATCGGTGGACTATCGTCTTGCTCCGGAGCACGCGTTTCCCATTCCGCTGGAAGACGCGCGTGCCGCGTTGGAATGGG CGTCGTCAGGCTCCGCCGCGGTGGCAATTGGTGCGGACGTGAATTGTCTAATCGTGATGGGCGACAGCGCGGGAGCGAAT CTGGCCACCGTCGCTGCGCGCCTGCATAACGAAAAAAATATTGATCGGCGCGTGGACGGGCAGGTGCTCGTGTATCCGGT TACAGGACATGATTTCAAAACCGCCAGCTACGACGAGTTCGCCGAAGGCAATCTGCTTACGCGAAACGACATGCAGTGGT TCTGGGATCACTACTGTCCCGAACGGGCGGCGCGCGCGAATCCTCTCGCTTCACCGCTCGAAGCGGAAGATCTGAGCATG TCGCCGCCCGCGCTCGTCATGACGGCCGGACGCGATCCGCTACGCGACGAAGGGGAAGCTTATGGCGCACGTCTTCGGAA GGCGGGTGTCGATGTTGCAGTCGTCCGATGTGACGGGCTTGTGCACGGCTTTCTCGCGATGATCCACCAGGTCCCCGGCG CCGCAAGGGCGTTCGACAGGATCGTCGATTACATCACCCGGTTAGGCGAAGCAGTACCAGAGGCTCGACGCTAG
Upstream 100 bases:
>100_bases TGGATATGCCGGTAGCCGAGGTCAGCGTGCTGGCGCGCAGCAGCGAGCAGGCGCCCTGACACCGCAAAACGGAAACGGCG TCTCGCTGAAAAGGATGCGA
Downstream 100 bases:
>100_bases CGCACACCTCGCATCTGCGGCATCTCCGGCGCGCATAGTCGCGCCTTTCTCCGTTTTCCACTCCCAGAAAAGCGACCAGT GCGACCGGGCAAGACCAGCG
Product: putative esterase/lipase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MEPELKALIEQLSQAGRRPFWQCTVDDARNAPTLVKRLFPDAPSVERTQDIRISSTRGHAFPARLYVPRDRPCGLIVYLH GGGWVVGSVDDYHPLTATITARSGFAVLSVDYRLAPEHAFPIPLEDARAALEWASSGSAAVAIGADVNCLIVMGDSAGAN LATVAARLHNEKNIDRRVDGQVLVYPVTGHDFKTASYDEFAEGNLLTRNDMQWFWDHYCPERAARANPLASPLEAEDLSM SPPALVMTAGRDPLRDEGEAYGARLRKAGVDVAVVRCDGLVHGFLAMIHQVPGAARAFDRIVDYITRLGEAVPEARR
Sequences:
>Translated_317_residues MEPELKALIEQLSQAGRRPFWQCTVDDARNAPTLVKRLFPDAPSVERTQDIRISSTRGHAFPARLYVPRDRPCGLIVYLH GGGWVVGSVDDYHPLTATITARSGFAVLSVDYRLAPEHAFPIPLEDARAALEWASSGSAAVAIGADVNCLIVMGDSAGAN LATVAARLHNEKNIDRRVDGQVLVYPVTGHDFKTASYDEFAEGNLLTRNDMQWFWDHYCPERAARANPLASPLEAEDLSM SPPALVMTAGRDPLRDEGEAYGARLRKAGVDVAVVRCDGLVHGFLAMIHQVPGAARAFDRIVDYITRLGEAVPEARR >Mature_317_residues MEPELKALIEQLSQAGRRPFWQCTVDDARNAPTLVKRLFPDAPSVERTQDIRISSTRGHAFPARLYVPRDRPCGLIVYLH GGGWVVGSVDDYHPLTATITARSGFAVLSVDYRLAPEHAFPIPLEDARAALEWASSGSAAVAIGADVNCLIVMGDSAGAN LATVAARLHNEKNIDRRVDGQVLVYPVTGHDFKTASYDEFAEGNLLTRNDMQWFWDHYCPERAARANPLASPLEAEDLSM SPPALVMTAGRDPLRDEGEAYGARLRKAGVDVAVVRCDGLVHGFLAMIHQVPGAARAFDRIVDYITRLGEAVPEARR
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=327, Percent_Identity=27.5229357798165, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI206597554, Length=299, Percent_Identity=27.7591973244147, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI157041239, Length=334, Percent_Identity=25.4491017964072, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI68051721, Length=147, Percent_Identity=29.2517006802721, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI61966717, Length=336, Percent_Identity=23.2142857142857, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1786682, Length=263, Percent_Identity=26.615969581749, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17567059, Length=270, Percent_Identity=29.6296296296296, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71996133, Length=143, Percent_Identity=35.6643356643357, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17540028, Length=143, Percent_Identity=35.6643356643357, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI72001146, Length=154, Percent_Identity=34.4155844155844, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115533410, Length=112, Percent_Identity=37.5, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533412, Length=112, Percent_Identity=37.5, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 34667; Mature: 34667
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPELKALIEQLSQAGRRPFWQCTVDDARNAPTLVKRLFPDAPSVERTQDIRISSTRGHA CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCC FPARLYVPRDRPCGLIVYLHGGGWVVGSVDDYHPLTATITARSGFAVLSVDYRLAPEHAF CEEEEECCCCCCCEEEEEEECCCEEEECCCCCCCEEEEEEECCCEEEEEEEEEECCCCCC PIPLEDARAALEWASSGSAAVAIGADVNCLIVMGDSAGANLATVAARLHNEKNIDRRVDG CCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC QVLVYPVTGHDFKTASYDEFAEGNLLTRNDMQWFWDHYCPERAARANPLASPLEAEDLSM CEEEEEECCCCCCCCCCCHHCCCCEEECCCHHHHHHHHCHHHHHCCCCCCCCCCCCCCCC SPPALVMTAGRDPLRDEGEAYGARLRKAGVDVAVVRCDGLVHGFLAMIHQVPGAARAFDR CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHH IVDYITRLGEAVPEARR HHHHHHHHHHHCCCCCC >Mature Secondary Structure MEPELKALIEQLSQAGRRPFWQCTVDDARNAPTLVKRLFPDAPSVERTQDIRISSTRGHA CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCC FPARLYVPRDRPCGLIVYLHGGGWVVGSVDDYHPLTATITARSGFAVLSVDYRLAPEHAF CEEEEECCCCCCCEEEEEEECCCEEEECCCCCCCEEEEEEECCCEEEEEEEEEECCCCCC PIPLEDARAALEWASSGSAAVAIGADVNCLIVMGDSAGANLATVAARLHNEKNIDRRVDG CCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC QVLVYPVTGHDFKTASYDEFAEGNLLTRNDMQWFWDHYCPERAARANPLASPLEAEDLSM CEEEEEECCCCCCCCCCCHHCCCCEEECCCHHHHHHHHCHHHHHCCCCCCCCCCCCCCCC SPPALVMTAGRDPLRDEGEAYGARLRKAGVDVAVVRCDGLVHGFLAMIHQVPGAARAFDR CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHH IVDYITRLGEAVPEARR HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]