| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is ilvD2 [H]
Identifier: 91782200
GI number: 91782200
Start: 923594
End: 925267
Strand: Reverse
Name: ilvD2 [H]
Synonym: Bxe_A3634
Alternate gene names: 91782200
Gene position: 925267-923594 (Counterclockwise)
Preceding gene: 91782203
Following gene: 91782199
Centisome position: 18.9
GC content: 64.4
Gene sequence:
>1674_bases ATGCCATACAACCGTCGTTCGAAGAACATCACGCAAGGTGTAGCGCGTTCGCCGAATCGCTCGATGTACTACGCGCTCGG CTACGAAAAAGCCGACTTCGACAAGCCGATGATCGGCATCGCCAACGGTCACTCGACCATCACGCCGTGCAACGCGGGCC TGCAGCGTCTCGCCGATGCCGCGGTCGCCGCGATCAAAGGCGCCGACGCGAACCCACAGATCTTCGGCACGCCGACGATC TCGGACGGCATGTCGATGGGCACCGAGGGCATGAAGTACTCGCTGGTGTCGCGCGAAGTGATTTCCGACTGCATCGAGAC CTGCGTGCAAGGCCAGTGGATGGACGGCGTGGTCGTGATCGGCGGCTGCGACAAGAACATGCCGGGCGGCATGATCGGCA TGCTGCGCACCAACGTGCCGAGCATCTACGTGTATGGCGGGACGATTCGTCCGGGCAACTGGAAGGGCACCGACCTGACC ATCGTGTCGTCGTTCGAGGCCGTGGGCGAATTCACCGCCGGCCGGATGTCGCAGGAAGATTTCGAAGGGGTCGAACAGAA CGCGTGCCCATCCACCGGGTCGTGCGGCGGCATGTACACCGCCAACACCATGAGCTCGTCGTTCGAAGCGCTCGGCATGT CGCTGCTGTATTCGTCCACAATGGCCAATCCGGATCAGGAAAAAGTCGACTCGGCCGCCGAATCGGCACGCGTGCTGGTC GAAGCGGTCAAGCAGGATCTCAAGCCGCGCGACATCGTGACCCGCAAGTCGATCGAAAACGCCGTGGCCGTGATCATGGC CACCGGCGGCTCGACCAATGCCGTGCTGCACTTTCTCGCCATCGCGCATGCGGCCGAAGTGGAGTGGAGCATCGAGGACT TCGAGCGCATGCGCAAGAAGGTGCCGGTGATCTGCAACCTGAAGCCGTCGGGCCAGTTCGTGGCGACCGATCTGCACAAG GCCGGCGGCATTCCGCAAGTCATGAAGATCCTGCTCGACGCAGGTCTGTTGCACGGCGATTGCATCACGATCACCGGCCG AACCCTCGCGGAAGAGTTGAAGGACGTGCCGGCCAGGCCGCGCGCCGATCAGCAGGTGATTTTCCCGATCGAGCAGGCGC TGTACAAGGAAGGCCATCTCGCGATCCTCAAGGGCAACCTGGCCGTGGACGGCGCGGTCGCCAAGATCACCGGCCTGAAG AATCCCGTGATCACCGGCCCGGCGCGCGTGTTCGACGACGAGCAAAGCGCGCTGGAAGCGATTCTGGCCGACAGGATCGT CGCGGGCGACGTGGTGGTGCTGCGCTATCTCGGCCCGAAGGGCGGCCCCGGCATGCCGGAGATGCTCGCGCCGACCTCGG CGATCATCGGCAAGGGACTCGGCGAGAGCGTGGGGCTCATCACCGACGGGCGCTTCTCGGGTGGCACGTGGGGCATGGTG GTCGGGCACGTCGCGCCGGAAGCCTTCGTGGGCGGCACGATCGCGTTCGTGCAGGAAGGCGACTCGATCACCATCGACGC GCACAAGCTGCTGCTGCAACTGAATATCGACGACGCCGAACTGGAGCGACGCCGTGCCGCATGGCAGCAGCCGAAGCCGC GCTACACACGCGGCGTGCTGGCGAAGTACTCCGCATTGGCTCTGCCGGCCAATAAGGGCGCCGTGACGGGCTAA
Upstream 100 bases:
>100_bases GCGGCGCGCCGGAACTACACTGAACGGATGCGGCCAGGCCACCCACGCCGGCACGGCAGGACCCGCAGCGCGGACCAAAA CAGAACAGACTGGAGCTCCC
Downstream 100 bases:
>100_bases AGCTGCGTTCAGCGGATACGTCAGCGGCCCTGCGAGTACGCGCCTGGCTACGTAAAAGCGAAAGGGGCGGACGGGAAACC GTGCGCCCCTTTCCTTTTAT
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD 2 [H]
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MPYNRRSKNITQGVARSPNRSMYYALGYEKADFDKPMIGIANGHSTITPCNAGLQRLADAAVAAIKGADANPQIFGTPTI SDGMSMGTEGMKYSLVSREVISDCIETCVQGQWMDGVVVIGGCDKNMPGGMIGMLRTNVPSIYVYGGTIRPGNWKGTDLT IVSSFEAVGEFTAGRMSQEDFEGVEQNACPSTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLV EAVKQDLKPRDIVTRKSIENAVAVIMATGGSTNAVLHFLAIAHAAEVEWSIEDFERMRKKVPVICNLKPSGQFVATDLHK AGGIPQVMKILLDAGLLHGDCITITGRTLAEELKDVPARPRADQQVIFPIEQALYKEGHLAILKGNLAVDGAVAKITGLK NPVITGPARVFDDEQSALEAILADRIVAGDVVVLRYLGPKGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMV VGHVAPEAFVGGTIAFVQEGDSITIDAHKLLLQLNIDDAELERRRAAWQQPKPRYTRGVLAKYSALALPANKGAVTG
Sequences:
>Translated_557_residues MPYNRRSKNITQGVARSPNRSMYYALGYEKADFDKPMIGIANGHSTITPCNAGLQRLADAAVAAIKGADANPQIFGTPTI SDGMSMGTEGMKYSLVSREVISDCIETCVQGQWMDGVVVIGGCDKNMPGGMIGMLRTNVPSIYVYGGTIRPGNWKGTDLT IVSSFEAVGEFTAGRMSQEDFEGVEQNACPSTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLV EAVKQDLKPRDIVTRKSIENAVAVIMATGGSTNAVLHFLAIAHAAEVEWSIEDFERMRKKVPVICNLKPSGQFVATDLHK AGGIPQVMKILLDAGLLHGDCITITGRTLAEELKDVPARPRADQQVIFPIEQALYKEGHLAILKGNLAVDGAVAKITGLK NPVITGPARVFDDEQSALEAILADRIVAGDVVVLRYLGPKGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMV VGHVAPEAFVGGTIAFVQEGDSITIDAHKLLLQLNIDDAELERRRAAWQQPKPRYTRGVLAKYSALALPANKGAVTG >Mature_556_residues PYNRRSKNITQGVARSPNRSMYYALGYEKADFDKPMIGIANGHSTITPCNAGLQRLADAAVAAIKGADANPQIFGTPTIS DGMSMGTEGMKYSLVSREVISDCIETCVQGQWMDGVVVIGGCDKNMPGGMIGMLRTNVPSIYVYGGTIRPGNWKGTDLTI VSSFEAVGEFTAGRMSQEDFEGVEQNACPSTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLVE AVKQDLKPRDIVTRKSIENAVAVIMATGGSTNAVLHFLAIAHAAEVEWSIEDFERMRKKVPVICNLKPSGQFVATDLHKA GGIPQVMKILLDAGLLHGDCITITGRTLAEELKDVPARPRADQQVIFPIEQALYKEGHLAILKGNLAVDGAVAKITGLKN PVITGPARVFDDEQSALEAILADRIVAGDVVVLRYLGPKGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMVV GHVAPEAFVGGTIAFVQEGDSITIDAHKLLLQLNIDDAELERRRAAWQQPKPRYTRGVLAKYSALALPANKGAVTG
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=604, Percent_Identity=37.4172185430464, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1786464, Length=470, Percent_Identity=34.8936170212766, Blast_Score=198, Evalue=7e-52, Organism=Escherichia coli, GI2367371, Length=490, Percent_Identity=33.8775510204082, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1788157, Length=484, Percent_Identity=31.6115702479339, Blast_Score=189, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6322476, Length=560, Percent_Identity=44.4642857142857, Blast_Score=485, Evalue=1e-138,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 59134; Mature: 59002
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYNRRSKNITQGVARSPNRSMYYALGYEKADFDKPMIGIANGHSTITPCNAGLQRLADA CCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH AVAAIKGADANPQIFGTPTISDGMSMGTEGMKYSLVSREVISDCIETCVQGQWMDGVVVI HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEE GGCDKNMPGGMIGMLRTNVPSIYVYGGTIRPGNWKGTDLTIVSSFEAVGEFTAGRMSQED ECCCCCCCCCEEEHEECCCCEEEEECCEECCCCCCCCCEEEEECHHHHHHHHHCCCCHHH FEGVEQNACPSTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLV HHCHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EAVKQDLKPRDIVTRKSIENAVAVIMATGGSTNAVLHFLAIAHAAEVEWSIEDFERMRKK HHHHHCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCEECHHHHHHHHHC VPVICNLKPSGQFVATDLHKAGGIPQVMKILLDAGLLHGDCITITGRTLAEELKDVPARP CCEEEEECCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCC RADQQVIFPIEQALYKEGHLAILKGNLAVDGAVAKITGLKNPVITGPARVFDDEQSALEA CCCCEEEEHHHHHHHCCCCEEEEECCEEECCHHHEECCCCCCCEECCHHHCCCHHHHHHH ILADRIVAGDVVVLRYLGPKGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMV HHHHHHHHCCEEEEEEECCCCCCCCCHHHCCHHHHHHCCCCCCCCEEECCCCCCCCHHEE VGHVAPEAFVGGTIAFVQEGDSITIDAHKLLLQLNIDDAELERRRAAWQQPKPRYTRGVL EECCCCHHHCCCEEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHH AKYSALALPANKGAVTG HHHHHEEECCCCCCCCC >Mature Secondary Structure PYNRRSKNITQGVARSPNRSMYYALGYEKADFDKPMIGIANGHSTITPCNAGLQRLADA CCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH AVAAIKGADANPQIFGTPTISDGMSMGTEGMKYSLVSREVISDCIETCVQGQWMDGVVVI HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEE GGCDKNMPGGMIGMLRTNVPSIYVYGGTIRPGNWKGTDLTIVSSFEAVGEFTAGRMSQED ECCCCCCCCCEEEHEECCCCEEEEECCEECCCCCCCCCEEEEECHHHHHHHHHCCCCHHH FEGVEQNACPSTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLV HHCHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EAVKQDLKPRDIVTRKSIENAVAVIMATGGSTNAVLHFLAIAHAAEVEWSIEDFERMRKK HHHHHCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCEECHHHHHHHHHC VPVICNLKPSGQFVATDLHKAGGIPQVMKILLDAGLLHGDCITITGRTLAEELKDVPARP CCEEEEECCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCC RADQQVIFPIEQALYKEGHLAILKGNLAVDGAVAKITGLKNPVITGPARVFDDEQSALEA CCCCEEEEHHHHHHHCCCCEEEEECCEEECCHHHEECCCCCCCEECCHHHCCCHHHHHHH ILADRIVAGDVVVLRYLGPKGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMV HHHHHHHHCCEEEEEEECCCCCCCCCHHHCCHHHHHHCCCCCCCCEEECCCCCCCCHHEE VGHVAPEAFVGGTIAFVQEGDSITIDAHKLLLQLNIDDAELERRRAAWQQPKPRYTRGVL EECCCCHHHCCCEEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHH AKYSALALPANKGAVTG HHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA