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The map label for this gene is lptF [H]

Identifier: 91782195

GI number: 91782195

Start: 918769

End: 919866

Strand: Reverse

Name: lptF [H]

Synonym: Bxe_A3639

Alternate gene names: 91782195

Gene position: 919866-918769 (Counterclockwise)

Preceding gene: 91782199

Following gene: 91782194

Centisome position: 18.79

GC content: 61.57

Gene sequence:

>1098_bases
ATGATCTTCGAACGCTCCCTCCAGCGCGAACTCGCGTATACGGCTGGTGCCGTGTTCATGGTTCTCCTCACGCTCGTGCT
GACGACGATGATGATCCGTATCGTCGGCTTCGCGGCCTCGGGCGAGATCGACCCGCGCGACGTGCTGGTCCTGATCGGCC
TGACCGTGATCGGCTACCTGGCGATCATGCTCGTCGCGACCCTGTTCGTGTCGATCCTGTTCGTCCTGACCCGTTGGTAC
AAAGACTCCGAGATGGTCGTGTGGCTCTCGTCCGGTGTCAGTCTGACGCAATTCATCAAGCCGATCGGCATTTTTGCCAC
GCCGATCATCATCCTCATCATGTTCTTCGTGTTCGTCGGCTGGCCGTGGTCGAACCAGCAGAGCAAGCTGATCCGCGCGC
GCTTCCAGCAGCGCGACGAGGTCTCGCTGCTCGCGCCGGGTCAGTTCCGCGAATCGGCCACCAGCCACCGCGTGTTCTTC
ATCGAGAAGATGTCGCCCGACCAGGCGCGCGTCGAGAACGTGTTCGTGACCAGCACGGAGAACGGCAAGGTCAACGTGGT
CGTGTCGAAGACCGGCCATACGGAAACGCGTAAGAACGGCGATCGCTTCGTCGTGCTGGAAAACGGCCGACGTTACGACG
GCCAGCCGGGTCAGCCCGATTTCCGCATCATGGAGTTCGAACGCTATGGCGTGAAGATTCAGAGCCAGCCGGTCGTCAAT
ACGCCGACCACCACCGGCACGCCTACGCTCACGCTGCTGCGCAATCCCACCGACGACAATCTTGCCGAATTCGCGTGGCG
CGCGGGGTTGCCGCTGATTGCGCTCAACCTGATGCTGCTCGCCATTCCGCTCGCGCACCAGAACCCGCGGCGCAGCCGCA
CCATCAATCTGGTGATGGCGGTGCTCATCTATCTGACGTATTCGAATCTGTTGAACGTGGTGCAGTCGTGGATCGAGCAG
GGCAAGATGTCGTTCCCAGTCGGGCTGGTGGGCCTACATGTGATCGTCGCGGCGATCGTCGCGTTCATTTTCTGGCTGCG
CGTGCGCAACCGGCCGCTATTCACGCGGGCAATGTTCAGCCGTTCGCAGGGAGCCTGA

Upstream 100 bases:

>100_bases
AAGCCGCAATTATCCGCTATTTTTCCCGCGGCGGCTGCACCGGAGGTGTGACGGGAAGCAACCCGTGCGCCACTGAGAGC
GCCCCCTCTCATCATCAATA

Downstream 100 bases:

>100_bases
CCGATGCGCATCTATGAAAGGTACTTCGCGCGTCAGATCTATCTCACGTTCATCTTTATTCTGTTTGCGTTTTCGGGTCT
GTTCTTTTTCTTCGACCTGA

Product: membrane protein, YjgP/YjgQ like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLAIMLVATLFVSILFVLTRWY
KDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGWPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFF
IEKMSPDQARVENVFVTSTENGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN
TPTTTGTPTLTLLRNPTDDNLAEFAWRAGLPLIALNLMLLAIPLAHQNPRRSRTINLVMAVLIYLTYSNLLNVVQSWIEQ
GKMSFPVGLVGLHVIVAAIVAFIFWLRVRNRPLFTRAMFSRSQGA

Sequences:

>Translated_365_residues
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLAIMLVATLFVSILFVLTRWY
KDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGWPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFF
IEKMSPDQARVENVFVTSTENGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN
TPTTTGTPTLTLLRNPTDDNLAEFAWRAGLPLIALNLMLLAIPLAHQNPRRSRTINLVMAVLIYLTYSNLLNVVQSWIEQ
GKMSFPVGLVGLHVIVAAIVAFIFWLRVRNRPLFTRAMFSRSQGA
>Mature_365_residues
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLAIMLVATLFVSILFVLTRWY
KDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGWPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFF
IEKMSPDQARVENVFVTSTENGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN
TPTTTGTPTLTLLRNPTDDNLAEFAWRAGLPLIALNLMLLAIPLAHQNPRRSRTINLVMAVLIYLTYSNLLNVVQSWIEQ
GKMSFPVGLVGLHVIVAAIVAFIFWLRVRNRPLFTRAMFSRSQGA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=367, Percent_Identity=30.2452316076294, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41188; Mature: 41188

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEECCCCCHHHHCEEEEEECC
NGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN
CCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHCEEEECCCCCC
TPTTTGTPTLTLLRNPTDDNLAEFAWRAGLPLIALNLMLLAIPLAHQNPRRSRTINLVMA
CCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRNRPLFTRAMFS
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RSQGA
CCCCC
>Mature Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEECCCCCHHHHCEEEEEECC
NGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN
CCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHCEEEECCCCCC
TPTTTGTPTLTLLRNPTDDNLAEFAWRAGLPLIALNLMLLAIPLAHQNPRRSRTINLVMA
CCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRNRPLFTRAMFS
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RSQGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]