| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782181
Identifier: 91782181
GI number: 91782181
Start: 895927
End: 897090
Strand: Direct
Name: 91782181
Synonym: Bxe_A3653
Alternate gene names: NA
Gene position: 895927-897090 (Clockwise)
Preceding gene: 91782180
Following gene: 91782182
Centisome position: 18.3
GC content: 66.24
Gene sequence:
>1164_bases GTGAGCCCCCCCTTCATCGACTCCGATGAATACGAGCGTGCCAGCGTCCGCGACCATTTCGCGAAGAATGGGGACGAGCG CGCCAGACAGCGTCGCGCCGAGCGACCGGCCGCGGGACCGCACGCGCCTGCGCCCTACGCGACGGAATCCTTGGCAGAAC TCGCCACACAGTCGCCGCCGCAGCACTGGATCGTCAAGCCGATAGCGTCGGCGTCGTCCCTGCTCGCGCTGTTCGGCGCG GCGGGCTGCGGCAAGTCATTTCTCGGTTTCGACCTCGGCGTCGCCGTCGCGGGGGCCGCCGACGAATGGTTCCATTACCG GGTTTCCCATGTGCCGGTGCTGCTGGTCGTGCTTGAGGGCGACGCCGGAATCCCGAAGCGGGCCAGGGCGTGGCACCTGG ACACAGGGAGCGACTATCCGGCACGCTTCTGGGTGCTGCGCGGACAGCCCTTTGACCTGCGCAGCCTGTCCGACATCGAC CGGCTGATCGAGGTCGCCCGGCGACTGGGCATGGCCGGAGGCCTGGTCATTGTCGATACGCTGAACCGCGCAAGCGGCGG CGCGGATGAAAACAGTTCGGCGGACGTAGGCCGGCTGATCGAGGCGTGCAAGGTCATCCAGCTTGCGCTGAGCGCAACCG TGATTCTCATCGCGCATAGCGGCAAGGATTCGAGTCGTGGCCTGCGCGGACACAGTTCGCTGTACGCGGCGCTCGATGCC GCCATCGAGGTTCGCGAATGCGACGGCGGCGTGCGGGAGTGGACCCTCGTGAAGAGCAAGGATGGATGTGACGGTCTGCG CCATACCTTCAGACTTCGGAGTGTCGAGGTCGGTGTCGACGATGACGGCGATCCGGTGACGTCCTGCGTCATCGAACCGC TCGACGCCGAACCTGAGCGGCTGCGCCCGGCGCGGCCGCGTGGCAGCGCACAGATGATTGTCTATCGCGTGGTAGGGGAC ATGCTGCGCGCGTCGCGCGAGTTCGGCAAGGCCAATGCGCCGCCAACGCACGCATGCGTACCGGTCGAGGCGGCGATCGA ACAGGCCGCATTGCATATGGTCTGCAAGGCAAAGAACCGCAGGTACGTCGCGCGGCGCACAGTCACGCACATGATTGCCA GCCGGATTTACTCCGCCAGGGACGACTGGCTATGGGCAGAATGA
Upstream 100 bases:
>100_bases TGACGCCGGTCGAATGGCACCGGAATCGTGAATGGATCACCGCGAACGTAGTCGAAGCCGCGCGCCTGTGGATGCGCGAG AAGGCGACGCGGGGTGAATT
Downstream 100 bases:
>100_bases ACCGTGTCAACAATTGCCACAACTGCCACAAAATTCAACTGCTGCGCCGCAGTGGCAAGGGTGTTGCATACAACAGATGC CACACACCCCTTTAGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Prophage Protein; Helicase; DNA Primase
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSPPFIDSDEYERASVRDHFAKNGDERARQRRAERPAAGPHAPAPYATESLAELATQSPPQHWIVKPIASASSLLALFGA AGCGKSFLGFDLGVAVAGAADEWFHYRVSHVPVLLVVLEGDAGIPKRARAWHLDTGSDYPARFWVLRGQPFDLRSLSDID RLIEVARRLGMAGGLVIVDTLNRASGGADENSSADVGRLIEACKVIQLALSATVILIAHSGKDSSRGLRGHSSLYAALDA AIEVRECDGGVREWTLVKSKDGCDGLRHTFRLRSVEVGVDDDGDPVTSCVIEPLDAEPERLRPARPRGSAQMIVYRVVGD MLRASREFGKANAPPTHACVPVEAAIEQAALHMVCKAKNRRYVARRTVTHMIASRIYSARDDWLWAE
Sequences:
>Translated_387_residues MSPPFIDSDEYERASVRDHFAKNGDERARQRRAERPAAGPHAPAPYATESLAELATQSPPQHWIVKPIASASSLLALFGA AGCGKSFLGFDLGVAVAGAADEWFHYRVSHVPVLLVVLEGDAGIPKRARAWHLDTGSDYPARFWVLRGQPFDLRSLSDID RLIEVARRLGMAGGLVIVDTLNRASGGADENSSADVGRLIEACKVIQLALSATVILIAHSGKDSSRGLRGHSSLYAALDA AIEVRECDGGVREWTLVKSKDGCDGLRHTFRLRSVEVGVDDDGDPVTSCVIEPLDAEPERLRPARPRGSAQMIVYRVVGD MLRASREFGKANAPPTHACVPVEAAIEQAALHMVCKAKNRRYVARRTVTHMIASRIYSARDDWLWAE >Mature_386_residues SPPFIDSDEYERASVRDHFAKNGDERARQRRAERPAAGPHAPAPYATESLAELATQSPPQHWIVKPIASASSLLALFGAA GCGKSFLGFDLGVAVAGAADEWFHYRVSHVPVLLVVLEGDAGIPKRARAWHLDTGSDYPARFWVLRGQPFDLRSLSDIDR LIEVARRLGMAGGLVIVDTLNRASGGADENSSADVGRLIEACKVIQLALSATVILIAHSGKDSSRGLRGHSSLYAALDAA IEVRECDGGVREWTLVKSKDGCDGLRHTFRLRSVEVGVDDDGDPVTSCVIEPLDAEPERLRPARPRGSAQMIVYRVVGDM LRASREFGKANAPPTHACVPVEAAIEQAALHMVCKAKNRRYVARRTVTHMIASRIYSARDDWLWAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42115; Mature: 41984
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPFIDSDEYERASVRDHFAKNGDERARQRRAERPAAGPHAPAPYATESLAELATQSPP CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC QHWIVKPIASASSLLALFGAAGCGKSFLGFDLGVAVAGAADEWFHYRVSHVPVLLVVLEG CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCHHHHHHHHCCCEEEEEEEEC DAGIPKRARAWHLDTGSDYPARFWVLRGQPFDLRSLSDIDRLIEVARRLGMAGGLVIVDT CCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE LNRASGGADENSSADVGRLIEACKVIQLALSATVILIAHSGKDSSRGLRGHSSLYAALDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHH AIEVRECDGGVREWTLVKSKDGCDGLRHTFRLRSVEVGVDDDGDPVTSCVIEPLDAEPER HHEEECCCCCCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCHHH LRPARPRGSAQMIVYRVVGDMLRASREFGKANAPPTHACVPVEAAIEQAALHMVCKAKNR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC RYVARRTVTHMIASRIYSARDDWLWAE HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SPPFIDSDEYERASVRDHFAKNGDERARQRRAERPAAGPHAPAPYATESLAELATQSPP CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC QHWIVKPIASASSLLALFGAAGCGKSFLGFDLGVAVAGAADEWFHYRVSHVPVLLVVLEG CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCHHHHHHHHCCCEEEEEEEEC DAGIPKRARAWHLDTGSDYPARFWVLRGQPFDLRSLSDIDRLIEVARRLGMAGGLVIVDT CCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE LNRASGGADENSSADVGRLIEACKVIQLALSATVILIAHSGKDSSRGLRGHSSLYAALDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHH AIEVRECDGGVREWTLVKSKDGCDGLRHTFRLRSVEVGVDDDGDPVTSCVIEPLDAEPER HHEEECCCCCCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCHHH LRPARPRGSAQMIVYRVVGDMLRASREFGKANAPPTHACVPVEAAIEQAALHMVCKAKNR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC RYVARRTVTHMIASRIYSARDDWLWAE HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA