| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782163
Identifier: 91782163
GI number: 91782163
Start: 878278
End: 879327
Strand: Direct
Name: 91782163
Synonym: Bxe_A3672
Alternate gene names: NA
Gene position: 878278-879327 (Clockwise)
Preceding gene: 91782162
Following gene: 91782164
Centisome position: 17.94
GC content: 63.62
Gene sequence:
>1050_bases ATGAAAACCATCCAGGGCCCGGCCATCTTTCTCGCTCAGTTCATGGGCGACGAAGTGCCGTTCGACAATCTCGCGCATCT GGCCGAATGGGCTGCGGGTCTCGGCTTCAAAGGGATTCAGGTGCCGTGCGACAGCCGCCTGATCGATCTCGAACAGGCGG CGTCGAGCCAGACCTATTGCGACGAGTTGCGCGAGACCGTGGACGACGCCGGCGTGACGATCACCGAATTGTCGACGCAT CTGCAAGGACAGCTCGTCGCCGTGCACCCGGCCTATGACGCGCTGTTCGACGGCTTTGCCGCGCCGCAGGTGCGAGGCGA TCCCGCCGCGCGCACGCAGTGGGCGATCGAGCAGATGAAGCTCGCGGCGAAGGCTTCGCAGCGGTTGGGCTTGAGCACGC ACGTGTCGTTTTCCGGAGCGCTGGCGTGGCCCTATCTGTATCCGTGGCCGCAGCGTCCGGCCGGTCTCGTGGAAGCCGCA TTCGACGAACTCGCGCGCCGCTGGACGCCGATTCTCGACGCGTTCGACGCAGCCGGCGTGGACGTGTGCTACGAACTGCA TCCGGGTGAAGACCTGCACGACGGCGTGACCTTCGAGCGTTTTCTCGATGCGGTCAAACAGCATGCGCGCGCCAACATCC TCTACGATCCGAGTCATTTCGTGTTGCAGCAACTCGACTACCTCGCGTTTATCGACATCTATCACGAACGCATCAAGGCG TTTCATGTGAAGGACGCGGAGTTTCGTCCGACCGGCAAACAGGGCGTGTACGGCGGCTACAGCGGTTGGGTCGAACGTGC GGGGCGGTTCCGCTCGCTCGGCGACGGGCAGATCGATTTCGGCGCGATCTTCTCGAAGATGGCGCAATACGATTTCCCCG GCTGGGCCGTGCTCGAATGGGAATGCGCGCTGAAGCATCCGCACGACGGCGCGCGCGAAGGCGCGGAGTTCATTCGCCGG CACATCATCCGCGTGGCCGAGCATGCATTCGACGATTTCGCGGGAAGCGGCGTGGACGCCGCGCAGTTGAAACGCGTGCT CGGCATCTGA
Upstream 100 bases:
>100_bases TCCCGGACTCGCCGTTCTGATCCCAGCATCCGGGGCGCGCCTGCCTGATTCCGGTCAGTGGGCCGCGCGGCGGGCGCGCC CCCGTTCGAGGAACCGTACG
Downstream 100 bases:
>100_bases CGGCAATCAGGCGCATAGGAGTAAGAGCGATGTCACAACGAAGGCTCAGGCTAGGGATGGTCGGCGGCGGACAGGGCGCG TTCATCGGCGCGGTACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase-Like Protein; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein Tim Barrel; Iole Protein; AP Endonuclease; Endonuclease IV; Apurinic/Apyrimidinic Endonuclease; Endonuclease; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; IolE-Like Protein; Xylose Isomerase-Like; Xylose Isomerase-Like TIM Barrel Family Protein; Xylose Isomerase/Endonuclease Family Protein; Sugar Phosphate Isomerase/Epimerase IolE; Inosose Dehydratase; IolE Protein; AP Endonuclease Family 2 C Terminus Family; Xlose Isomerase Domain-Containing Protein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAASSQTYCDELRETVDDAGVTITELSTH LQGQLVAVHPAYDALFDGFAAPQVRGDPAARTQWAIEQMKLAAKASQRLGLSTHVSFSGALAWPYLYPWPQRPAGLVEAA FDELARRWTPILDAFDAAGVDVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFIDIYHERIKA FHVKDAEFRPTGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDFPGWAVLEWECALKHPHDGAREGAEFIRR HIIRVAEHAFDDFAGSGVDAAQLKRVLGI
Sequences:
>Translated_349_residues MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAASSQTYCDELRETVDDAGVTITELSTH LQGQLVAVHPAYDALFDGFAAPQVRGDPAARTQWAIEQMKLAAKASQRLGLSTHVSFSGALAWPYLYPWPQRPAGLVEAA FDELARRWTPILDAFDAAGVDVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFIDIYHERIKA FHVKDAEFRPTGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDFPGWAVLEWECALKHPHDGAREGAEFIRR HIIRVAEHAFDDFAGSGVDAAQLKRVLGI >Mature_349_residues MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAASSQTYCDELRETVDDAGVTITELSTH LQGQLVAVHPAYDALFDGFAAPQVRGDPAARTQWAIEQMKLAAKASQRLGLSTHVSFSGALAWPYLYPWPQRPAGLVEAA FDELARRWTPILDAFDAAGVDVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFIDIYHERIKA FHVKDAEFRPTGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDFPGWAVLEWECALKHPHDGAREGAEFIRR HIIRVAEHAFDDFAGSGVDAAQLKRVLGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38763; Mature: 38763
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAASSQTYC CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHH DELRETVDDAGVTITELSTHLQGQLVAVHPAYDALFDGFAAPQVRGDPAARTQWAIEQMK HHHHHHHHHHCCCHHHHHHHHCCCEEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LAAKASQRLGLSTHVSFSGALAWPYLYPWPQRPAGLVEAAFDELARRWTPILDAFDAAGV HHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFIDIYHERIKA EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHH FHVKDAEFRPTGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDFPGWAVLEW HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE ECALKHPHDGAREGAEFIRRHIIRVAEHAFDDFAGSGVDAAQLKRVLGI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAASSQTYC CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHH DELRETVDDAGVTITELSTHLQGQLVAVHPAYDALFDGFAAPQVRGDPAARTQWAIEQMK HHHHHHHHHHCCCHHHHHHHHCCCEEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LAAKASQRLGLSTHVSFSGALAWPYLYPWPQRPAGLVEAAFDELARRWTPILDAFDAAGV HHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFIDIYHERIKA EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHH FHVKDAEFRPTGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDFPGWAVLEW HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE ECALKHPHDGAREGAEFIRRHIIRVAEHAFDDFAGSGVDAAQLKRVLGI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA